Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0924

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
1,057,169	+		Echvi_0923	0.26	-2.0
1,057,169	+		Echvi_0923	0.26	-0.4
1,057,169	+		Echvi_0923	0.26	+1.0
1,057,170	-				+0.0
1,057,181	-		Echvi_0923	0.27	-0.7
1,057,181	-		Echvi_0923	0.27	+0.9
1,057,210	+		Echvi_0923	0.30	-0.8
1,057,210	+		Echvi_0923	0.30	-1.0
1,057,253	-		Echvi_0923	0.34	-0.5
1,057,262	-		Echvi_0923	0.35	-1.7
1,057,318	-		Echvi_0923	0.40	-0.7
1,057,520	+		Echvi_0923	0.59	+0.4
1,057,520	+		Echvi_0923	0.59	-1.3
1,057,521	-		Echvi_0923	0.59	+0.4
1,057,522	+		Echvi_0923	0.60	+0.1
1,057,541	+		Echvi_0923	0.61	+0.5
1,057,542	-		Echvi_0923	0.61	-0.3
1,057,542	-		Echvi_0923	0.61	-0.1
1,057,600	+		Echvi_0923	0.67	-1.7
1,057,600	+		Echvi_0923	0.67	-0.1
1,057,600	+		Echvi_0923	0.67	+0.2
1,057,600	+		Echvi_0923	0.67	-0.8
1,057,601	-		Echvi_0923	0.67	+0.1
1,057,626	+		Echvi_0923	0.69	+0.7
1,057,627	-		Echvi_0923	0.70	-1.0
1,057,720	+		Echvi_0923	0.78	+0.1
1,057,720	+		Echvi_0923	0.78	-1.7
1,057,720	+		Echvi_0923	0.78	+0.7
1,057,720	+		Echvi_0923	0.78	+0.3
1,057,726	+		Echvi_0923	0.79	+1.4
1,057,814	-		Echvi_0923	0.87	-0.4
1,057,835	-		Echvi_0923	0.89	+1.0
1,057,888	-				+0.5
1,057,932	+				-2.2
1,057,974	-				-0.7
1,058,014	-				-1.0
1,058,014	-				+1.0
1,058,019	-				+0.6
1,058,024	-				+0.9
1,058,033	+				-0.0
1,058,033	+				+1.3
1,058,033	+				-1.6
1,058,037	+				-1.9
1,058,037	+				-1.2
1,058,042	+				+0.7
1,058,114	+				-0.5
1,058,122	-				-0.2
1,058,127	+				-1.2
1,058,128	-				-0.2
1,058,136	+				+0.2
1,058,288	+		Echvi_0924	0.12	+0.0
1,058,434	+		Echvi_0924	0.24	-0.4
1,058,434	+		Echvi_0924	0.24	-0.4
1,058,435	-		Echvi_0924	0.25	-2.0
1,058,488	+		Echvi_0924	0.29	-0.5
1,058,488	+		Echvi_0924	0.29	+0.0
1,058,488	+		Echvi_0924	0.29	-2.5
1,058,489	-		Echvi_0924	0.29	+0.5
1,058,489	-		Echvi_0924	0.29	+0.2
1,058,506	+		Echvi_0924	0.31	+1.0
1,058,521	-		Echvi_0924	0.32	+0.6
1,058,535	+		Echvi_0924	0.33	-1.8
1,058,560	+		Echvi_0924	0.35	-2.2
1,058,560	+		Echvi_0924	0.35	-1.2
1,058,567	+		Echvi_0924	0.36	+1.5
1,058,625	+		Echvi_0924	0.41	-0.4
1,058,625	+		Echvi_0924	0.41	-1.0
1,058,626	-		Echvi_0924	0.41	-0.1
1,058,662	+		Echvi_0924	0.44	-0.2
1,058,663	-		Echvi_0924	0.44	+1.2
1,058,699	-		Echvi_0924	0.48	+0.2
1,058,706	+		Echvi_0924	0.48	+0.0
1,058,707	-		Echvi_0924	0.48	-0.7
1,058,727	+		Echvi_0924	0.50	+0.2
1,058,727	+		Echvi_0924	0.50	+1.0
1,058,728	-		Echvi_0924	0.50	-0.1
1,058,898	+		Echvi_0924	0.65	+1.1
1,058,900	+		Echvi_0924	0.65	-0.5
1,058,900	+		Echvi_0924	0.65	+1.3
1,058,901	-		Echvi_0924	0.65	+0.2
1,058,901	-		Echvi_0924	0.65	+1.3
1,058,909	+		Echvi_0924	0.66	-1.5
1,058,909	+		Echvi_0924	0.66	-1.5
1,058,909	+		Echvi_0924	0.66	-0.7
1,058,909	+		Echvi_0924	0.66	+0.9
1,058,909	+		Echvi_0924	0.66	+0.7
1,058,909	+		Echvi_0924	0.66	-1.0
1,058,910	-		Echvi_0924	0.66	-0.8
1,058,910	-		Echvi_0924	0.66	+1.1
1,058,910	-		Echvi_0924	0.66	-0.5
1,058,910	-		Echvi_0924	0.66	+0.0
1,058,910	-		Echvi_0924	0.66	-0.4
