Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13390 and CA264_13395 are separated by 275 nucleotides CA264_13395 and CA264_13400 are separated by 111 nucleotides
CA264_13390: CA264_13390 - sodium-translocating pyrophosphatase, at 3,121,509 to 3,123,773
_13390
CA264_13395: CA264_13395 - aminopeptidase, at 3,124,049 to 3,124,963
_13395
CA264_13400: CA264_13400 - tol-pal system protein YbgF, at 3,125,075 to 3,126,322
_13400
Position (kb)
3124
3125 Strain fitness (log2 ratio)
-2
-1
0
1 at 3123.129 kb on - strand, within CA264_13390 at 3123.138 kb on + strand, within CA264_13390 at 3123.139 kb on - strand, within CA264_13390 at 3123.213 kb on + strand, within CA264_13390 at 3123.213 kb on + strand, within CA264_13390 at 3123.216 kb on - strand, within CA264_13390 at 3123.324 kb on - strand, within CA264_13390 at 3123.376 kb on - strand, within CA264_13390 at 3123.401 kb on + strand, within CA264_13390 at 3123.477 kb on - strand, within CA264_13390 at 3123.527 kb on + strand, within CA264_13390 at 3123.553 kb on + strand at 3123.554 kb on - strand at 3123.722 kb on - strand at 3123.800 kb on - strand at 3123.800 kb on - strand at 3123.806 kb on - strand at 3123.806 kb on - strand at 3123.808 kb on - strand at 3123.814 kb on - strand at 3123.947 kb on + strand at 3123.999 kb on + strand at 3124.000 kb on - strand at 3124.075 kb on - strand at 3124.088 kb on - strand at 3124.088 kb on - strand at 3124.152 kb on - strand, within CA264_13395 at 3124.234 kb on - strand, within CA264_13395 at 3124.274 kb on + strand, within CA264_13395 at 3124.274 kb on + strand, within CA264_13395 at 3124.278 kb on + strand, within CA264_13395 at 3124.278 kb on + strand, within CA264_13395 at 3124.358 kb on - strand, within CA264_13395 at 3124.358 kb on - strand, within CA264_13395 at 3124.404 kb on + strand, within CA264_13395 at 3124.404 kb on + strand, within CA264_13395 at 3124.405 kb on - strand, within CA264_13395 at 3124.463 kb on - strand, within CA264_13395 at 3124.614 kb on + strand, within CA264_13395 at 3124.614 kb on + strand, within CA264_13395 at 3124.614 kb on + strand, within CA264_13395 at 3124.614 kb on + strand, within CA264_13395 at 3124.614 kb on + strand, within CA264_13395 at 3124.615 kb on - strand, within CA264_13395 at 3124.615 kb on - strand, within CA264_13395 at 3124.651 kb on + strand, within CA264_13395 at 3124.651 kb on + strand, within CA264_13395 at 3124.693 kb on - strand, within CA264_13395 at 3124.884 kb on + strand at 3124.889 kb on + strand at 3125.018 kb on + strand at 3125.028 kb on - strand at 3125.030 kb on + strand at 3125.049 kb on + strand at 3125.056 kb on + strand at 3125.056 kb on + strand at 3125.056 kb on + strand at 3125.057 kb on - strand at 3125.057 kb on - strand at 3125.072 kb on + strand at 3125.072 kb on + strand at 3125.127 kb on + strand at 3125.127 kb on + strand at 3125.128 kb on - strand at 3125.175 kb on + strand at 3125.176 kb on - strand at 3125.196 kb on + strand at 3125.217 kb on + strand, within CA264_13400 at 3125.217 kb on + strand, within CA264_13400 at 3125.283 kb on - strand, within CA264_13400 at 3125.283 kb on - strand, within CA264_13400 at 3125.283 kb on - strand, within CA264_13400 at 3125.283 kb on - strand, within CA264_13400 at 3125.295 kb on - strand, within CA264_13400 at 3125.392 kb on - strand, within CA264_13400 at 3125.442 kb on - strand, within CA264_13400 at 