Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14005 and CA264_14010 are separated by 128 nucleotides CA264_14010 and CA264_14015 are separated by 20 nucleotides
CA264_14005: CA264_14005 - D-xylose transporter XylE, at 3,278,887 to 3,280,299
_14005
CA264_14010: CA264_14010 - carbohydrate kinase, at 3,280,428 to 3,281,459
_14010
CA264_14015: CA264_14015 - bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase, at 3,281,480 to 3,282,151
_14015
Position (kb)
3280
3281
3282 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3279.681 kb on - strand, within CA264_14005 at 3279.697 kb on + strand, within CA264_14005 at 3279.697 kb on + strand, within CA264_14005 at 3279.698 kb on - strand, within CA264_14005 at 3279.698 kb on - strand, within CA264_14005 at 3279.803 kb on + strand, within CA264_14005 at 3279.803 kb on + strand, within CA264_14005 at 3279.803 kb on + strand, within CA264_14005 at 3279.803 kb on + strand, within CA264_14005 at 3279.804 kb on - strand, within CA264_14005 at 3279.804 kb on - strand, within CA264_14005 at 3279.808 kb on - strand, within CA264_14005 at 3279.808 kb on - strand, within CA264_14005 at 3279.844 kb on + strand, within CA264_14005 at 3279.874 kb on - strand, within CA264_14005 at 3279.940 kb on + strand, within CA264_14005 at 3280.167 kb on - strand at 3280.295 kb on + strand at 3280.295 kb on + strand at 3280.296 kb on - strand at 3280.296 kb on - strand at 3280.296 kb on - strand at 3280.297 kb on + strand at 3280.297 kb on + strand at 3280.424 kb on - strand at 3280.426 kb on - strand at 3280.445 kb on - strand at 3280.590 kb on + strand, within CA264_14010 at 3280.595 kb on + strand, within CA264_14010 at 3280.595 kb on + strand, within CA264_14010 at 3280.702 kb on - strand, within CA264_14010 at 3280.702 kb on - strand, within CA264_14010 at 3280.746 kb on + strand, within CA264_14010 at 3280.747 kb on - strand, within CA264_14010 at 3280.752 kb on - strand, within CA264_14010 at 3280.818 kb on + strand, within CA264_14010 at 3280.818 kb on + strand, within CA264_14010 at 3280.960 kb on - strand, within CA264_14010 at 3280.960 kb on - strand, within CA264_14010 at 3281.132 kb on - strand, within CA264_14010 at 3281.180 kb on + strand, within CA264_14010 at 3281.217 kb on + strand, within CA264_14010 at 3281.218 kb on - strand, within CA264_14010 at 3281.300 kb on + strand, within CA264_14010 at 3281.317 kb on - strand, within CA264_14010 at 3281.325 kb on + strand, within CA264_14010 at 3281.466 kb on - strand at 3281.468 kb on - strand at 3281.479 kb on + strand at 3281.480 kb on - strand at 3281.514 kb on + strand at 3281.544 kb on - strand at 3281.545 kb on + strand at 3281.546 kb on - strand at 3281.588 kb on + strand, within CA264_14015 at 3281.588 kb on + strand, within CA264_14015 at 3281.589 kb on - strand, within CA264_14015 at 3281.618 kb on - strand, within CA264_14015 at 3281.650 