Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19185 and CA264_19190 are separated by 130 nucleotides CA264_19190 and CA264_19195 are separated by 29 nucleotides
CA264_19185: CA264_19185 - adenosylhomocysteinase, at 4,455,956 to 4,457,263
_19185
CA264_19190: CA264_19190 - DNA-binding response regulator, at 4,457,394 to 4,458,140
_19190
CA264_19195: CA264_19195 - hypothetical protein, at 4,458,170 to 4,461,142
_19195
Position (kb)
4457
4458
4459 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4457.262 kb on - strand at 4457.284 kb on + strand at 4457.369 kb on + strand at 4457.381 kb on + strand at 4457.381 kb on + strand at 4457.381 kb on + strand at 4457.382 kb on - strand at 4457.397 kb on + strand at 4457.397 kb on + strand at 4457.399 kb on + strand at 4457.399 kb on + strand at 4457.399 kb on + strand at 4457.400 kb on - strand at 4457.400 kb on - strand at 4457.411 kb on + strand at 4457.411 kb on + strand at 4457.412 kb on - strand at 4457.431 kb on + strand at 4457.432 kb on - strand at 4457.432 kb on - strand at 4457.493 kb on + strand, within CA264_19190 at 4457.494 kb on - strand, within CA264_19190 at 4457.494 kb on - strand, within CA264_19190 at 4457.494 kb on - strand, within CA264_19190 at 4457.555 kb on + strand, within CA264_19190 at 4457.555 kb on + strand, within CA264_19190 at 4457.555 kb on + strand, within CA264_19190 at 4457.555 kb on + strand, within CA264_19190 at 4457.555 kb on + strand, within CA264_19190 at 4457.556 kb on - strand, within CA264_19190 at 4457.556 kb on - strand, within CA264_19190 at 4457.583 kb on + strand, within CA264_19190 at 4457.584 kb on - strand, within CA264_19190 at 4457.590 kb on + strand, within CA264_19190 at 4457.591 kb on - strand, within CA264_19190 at 4457.612 kb on + strand, within CA264_19190 at 4457.620 kb on + strand, within CA264_19190 at 4457.620 kb on + strand, within CA264_19190 at 4457.682 kb on + strand, within CA264_19190 at 4457.698 kb on + strand, within CA264_19190 at 4457.709 kb on + strand, within CA264_19190 at 4457.769 kb on - strand, within CA264_19190 at 4457.902 kb on + strand, within CA264_19190 at 4457.903 kb on - strand, within CA264_19190 at 4457.907 kb on - strand, within CA264_19190 at 4457.975 kb on + strand, within CA264_19190 at 4457.976 kb on - strand, within CA264_19190 at 4458.021 kb on + strand, within CA264_19190 at 4458.022 kb on - strand, within CA264_19190 at 4458.022 kb on - strand, within CA264_19190 at 4458.022 kb on - strand, within CA264_19190 at 4458.022 kb on - strand, within CA264_19190 at 4458.023 kb on + strand, within CA264_19190 at 4458.023 kb on + strand, within CA264_19190 at 4458.023 kb on + strand, within CA264_19190 at 4458.024 kb on - strand, within CA264_19190 at 4458.024 kb on - strand, within CA264_19190 at 4458.042 kb on + strand, within CA264_19190 at 4458.043 kb on - strand, within CA264_19190 at 4458.043 kb on - strand, within CA264_19190 at 4458.147 kb on - strand at 4458.261 kb on - strand at 4458.263 kb on + strand at 4458.264 kb on - strand at 4458.269 kb on - strand at 4458.351 kb on + strand at 4458.418 kb on - strand at 4458.438 kb on - strand at 4458.476 kb on + strand, within CA264_19195 at 4458.477 kb on - strand, within CA264_19195 at 4458.477 kb on - strand, within CA264_19195 at 4458.488 kb on + strand, within CA264_19195 at 4458.526 kb on + strand, within CA264_19195 at 4458.527 kb on - strand, within CA264_19195 at 4458.537 kb on + strand, within CA264_19195 at 4458.574 kb on - strand, within CA264_19195 at 4458.590 kb on - strand, within CA264_19195 at 4458.637 kb on + strand, within CA264_19195 at 4458.668 kb on + strand, within CA264_19195 at 4458.668 kb on + strand, within CA264_19195 at 4458.668 kb on + strand, within CA264_19195 at 4458.668 kb on + strand, within CA264_19195 at 4458.669 kb on - strand, within CA264_19195 at 4458.922 kb on + strand, within CA264_19195 at 4458.923 kb on - strand, within CA264_19195 at 4458.966 kb on + strand, within CA264_19195 at 4459.111 kb on - strand, within CA264_19195 at 4459.111 kb on - strand, within CA264_19195 at 4459.111 kb on - strand, within CA264_19195 at 4459.111 kb on - strand, within CA264_19195 at 4459.114 kb on + strand, within CA264_19195 at 4459.114 kb on + strand, within CA264_19195 at 4459.117 kb on - strand, within CA264_19195 at 4459.117 kb on - strand, within CA264_19195 at 4459.122 kb on - strand, within CA264_19195
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 4,457,262 - -1.1 4,457,284 + -0.1 4,457,369 + +2.6 4,457,381 + -0.5 4,457,381 + +0.1 4,457,381 + -0.9 4,457,382 - +0.0 4,457,397 + +1.1 4,457,397 + -0.4 4,457,399 + +0.2 4,457,399 + +0.6 4,457,399 + -0.1 4,457,400 - +0.3 4,457,400 - -0.5 4,457,411 + +1.0 4,457,411 + -0.3 4,457,412 - +0.0 4,457,431 + +0.5 4,457,432 - -0.9 4,457,432 - -0.5 4,457,493 + CA264_19190 0.13 +1.2 4,457,494 - CA264_19190 0.13 -0.1 4,457,494 - CA264_19190 0.13 +0.5 4,457,494 - CA264_19190 0.13 +1.3 4,457,555 + CA264_19190 0.22 -0.8 4,457,555 + CA264_19190 0.22 -1.7 4,457,555 + CA264_19190 0.22 -1.0 4,457,555 + CA264_19190 0.22 -1.6 4,457,555 + CA264_19190 0.22 -0.1 4,457,556 - CA264_19190 0.22 -0.0 4,457,556 - CA264_19190 0.22 -0.2 4,457,583 + CA264_19190 0.25 +2.3 4,457,584 - CA264_19190 0.25 -0.5 4,457,590 + CA264_19190 0.26 -0.6 4,457,591 - CA264_19190 0.26 +0.4 4,457,612 + CA264_19190 0.29 -0.4 4,457,620 + CA264_19190 0.30 -0.4 4,457,620 + CA264_19190 0.30 +2.4 4,457,682 + CA264_19190 0.39 -0.8 4,457,698 + CA264_19190 0.41 -0.0 4,457,709 + CA264_19190 0.42 -0.1 4,457,769 - CA264_19190 0.50 -0.2 4,457,902 + CA264_19190 0.68 +0.2 4,457,903 - CA264_19190 0.68 -0.7 4,457,907 - CA264_19190 0.69 -1.7 4,457,975 + CA264_19190 0.78 -1.3 4,457,976 - CA264_19190 0.78 -0.4 4,458,021 + CA264_19190 0.84 +2.4 4,458,022 - CA264_19190 0.84 -0.7 4,458,022 - CA264_19190 0.84 +0.6 4,458,022 - CA264_19190 0.84 +1.3 4,458,022 - CA264_19190 0.84 +1.3 4,458,023 + CA264_19190 0.84 +0.3 4,458,023 + CA264_19190 0.84 +1.4 4,458,023 + CA264_19190 0.84 -0.1 4,458,024 - CA264_19190 0.84 +0.2 4,458,024 - CA264_19190 0.84 -0.8 4,458,042 + CA264_19190 0.87 +0.6 4,458,043 - CA264_19190 0.87 +1.4 4,458,043 - CA264_19190 0.87 -0.9 4,458,147 - -0.2 4,458,261 - +1.7 4,458,263 + +0.6 4,458,264 - +0.9 4,458,269 - +2.1 4,458,351 + +0.6 4,458,418 - +0.9 4,458,438 - +0.8 4,458,476 + CA264_19195 0.10 -0.4 4,458,477 - CA264_19195 0.10 +1.5 4,458,477 - CA264_19195 0.10 -1.3 4,458,488 + CA264_19195 0.11 -0.4 4,458,526 + CA264_19195 0.12 +0.3 4,458,527 - CA264_19195 0.12 +1.2 4,458,537 + CA264_19195 0.12 +0.1 4,458,574 - CA264_19195 0.14 +1.6 4,458,590 - CA264_19195 0.14 +2.1 4,458,637 + CA264_19195 0.16 -0.2 4,458,668 + CA264_19195 0.17 +0.4 4,458,668 + CA264_19195 0.17 +0.2 4,458,668 + CA264_19195 0.17 +1.0 4,458,668 + CA264_19195 0.17 +0.6 4,458,669 - CA264_19195 0.17 +0.9 4,458,922 + CA264_19195 0.25 +1.9 4,458,923 - CA264_19195 0.25 +1.1 4,458,966 + CA264_19195 0.27 +1.3 4,459,111 - CA264_19195 0.32 +1.2 4,459,111 - CA264_19195 0.32 +0.8 4,459,111 - CA264_19195 0.32 -0.2 4,459,111 - CA264_19195 0.32 +0.3 4,459,114 + CA264_19195 0.32 +1.2 4,459,114 + CA264_19195 0.32 -1.1 4,459,117 - CA264_19195 0.32 +0.7 4,459,117 - CA264_19195 0.32 -0.2 4,459,122 - CA264_19195 0.32 -1.9
Or see this region's nucleotide sequence