Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20630 and CA264_20635 are separated by 70 nucleotides CA264_20635 and CA264_20640 overlap by 4 nucleotides CA264_20640 and CA264_20645 are separated by 106 nucleotides
CA264_20630: CA264_20630 - hypothetical protein, at 4,750,466 to 4,751,314
_20630
CA264_20635: CA264_20635 - thioredoxin family protein, at 4,751,385 to 4,751,966
_20635
CA264_20640: CA264_20640 - 4-phosphopantetheinyl transferase, at 4,751,963 to 4,752,628
_20640
CA264_20645: CA264_20645 - hypothetical protein, at 4,752,735 to 4,753,661
_20645
Position (kb) 4751
4752 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4750.396 kb on + strand at 4750.397 kb on - strand at 4750.406 kb on + strand at 4750.407 kb on - strand at 4750.453 kb on + strand at 4750.462 kb on + strand at 4750.462 kb on + strand at 4750.464 kb on + strand at 4750.724 kb on + strand, within CA264_20630 at 4750.739 kb on + strand, within CA264_20630 at 4750.794 kb on - strand, within CA264_20630 at 4750.794 kb on - strand, within CA264_20630 at 4750.835 kb on + strand, within CA264_20630 at 4750.845 kb on + strand, within CA264_20630 at 4750.846 kb on - strand, within CA264_20630 at 4750.983 kb on - strand, within CA264_20630 at 4751.050 kb on + strand, within CA264_20630 at 4751.051 kb on - strand, within CA264_20630 at 4751.051 kb on - strand, within CA264_20630 at 4751.054 kb on + strand, within CA264_20630 at 4751.054 kb on + strand, within CA264_20630 at 4751.054 kb on + strand, within CA264_20630 at 4751.055 kb on - strand, within CA264_20630 at 4751.055 kb on - strand, within CA264_20630 at 4751.057 kb on - strand, within CA264_20630 at 4751.091 kb on - strand, within CA264_20630 at 4751.105 kb on - strand, within CA264_20630 at 4751.106 kb on + strand, within CA264_20630 at 4751.132 kb on + strand, within CA264_20630 at 4751.132 kb on + strand, within CA264_20630 at 4751.132 kb on + strand, within CA264_20630 at 4751.133 kb on - strand, within CA264_20630 at 4751.133 kb on - strand, within CA264_20630 at 4751.133 kb on - strand, within CA264_20630 at 4751.200 kb on - strand, within CA264_20630 at 4751.287 kb on + strand at 4751.313 kb on - strand at 4751.313 kb on - strand at 4751.313 kb on - strand at 4751.386 kb on + strand at 4751.386 kb on + strand at 4751.386 kb on + strand at 4751.386 kb on + strand at 4751.389 kb on + strand at 4751.479 kb on + strand, within CA264_20635 at 4751.640 kb on - strand, within CA264_20635 at 4751.642 kb on - strand, within CA264_20635 at 4751.985 kb on - strand at 4752.636 kb on - strand at 4752.664 kb on + strand at 4752.684 kb on + strand at 4752.685 kb on - strand at 4752.700 kb on - strand at 4752.721 kb on - strand at 4752.727 kb on + strand at 4752.748 kb on + strand at 4752.755 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 4,750,396 + -0.1 4,750,397 - +0.5 4,750,406 + -0.1 4,750,407 - -0.4 4,750,453 + +0.4 4,750,462 + +1.0 4,750,462 + -0.2 4,750,464 + -1.3 4,750,724 + CA264_20630 0.30 -0.4 4,750,739 + CA264_20630 0.32 -0.3 4,750,794 - CA264_20630 0.39 +0.7 4,750,794 - CA264_20630 0.39 -0.3 4,750,835 + CA264_20630 0.43 +0.8 4,750,845 + CA264_20630 0.45 -0.9 4,750,846 - CA264_20630 0.45 -0.5 4,750,983 - CA264_20630 0.61 -0.2 4,751,050 + CA264_20630 0.69 +0.8 4,751,051 - CA264_20630 0.69 +2.6 4,751,051 - CA264_20630 0.69 +0.3 4,751,054 + CA264_20630 0.69 +0.0 4,751,054 + CA264_20630 0.69 +0.4 4,751,054 + CA264_20630 0.69 +0.6 4,751,055 - CA264_20630 0.69 -0.2 4,751,055 - CA264_20630 0.69 +0.6 4,751,057 - CA264_20630 0.70 -0.1 4,751,091 - CA264_20630 0.74 -0.6 4,751,105 - CA264_20630 0.75 -0.1 4,751,106 + CA264_20630 0.75 +0.4 4,751,132 + CA264_20630 0.78 -1.1 4,751,132 + CA264_20630 0.78 -1.2 4,751,132 + CA264_20630 0.78 -0.9 4,751,133 - CA264_20630 0.79 +0.2 4,751,133 - CA264_20630 0.79 -0.1 4,751,133 - CA264_20630 0.79 +0.2 4,751,200 - CA264_20630 0.86 -0.7 4,751,287 + -1.0 4,751,313 - +0.1 4,751,313 - +0.1 4,751,313 - -2.0 4,751,386 + +1.7 4,751,386 + -1.2 4,751,386 + -1.0 4,751,386 + -0.8 4,751,389 + -0.4 4,751,479 + CA264_20635 0.16 -1.8 4,751,640 - CA264_20635 0.44 +1.1 4,751,642 - CA264_20635 0.44 +0.3 4,751,985 - -1.1 4,752,636 - -0.4 4,752,664 + +0.3 4,752,684 + -0.3 4,752,685 - -1.0 4,752,700 - +0.6 4,752,721 - -0.6 4,752,727 + +0.4 4,752,748 + -0.2 4,752,755 - +3.0
Or see this region's nucleotide sequence