Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21260 and CA264_21265 overlap by 40 nucleotides CA264_21265 and CA264_21270 are separated by 4 nucleotides
CA264_21260: CA264_21260 - cation transporter, at 115,241 to 119,065
_21260
CA264_21265: CA264_21265 - hypothetical protein, at 119,026 to 120,348
_21265
CA264_21270: CA264_21270 - hypothetical protein, at 120,353 to 122,167
_21270
Position (kb)
119
120
121 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 118.032 kb on + strand, within CA264_21260 at 118.033 kb on - strand, within CA264_21260 at 118.112 kb on - strand, within CA264_21260 at 118.171 kb on + strand, within CA264_21260 at 118.204 kb on + strand, within CA264_21260 at 118.205 kb on - strand, within CA264_21260 at 118.249 kb on - strand, within CA264_21260 at 118.249 kb on - strand, within CA264_21260 at 118.253 kb on + strand, within CA264_21260 at 118.288 kb on + strand, within CA264_21260 at 118.293 kb on - strand, within CA264_21260 at 118.293 kb on - strand, within CA264_21260 at 118.416 kb on + strand, within CA264_21260 at 118.421 kb on + strand, within CA264_21260 at 118.422 kb on - strand at 118.422 kb on - strand, within CA264_21260 at 118.422 kb on - strand, within CA264_21260 at 118.422 kb on - strand, within CA264_21260 at 118.422 kb on - strand, within CA264_21260 at 118.452 kb on + strand, within CA264_21260 at 118.490 kb on - strand, within CA264_21260 at 118.513 kb on - strand, within CA264_21260 at 118.518 kb on - strand, within CA264_21260 at 118.537 kb on - strand, within CA264_21260 at 118.592 kb on - strand, within CA264_21260 at 118.652 kb on - strand, within CA264_21260 at 118.729 kb on - strand at 118.808 kb on - strand at 119.003 kb on + strand at 119.079 kb on + strand at 119.080 kb on - strand at 119.221 kb on + strand, within CA264_21265 at 119.222 kb on - strand, within CA264_21265 at 119.471 kb on - strand, within CA264_21265 at 119.471 kb on - strand, within CA264_21265 at 119.483 kb on - strand, within CA264_21265 at 119.486 kb on - strand, within CA264_21265 at 119.560 kb on + strand, within CA264_21265 at 119.624 kb on + strand, within CA264_21265 at 119.625 kb on - strand, within CA264_21265 at 119.625 kb on - strand, within CA264_21265 at 119.636 kb on + strand, within CA264_21265 at 119.878 kb on - strand, within CA264_21265 at 119.883 kb on - strand, within CA264_21265 at 119.893 kb on + strand, within CA264_21265 at 119.894 kb on - strand, within CA264_21265 at 119.998 kb on + strand, within CA264_21265 at 120.311 kb on - strand at 120.346 kb on + strand at 120.346 kb on + strand at 120.607 kb on - strand, within CA264_21270 at 120.657 kb on + strand, within CA264_21270 at 120.673 kb on + strand, within CA264_21270 at 120.674 kb on - strand, within CA264_21270 at 120.685 kb on - strand, within CA264_21270 at 120.686 kb on + strand, within CA264_21270 at 120.687 kb on - strand, within CA264_21270 at 120.703 kb on - strand, within CA264_21270 at 120.703 kb on - strand, within CA264_21270 at 120.732 kb on + strand, within CA264_21270 at 120.733 kb on - strand, within CA264_21270 at 120.733 kb on - strand, within CA264_21270 at 120.755 kb on - strand, within CA264_21270 at 120.818 kb on - strand, within CA264_21270 at 120.818 kb on - strand, within CA264_21270 at 120.820 kb on - strand, within CA264_21270 at 120.820 kb on - strand, within CA264_21270 at 120.820 kb on - strand, within CA264_21270 at 120.820 kb on - strand, within CA264_21270 at 120.822 kb on - strand, within CA264_21270 at 120.987 kb on + strand, within CA264_21270 at 120.988 kb on - strand, within CA264_21270 at 120.995 kb on + strand, within CA264_21270 at 121.047 kb on - strand, within CA264_21270 at 121.047 kb on - strand, within CA264_21270 at 121.047 kb on - strand, within CA264_21270 at 121.047 kb on - strand, within CA264_21270 at 121.051 kb on - strand, within CA264_21270 at 121.116 kb on - strand, within CA264_21270 at 121.155 kb on + strand, within CA264_21270 at 121.205 kb on - strand, within CA264_21270 at 121.235 kb on - strand, within CA264_21270 at 121.294 kb on + strand, within CA264_21270 at 121.295 kb on - strand, within CA264_21270
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 118,032 + CA264_21260 0.73 -0.4 118,033 - CA264_21260 0.73 -1.2 118,112 - CA264_21260 0.75 -0.3 118,171 + CA264_21260 0.77 -2.7 118,204 + CA264_21260 0.77 -0.1 118,205 - CA264_21260 0.77 -0.1 118,249 - CA264_21260 0.79 -0.1 118,249 - CA264_21260 0.79 -1.1 118,253 + CA264_21260 0.79 +0.5 118,288 + CA264_21260 0.80 -0.4 118,293 - CA264_21260 0.80 -1.7 118,293 - CA264_21260 0.80 +0.4 118,416 + CA264_21260 0.83 -1.4 118,421 + CA264_21260 0.83 +1.3 118,422 - +1.1 118,422 - CA264_21260 0.83 -1.0 118,422 - CA264_21260 0.83 -0.1 118,422 - CA264_21260 0.83 -1.5 118,422 - CA264_21260 0.83 +1.9 118,452 + CA264_21260 0.84 -0.5 118,490 - CA264_21260 0.85 +1.0 118,513 - CA264_21260 0.86 +1.7 118,518 - CA264_21260 0.86 +0.1 118,537 - CA264_21260 0.86 +0.6 118,592 - CA264_21260 0.88 +1.9 118,652 - CA264_21260 0.89 -0.5 118,729 - +1.7 118,808 - +0.0 119,003 + +0.2 119,079 + +0.3 119,080 - +1.6 119,221 + CA264_21265 0.15 +0.5 119,222 - CA264_21265 0.15 -0.4 119,471 - CA264_21265 0.34 +0.4 119,471 - CA264_21265 0.34 +0.5 119,483 - CA264_21265 0.35 +0.2 119,486 - CA264_21265 0.35 +2.0 119,560 + CA264_21265 0.40 +0.7 119,624 + CA264_21265 0.45 -0.4 119,625 - CA264_21265 0.45 -0.6 119,625 - CA264_21265 0.45 +0.5 119,636 + CA264_21265 0.46 -1.2 119,878 - CA264_21265 0.64 -0.9 119,883 - CA264_21265 0.65 +1.8 119,893 + CA264_21265 0.66 +0.7 119,894 - CA264_21265 0.66 +1.3 119,998 + CA264_21265 0.73 -0.1 120,311 - +0.9 120,346 + -0.3 120,346 + -0.1 120,607 - CA264_21270 0.14 +0.4 120,657 + CA264_21270 0.17 -0.2 120,673 + CA264_21270 0.18 -0.3 120,674 - CA264_21270 0.18 +0.6 120,685 - CA264_21270 0.18 -0.4 120,686 + CA264_21270 0.18 +1.0 120,687 - CA264_21270 0.18 +1.2 120,703 - CA264_21270 0.19 -0.3 120,703 - CA264_21270 0.19 -1.2 120,732 + CA264_21270 0.21 -0.4 120,733 - CA264_21270 0.21 -1.6 120,733 - CA264_21270 0.21 +0.7 120,755 - CA264_21270 0.22 +1.7 120,818 - CA264_21270 0.26 -1.1 120,818 - CA264_21270 0.26 +0.6 120,820 - CA264_21270 0.26 -0.3 120,820 - CA264_21270 0.26 -2.3 120,820 - CA264_21270 0.26 +0.4 120,820 - CA264_21270 0.26 +0.7 120,822 - CA264_21270 0.26 -0.8 120,987 + CA264_21270 0.35 -2.1 120,988 - CA264_21270 0.35 +0.6 120,995 + CA264_21270 0.35 -0.7 121,047 - CA264_21270 0.38 +0.7 121,047 - CA264_21270 0.38 -1.2 121,047 - CA264_21270 0.38 -0.4 121,047 - CA264_21270 0.38 -0.9 121,051 - CA264_21270 0.38 -0.2 121,116 - CA264_21270 0.42 -1.7 121,155 + CA264_21270 0.44 -0.5 121,205 - CA264_21270 0.47 -0.2 121,235 - CA264_21270 0.49 -0.1 121,294 + CA264_21270 0.52 +0.0 121,295 - CA264_21270 0.52 +1.2
Or see this region's nucleotide sequence