kb on + strand, within CA264_14015 at 3281.713 kb on - strand, within CA264_14015 at 3281.738 kb on + strand, within CA264_14015 at 3281.738 kb on + strand, within CA264_14015 at 3281.739 kb on - strand, within CA264_14015 at 3281.962 kb on + strand, within CA264_14015 at 3281.998 kb on + strand, within CA264_14015 at 3282.068 kb on - strand, within CA264_14015 at 3282.149 kb on + strand at 3282.181 kb on + strand at 3282.289 kb on - strand at 3282.318 kb on - strand at 3282.337 kb on - strand at 3282.345 kb on + strand at 3282.346 kb on - strand at 3282.346 kb on - strand at 3282.427 kb on - strand at 3282.428 kb on + strand at 3282.429 kb on - strand at 3282.452 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 3,279,681 - CA264_14005 0.56 -0.3 3,279,697 + CA264_14005 0.57 -2.8 3,279,697 + CA264_14005 0.57 -0.0 3,279,698 - CA264_14005 0.57 -0.0 3,279,698 - CA264_14005 0.57 -0.7 3,279,803 + CA264_14005 0.65 -0.1 3,279,803 + CA264_14005 0.65 -0.3 3,279,803 + CA264_14005 0.65 -0.4 3,279,803 + CA264_14005 0.65 -0.2 3,279,804 - CA264_14005 0.65 +0.5 3,279,804 - CA264_14005 0.65 +0.5 3,279,808 - CA264_14005 0.65 -0.3 3,279,808 - CA264_14005 0.65 +0.2 3,279,844 + CA264_14005 0.68 +0.9 3,279,874 - CA264_14005 0.70 -0.7 3,279,940 + CA264_14005 0.75 -1.3 3,280,167 - -0.5 3,280,295 + -0.4 3,280,295 + -0.3 3,280,296 - -0.7 3,280,296 - -0.2 3,280,296 - +0.2 3,280,297 + +0.8 3,280,297 + +0.1 3,280,424 - -0.1 3,280,426 - -0.1 3,280,445 - +0.5 3,280,590 + CA264_14010 0.16 -1.2 3,280,595 + CA264_14010 0.16 +0.9 3,280,595 + CA264_14010 0.16 -1.6 3,280,702 - CA264_14010 0.27 -0.1 3,280,702 - CA264_14010 0.27 -0.3 3,280,746 + CA264_14010 0.31 +0.2 3,280,747 - CA264_14010 0.31 -0.4 3,280,752 - CA264_14010 0.31 -0.6 3,280,818 + CA264_14010 0.38 -0.8 3,280,818 + CA264_14010 0.38 +0.2 3,280,960 - CA264_14010 0.52 -2.3 3,280,960 - CA264_14010 0.52 -0.1 3,281,132 - CA264_14010 0.68 -0.3 3,281,180 + CA264_14010 0.73 -0.5 3,281,217 + CA264_14010 0.76 -0.7 3,281,218 - CA264_14010 0.77 -0.7 3,281,300 + CA264_14010 0.84 +1.2 3,281,317 - CA264_14010 0.86 -0.3 3,281,325 + CA264_14010 0.87 -0.8 3,281,466 - +0.2 3,281,468 - -1.1 3,281,479 + -0.2 3,281,480 - +0.0 3,281,514 + +1.1 3,281,544 - -0.9 3,281,545 + -0.5 3,281,546 - -1.0 3,281,588 + CA264_14015 0.16 +0.5 3,281,588 + CA264_14015 0.16 +0.2 3,281,589 - CA264_14015 0.16 -0.3 3,281,618 - CA264_14015 0.21 -1.4 3,281,650 + CA264_14015 0.25 +0.5 3,281,713 - CA264_14015 0.35 -0.3 3,281,738 + CA264_14015 0.38 +0.2 3,281,738 + CA264_14015 0.38 +0.1 3,281,739 - CA264_14015 0.39 -0.7 3,281,962 + CA264_14015 0.72 -0.7 3,281,998 + CA264_14015 0.77 -1.5 3,282,068 - CA264_14015 0.88 -0.2 3,282,149 + +0.2 3,282,181 + -0.4 3,282,289 - -0.2 3,282,318 - +0.4 3,282,337 - +0.4 3,282,345 + -0.9 3,282,346 - -1.1 3,282,346 - +0.4 3,282,427 - -1.4 3,282,428 + -0.3 3,282,429 - -0.6 3,282,452 - -0.1
Or see this region's nucleotide sequence