3125.456 kb on - strand, within CA264_13400 at 3125.477 kb on + strand, within CA264_13400 at 3125.478 kb on - strand, within CA264_13400 at 3125.529 kb on - strand, within CA264_13400 at 3125.679 kb on - strand, within CA264_13400 at 3125.708 kb on - strand, within CA264_13400 at 3125.708 kb on - strand, within CA264_13400 at 3125.812 kb on + strand, within CA264_13400 at 3125.893 kb on + strand, within CA264_13400 at 3125.893 kb on + strand, within CA264_13400 at 3125.897 kb on + strand, within CA264_13400 at 3125.897 kb on + strand, within CA264_13400 at 3125.912 kb on + strand, within CA264_13400 at 3125.927 kb on + strand, within CA264_13400 at 3125.928 kb on - strand, within CA264_13400 at 3125.946 kb on + strand, within CA264_13400
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 3,123,129 - CA264_13390 0.72 -0.5 3,123,138 + CA264_13390 0.72 -0.0 3,123,139 - CA264_13390 0.72 -0.6 3,123,213 + CA264_13390 0.75 +0.9 3,123,213 + CA264_13390 0.75 +0.9 3,123,216 - CA264_13390 0.75 -0.6 3,123,324 - CA264_13390 0.80 -0.5 3,123,376 - CA264_13390 0.82 -0.1 3,123,401 + CA264_13390 0.84 +0.8 3,123,477 - CA264_13390 0.87 -0.3 3,123,527 + CA264_13390 0.89 +0.3 3,123,553 + +0.3 3,123,554 - +0.1 3,123,722 - +0.5 3,123,800 - -0.7 3,123,800 - +0.3 3,123,806 - -0.4 3,123,806 - -0.5 3,123,808 - +0.7 3,123,814 - -0.1 3,123,947 + +0.5 3,123,999 + +1.7 3,124,000 - -0.7 3,124,075 - +0.4 3,124,088 - -0.5 3,124,088 - -0.1 3,124,152 - CA264_13395 0.11 +0.0 3,124,234 - CA264_13395 0.20 +0.7 3,124,274 + CA264_13395 0.25 -0.1 3,124,274 + CA264_13395 0.25 -0.1 3,124,278 + CA264_13395 0.25 -0.3 3,124,278 + CA264_13395 0.25 -0.2 3,124,358 - CA264_13395 0.34 +0.7 3,124,358 - CA264_13395 0.34 +0.9 3,124,404 + CA264_13395 0.39 -0.2 3,124,404 + CA264_13395 0.39 -0.3 3,124,405 - CA264_13395 0.39 +0.4 3,124,463 - CA264_13395 0.45 -0.0 3,124,614 + CA264_13395 0.62 -0.5 3,124,614 + CA264_13395 0.62 -0.3 3,124,614 + CA264_13395 0.62 +0.4 3,124,614 + CA264_13395 0.62 -0.3 3,124,614 + CA264_13395 0.62 -0.3 3,124,615 - CA264_13395 0.62 -0.5 3,124,615 - CA264_13395 0.62 -0.0 3,124,651 + CA264_13395 0.66 +1.1 3,124,651 + CA264_13395 0.66 -0.2 3,124,693 - CA264_13395 0.70 +1.2 3,124,884 + -0.7 3,124,889 + -0.0 3,125,018 + -0.1 3,125,028 - -2.1 3,125,030 + -0.4 3,125,049 + +0.1 3,125,056 + +0.0 3,125,056 + +0.4 3,125,056 + +0.1 3,125,057 - -1.4 3,125,057 - -0.4 3,125,072 + -2.5 3,125,072 + +0.5 3,125,127 + -1.2 3,125,127 + -0.7 3,125,128 - -1.1 3,125,175 + -0.1 3,125,176 - -0.2 3,125,196 + +0.5 3,125,217 + CA264_13400 0.11 -1.3 3,125,217 + CA264_13400 0.11 -1.1 3,125,283 - CA264_13400 0.17 -1.1 3,125,283 - CA264_13400 0.17 -0.6 3,125,283 - CA264_13400 0.17 -1.2 3,125,283 - CA264_13400 0.17 +0.1 3,125,295 - CA264_13400 0.18 -1.0 3,125,392 - CA264_13400 0.25 -0.4 3,125,442 - CA264_13400 0.29 -0.2 3,125,456 - CA264_13400 0.31 -1.4 3,125,477 + CA264_13400 0.32 -2.0 3,125,478 - CA264_13400 0.32 -0.3 3,125,529 - CA264_13400 0.36 -0.5 3,125,679 - CA264_13400 0.48 +1.2 3,125,708 - CA264_13400 0.51 -0.7 3,125,708 - CA264_13400 0.51 -0.8 3,125,812 + CA264_13400 0.59 +0.6 3,125,893 + CA264_13400 0.66 -0.3 3,125,893 + CA264_13400 0.66 -1.2 3,125,897 + CA264_13400 0.66 -0.9 3,125,897 + CA264_13400 0.66 -1.0 3,125,912 + CA264_13400 0.67 -0.9 3,125,927 + CA264_13400 0.68 -0.8 3,125,928 - CA264_13400 0.68 -0.9 3,125,946 + CA264_13400 0.70 -0.7
Or see this region's nucleotide sequence