Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21400 and CA264_21405 are separated by 116 nucleotides CA264_21405 and CA264_21410 overlap by 4 nucleotides CA264_21410 and CA264_21415 are separated by 121 nucleotides
CA264_21400: CA264_21400 - hypothetical protein, at 143,448 to 145,292
_21400
CA264_21405: CA264_21405 - hypothetical protein, at 145,409 to 146,134
_21405
CA264_21410: CA264_21410 - hypothetical protein, at 146,131 to 147,102
_21410
CA264_21415: CA264_21415 - IS256 family transposase, at 147,224 to 148,429
_21415
Position (kb) 146
147
148 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 145.191 kb on - strand at 145.199 kb on + strand at 145.200 kb on - strand at 145.214 kb on - strand at 145.255 kb on + strand at 145.276 kb on + strand at 145.357 kb on + strand at 145.358 kb on - strand at 145.364 kb on - strand at 145.374 kb on + strand at 146.209 kb on + strand at 146.209 kb on + strand at 146.210 kb on - strand at 146.210 kb on - strand at 146.314 kb on + strand at 146.314 kb on + strand, within CA264_21410 at 146.445 kb on - strand, within CA264_21410 at 146.525 kb on - strand, within CA264_21410 at 146.601 kb on + strand, within CA264_21410 at 146.623 kb on - strand, within CA264_21410 at 146.681 kb on + strand, within CA264_21410 at 146.688 kb on - strand, within CA264_21410 at 146.732 kb on + strand, within CA264_21410 at 146.732 kb on + strand, within CA264_21410 at 146.732 kb on + strand, within CA264_21410 at 146.768 kb on + strand, within CA264_21410 at 146.772 kb on + strand, within CA264_21410 at 146.789 kb on + strand, within CA264_21410 at 146.789 kb on + strand, within CA264_21410 at 146.790 kb on - strand, within CA264_21410 at 146.790 kb on - strand, within CA264_21410 at 146.790 kb on - strand, within CA264_21410 at 146.790 kb on - strand, within CA264_21410 at 146.790 kb on - strand, within CA264_21410 at 146.791 kb on + strand, within CA264_21410 at 146.791 kb on + strand, within CA264_21410 at 146.792 kb on - strand, within CA264_21410 at 146.792 kb on - strand, within CA264_21410 at 146.989 kb on + strand, within CA264_21410 at 146.990 kb on - strand, within CA264_21410 at 147.048 kb on + strand at 147.049 kb on - strand at 147.052 kb on - strand at 147.052 kb on - strand at 147.076 kb on - strand at 147.100 kb on + strand at 147.100 kb on + strand at 147.101 kb on - strand at 147.101 kb on - strand at 147.103 kb on + strand at 147.104 kb on - strand at 147.107 kb on + strand at 147.108 kb on - strand at 147.108 kb on - strand at 147.162 kb on + strand at 147.162 kb on + strand at 147.162 kb on + strand at 147.163 kb on - strand at 147.163 kb on - strand at 147.168 kb on + strand at 147.169 kb on - strand at 147.202 kb on + strand at 147.225 kb on + strand at 147.225 kb on + strand at 147.226 kb on - strand at 147.269 kb on - strand at 147.429 kb on + strand, within CA264_21415 at 147.430 kb on - strand, within CA264_21415 at 147.510 kb on + strand, within CA264_21415 at 147.511 kb on - strand, within CA264_21415 at 147.511 kb on - strand, within CA264_21415 at 147.517 kb on - strand, within CA264_21415 at 147.636 kb on + strand, within CA264_21415 at 147.948 kb on + strand, within CA264_21415 at 147.948 kb on + strand, within CA264_21415 at 148.045 kb on - strand, within CA264_21415
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 145,191 - +0.3 145,199 + -1.0 145,200 - +0.1 145,214 - -0.9 145,255 + -3.4 145,276 + +0.0 145,357 + +1.0 145,358 - -1.0 145,364 - -1.6 145,374 + -0.6 146,209 + +0.4 146,209 + +0.2 146,210 - +0.8 146,210 - +0.1 146,314 + +0.4 146,314 + CA264_21410 0.19 +0.3 146,445 - CA264_21410 0.32 -0.7 146,525 - CA264_21410 0.41 +0.4 146,601 + CA264_21410 0.48 -0.7 146,623 - CA264_21410 0.51 +0.1 146,681 + CA264_21410 0.57 -0.6 146,688 - CA264_21410 0.57 -0.1 146,732 + CA264_21410 0.62 -0.1 146,732 + CA264_21410 0.62 +0.7 146,732 + CA264_21410 0.62 -0.4 146,768 + CA264_21410 0.66 +0.0 146,772 + CA264_21410 0.66 -0.3 146,789 + CA264_21410 0.68 +0.7 146,789 + CA264_21410 0.68 -0.5 146,790 - CA264_21410 0.68 +2.0 146,790 - CA264_21410 0.68 +0.1 146,790 - CA264_21410 0.68 -0.7 146,790 - CA264_21410 0.68 +1.1 146,790 - CA264_21410 0.68 +1.5 146,791 + CA264_21410 0.68 +0.3 146,791 + CA264_21410 0.68 -0.2 146,792 - CA264_21410 0.68 +1.3 146,792 - CA264_21410 0.68 -0.1 146,989 + CA264_21410 0.88 +0.5 146,990 - CA264_21410 0.88 +1.2 147,048 + -0.6 147,049 - +0.7 147,052 - -0.6 147,052 - +0.5 147,076 - -1.0 147,100 + +1.1 147,100 + +0.2 147,101 - +1.9 147,101 - +0.4 147,103 + -0.2 147,104 - +0.3 147,107 + -0.6 147,108 - -0.7 147,108 - +1.4 147,162 + +0.4 147,162 + -1.2 147,162 + -1.1 147,163 - -1.1 147,163 - -0.2 147,168 + +0.9 147,169 - -0.4 147,202 + -0.3 147,225 + +0.6 147,225 + +0.5 147,226 - +0.4 147,269 - -0.4 147,429 + CA264_21415 0.17 -1.2 147,430 - CA264_21415 0.17 -0.4 147,510 + CA264_21415 0.24 +0.9 147,511 - CA264_21415 0.24 -0.1 147,511 - CA264_21415 0.24 -0.5 147,517 - CA264_21415 0.24 -0.0 147,636 + CA264_21415 0.34 -1.0 147,948 + CA264_21415 0.60 +0.8 147,948 + CA264_21415 0.60 +0.7 148,045 - CA264_21415 0.68 -0.3
Or see this region's nucleotide sequence