Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17865 and CA264_17870 are separated by 96 nucleotides CA264_17870 and CA264_17875 are separated by 105 nucleotides CA264_17875 and CA264_17880 are separated by 120 nucleotides
CA264_17865: CA264_17865 - CPBP family intramembrane metalloprotease domain-containing protein, at 4,154,248 to 4,155,213
_17865
CA264_17870: CA264_17870 - phosphatidate cytidylyltransferase, at 4,155,310 to 4,156,095
_17870
CA264_17875: CA264_17875 - amino acid dehydrogenase, at 4,156,201 to 4,157,475
_17875
CA264_17880: CA264_17880 - phosphatidylserine decarboxylase, at 4,157,596 to 4,158,279
_17880
Position (kb)
4156
4157
4158 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4155.211 kb on + strand at 4155.212 kb on - strand at 4155.223 kb on - strand at 4155.233 kb on + strand at 4155.233 kb on + strand at 4155.233 kb on + strand at 4155.233 kb on + strand at 4155.236 kb on - strand at 4156.125 kb on + strand at 4156.307 kb on + strand at 4156.308 kb on - strand at 4156.404 kb on - strand, within CA264_17875 at 4156.565 kb on - strand, within CA264_17875 at 4156.627 kb on - strand, within CA264_17875 at 4156.650 kb on - strand, within CA264_17875 at 4157.094 kb on - strand, within CA264_17875 at 4157.192 kb on - strand, within CA264_17875 at 4157.275 kb on + strand, within CA264_17875 at 4157.474 kb on - strand at 4157.526 kb on + strand at 4157.538 kb on + strand at 4157.567 kb on + strand at 4158.277 kb on + strand at 4158.293 kb on - strand at 4158.293 kb on - strand at 4158.294 kb on + strand at 4158.294 kb on + strand at 4158.295 kb on - strand at 4158.300 kb on - strand at 4158.303 kb on + strand at 4158.303 kb on + strand at 4158.303 kb on + strand at 4158.304 kb on - strand at 4158.402 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 4,155,211 + -1.5 4,155,212 - -2.8 4,155,223 - -1.6 4,155,233 + -0.5 4,155,233 + +0.1 4,155,233 + -1.5 4,155,233 + -0.5 4,155,236 - -0.5 4,156,125 + -0.0 4,156,307 + -0.7 4,156,308 - -2.0 4,156,404 - CA264_17875 0.16 +0.1 4,156,565 - CA264_17875 0.29 -1.0 4,156,627 - CA264_17875 0.33 -1.6 4,156,650 - CA264_17875 0.35 +0.0 4,157,094 - CA264_17875 0.70 -1.2 4,157,192 - CA264_17875 0.78 +0.5 4,157,275 + CA264_17875 0.84 -0.0 4,157,474 - -0.6 4,157,526 + +0.1 4,157,538 + +0.4 4,157,567 + -0.6 4,158,277 + +0.9 4,158,293 - -0.3 4,158,293 - -1.7 4,158,294 + -0.4 4,158,294 + +0.1 4,158,295 - -0.1 4,158,300 - -0.8 4,158,303 + -0.2 4,158,303 + -0.1 4,158,303 + -0.2 4,158,304 - -1.2 4,158,402 - -2.0
Or see this region's nucleotide sequence