1,058,910	-		Echvi_0924	0.66	-0.4
1,058,910	-		Echvi_0924	0.66	-0.0
1,058,938	-		Echvi_0924	0.68	+0.4
1,058,943	+		Echvi_0924	0.69	-1.0
1,058,955	+		Echvi_0924	0.70	-0.3
1,058,956	-		Echvi_0924	0.70	-1.2
1,059,076	+		Echvi_0924	0.80	-1.0
1,059,076	+		Echvi_0924	0.80	+0.9
1,059,076	+		Echvi_0924	0.80	-0.7
1,059,077	-		Echvi_0924	0.81	+0.3
1,059,106	+		Echvi_0924	0.83	+0.7
1,059,106	+		Echvi_0924	0.83	-0.1
1,059,107	-		Echvi_0924	0.83	+0.1
1,059,107	-		Echvi_0924	0.83	+0.8
1,059,220	-				-1.0
1,059,220	-				+0.6
1,059,279	+				+0.2
1,059,279	+				-0.8
1,059,279	+				-1.1
1,059,279	+				-1.3
1,059,279	+				+0.0
1,059,279	+				-1.3
1,059,280	-				-0.7
1,059,280	-				-1.0
1,059,280	-				-1.0
1,059,280	-				-1.3
1,059,280	-				-1.2
1,059,282	+				-0.2
1,059,283	-				+2.1
1,059,283	-				-0.7
1,059,302	+				-1.3
1,059,336	+				-1.7
1,059,336	+				+0.3
1,059,345	+				-1.4
1,059,345	+				+0.2
1,059,346	-				-0.2
1,059,346	-				+1.0
1,059,346	-				-0.3
1,059,346	-				-0.8
1,059,346	-				-1.3
1,059,490	+				+0.7
1,059,490	+				+0.0
1,059,505	+				-1.6
1,059,517	+				+0.3
1,059,517	+				-2.2
1,059,525	+				+0.3
1,059,571	+				+0.5
1,059,572	-				-0.7
1,059,621	+				+1.5
1,059,621	+				-0.8
1,059,622	-				-0.3
1,059,623	+				+0.7
1,059,623	+				-0.8
1,059,623	+				-1.0
1,059,624	-				-0.8
1,059,625	+				+2.7
1,059,625	+				-0.6
1,059,625	+				+2.4
1,059,625	+				+1.6
1,059,625	+				+2.0
1,059,626	-				-0.2
1,059,635	+				+0.0
1,059,655	+				+1.3
1,059,655	+				-0.4
1,059,670	+				-1.6
1,059,670	+				-0.5
1,059,670	+				-1.2
1,059,671	-				-0.3
1,059,671	-				-0.8
1,059,671	-				-0.8
1,059,763	+		Echvi_0925	0.15	+0.2
1,059,763	+		Echvi_0925	0.15	+0.1
1,059,764	-		Echvi_0925	0.15	+0.7
1,059,771	-		Echvi_0925	0.16	+2.0
1,059,799	+		Echvi_0925	0.18	+0.1
1,059,812	+		Echvi_0925	0.19	-0.1
1,059,812	+		Echvi_0925	0.19	-0.4
1,059,812	+		Echvi_0925	0.19	-0.2
1,059,813	-		Echvi_0925	0.19	+1.3
1,059,813	-		Echvi_0925	0.19	-2.3
1,059,846	+		Echvi_0925	0.21	-0.2
1,059,846	+		Echvi_0925	0.21	+0.2
1,059,846	+		Echvi_0925	0.21	-0.5
1,059,847	-		Echvi_0925	0.21	+0.3
1,059,925	+		Echvi_0925	0.26	+0.1
1,059,926	-		Echvi_0925	0.26	+0.4
1,059,927	+		Echvi_0925	0.26	-0.5
1,059,927	+		Echvi_0925	0.26	+0.1
1,059,927	+		Echvi_0925	0.26	+0.8
1,059,927	+		Echvi_0925	0.26	-0.7
1,059,928	-		Echvi_0925	0.26	-0.1
1,059,982	-		Echvi_0925	0.29	-2.8
1,059,987	+		Echvi_0925	0.30	+0.1
1,060,004	+		Echvi_0925	0.31	-1.1
1,060,004	+		Echvi_0925	0.31	-2.1
1,060,005	-		Echvi_0925	0.31	-2.1
1,060,005	-		Echvi_0925	0.31	-2.1
1,060,027	+		Echvi_0925	0.32	-2.0
1,060,028	-		Echvi_0925	0.32	+0.5
1,060,028	-		Echvi_0925	0.32	+0.1
1,060,028	-		Echvi_0925	0.32	+0.0
1,060,028	-		Echvi_0925	0.32	+1.4
1,060,161	+		Echvi_0925	0.41	-1.7
1,060,241	+		Echvi_0925	0.46	-1.2
1,060,242	-		Echvi_0925	0.46	-1.1
1,060,266	+		Echvi_0925	0.47	+0.7
1,060,282	+		Echvi_0925	0.48	+2.0
1,060,282	+		Echvi_0925	0.48	+0.4
1,060,282	+		Echvi_0925	0.48	+1.2
1,060,283	-		Echvi_0925	0.48	+0.6
1,060,283	-		Echvi_0925	0.48	-0.3