Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17595 and CA264_17600 are separated by 136 nucleotides CA264_17600 and CA264_17605 are separated by 49 nucleotides CA264_17605 and CA264_17610 are separated by 284 nucleotides
CA264_17595: CA264_17595 - 3-hydroxyacyl-CoA dehydrogenase, at 4,098,744 to 4,099,421
_17595
CA264_17600: CA264_17600 - hypothetical protein, at 4,099,558 to 4,100,178
_17600
CA264_17605: CA264_17605 - glutamine--fructose-6-phosphate aminotransferase, at 4,100,228 to 4,102,063
_17605
CA264_17610: CA264_17610 - glycogen synthase, at 4,102,348 to 4,103,160
_17610
Position (kb)
4100
4101
4102
4103 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4099.233 kb on - strand, within CA264_17595 at 4099.234 kb on + strand, within CA264_17595 at 4099.323 kb on + strand, within CA264_17595 at 4099.345 kb on - strand, within CA264_17595 at 4099.369 kb on - strand at 4099.376 kb on - strand at 4099.420 kb on - strand at 4099.426 kb on - strand at 4099.428 kb on - strand at 4099.428 kb on - strand at 4099.428 kb on - strand at 4099.495 kb on - strand at 4099.502 kb on + strand at 4099.502 kb on + strand at 4099.502 kb on + strand at 4099.546 kb on - strand at 4099.547 kb on + strand at 4099.547 kb on + strand at 4099.547 kb on + strand at 4099.547 kb on + strand at 4099.548 kb on - strand at 4099.553 kb on - strand at 4099.582 kb on - strand at 4099.584 kb on - strand at 4099.596 kb on - strand at 4099.602 kb on + strand at 4099.603 kb on - strand at 4099.638 kb on + strand, within CA264_17600 at 4099.639 kb on - strand, within CA264_17600 at 4099.639 kb on - strand, within CA264_17600 at 4099.639 kb on - strand, within CA264_17600 at 4099.682 kb on - strand, within CA264_17600 at 4099.743 kb on + strand, within CA264_17600 at 4099.747 kb on + strand, within CA264_17600 at 4099.747 kb on + strand, within CA264_17600 at 4099.774 kb on + strand, within CA264_17600 at 4099.873 kb on + strand, within CA264_17600 at 4099.874 kb on - strand, within CA264_17600 at 4099.875 kb on + strand, within CA264_17600 at 4099.876 kb on - strand, within CA264_17600 at 4099.876 kb on - strand, within CA264_17600 at 4099.948 kb on + strand, within CA264_17600 at 4100.003 kb on + strand, within CA264_17600 at 4100.040 kb on - strand, within CA264_17600 at 4100.040 kb on - strand, within CA264_17600 at 4100.091 kb on + strand, within CA264_17600 at 4100.207 kb on + strand at 4102.063 kb on + strand at 4102.063 kb on + strand at 4102.117 kb on + strand at 4102.118 kb on - strand at 4102.264 kb on - strand at 4102.303 kb on + strand at 4102.306 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 4,099,233 - CA264_17595 0.72 +0.5 4,099,234 + CA264_17595 0.72 -1.2 4,099,323 + CA264_17595 0.85 -0.3 4,099,345 - CA264_17595 0.89 +0.1 4,099,369 - -0.2 4,099,376 - -1.1 4,099,420 - +0.4 4,099,426 - -0.6 4,099,428 - -0.8 4,099,428 - -0.4 4,099,428 - -0.4 4,099,495 - -1.0 4,099,502 + -1.3 4,099,502 + -0.6 4,099,502 + +0.3 4,099,546 - -0.1 4,099,547 + -0.5 4,099,547 + +0.5 4,099,547 + -0.7 4,099,547 + +0.5 4,099,548 - -1.2 4,099,553 - -0.5 4,099,582 - -0.3 4,099,584 - +1.3 4,099,596 - +1.2 4,099,602 + +0.3 4,099,603 - +0.1 4,099,638 + CA264_17600 0.13 -0.6 4,099,639 - CA264_17600 0.13 -0.6 4,099,639 - CA264_17600 0.13 +0.1 4,099,639 - CA264_17600 0.13 -0.6 4,099,682 - CA264_17600 0.20 +0.2 4,099,743 + CA264_17600 0.30 +0.2 4,099,747 + CA264_17600 0.30 -0.6 4,099,747 + CA264_17600 0.30 +3.6 4,099,774 + CA264_17600 0.35 +0.4 4,099,873 + CA264_17600 0.51 -1.6 4,099,874 - CA264_17600 0.51 -0.1 4,099,875 + CA264_17600 0.51 -1.0 4,099,876 - CA264_17600 0.51 -0.1 4,099,876 - CA264_17600 0.51 -0.6 4,099,948 + CA264_17600 0.63 -0.0 4,100,003 + CA264_17600 0.72 +0.2 4,100,040 - CA264_17600 0.78 -0.1 4,100,040 - CA264_17600 0.78 -0.3 4,100,091 + CA264_17600 0.86 -0.2 4,100,207 + -3.0 4,102,063 + -0.8 4,102,063 + +0.1 4,102,117 + +0.6 4,102,118 - -0.3 4,102,264 - +0.2 4,102,303 + +2.6 4,102,306 - +1.0
Or see this region's nucleotide sequence