Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12200 and CA264_12205 are separated by 66 nucleotides CA264_12205 and CA264_12210 are separated by 158 nucleotides
CA264_12200: CA264_12200 - hypothetical protein, at 2,842,472 to 2,844,229
_12200
CA264_12205: CA264_12205 - DNA starvation/stationary phase protection protein, at 2,844,296 to 2,844,772
_12205
CA264_12210: CA264_12210 - hypothetical protein, at 2,844,931 to 2,846,238
_12210
Position (kb)
2844
2845 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2843.385 kb on - strand, within CA264_12200 at 2843.437 kb on - strand, within CA264_12200 at 2843.571 kb on + strand, within CA264_12200 at 2843.571 kb on + strand, within CA264_12200 at 2843.591 kb on + strand, within CA264_12200 at 2843.592 kb on - strand, within CA264_12200 at 2843.594 kb on + strand, within CA264_12200 at 2843.595 kb on - strand, within CA264_12200 at 2843.595 kb on - strand, within CA264_12200 at 2843.633 kb on + strand, within CA264_12200 at 2843.634 kb on - strand, within CA264_12200 at 2843.678 kb on + strand, within CA264_12200 at 2843.740 kb on - strand, within CA264_12200 at 2843.740 kb on - strand, within CA264_12200 at 2843.783 kb on + strand, within CA264_12200 at 2843.784 kb on - strand, within CA264_12200 at 2843.795 kb on + strand, within CA264_12200 at 2843.797 kb on + strand, within CA264_12200 at 2843.798 kb on - strand, within CA264_12200 at 2843.828 kb on + strand, within CA264_12200 at 2843.900 kb on + strand, within CA264_12200 at 2843.901 kb on - strand, within CA264_12200 at 2843.963 kb on + strand, within CA264_12200 at 2843.963 kb on + strand, within CA264_12200 at 2843.964 kb on - strand, within CA264_12200 at 2844.008 kb on + strand, within CA264_12200 at 2844.009 kb on - strand, within CA264_12200 at 2844.020 kb on + strand, within CA264_12200 at 2844.164 kb on + strand at 2844.164 kb on + strand at 2844.170 kb on + strand at 2844.185 kb on + strand at 2844.213 kb on + strand at 2844.213 kb on + strand at 2844.213 kb on + strand at 2844.213 kb on + strand at 2844.239 kb on + strand at 2844.286 kb on - strand at 2844.318 kb on + strand at 2844.516 kb on + strand, within CA264_12205 at 2844.520 kb on + strand, within CA264_12205 at 2844.637 kb on + strand, within CA264_12205 at 2844.637 kb on + strand, within CA264_12205 at 2844.690 kb on + strand, within CA264_12205 at 2844.690 kb on + strand, within CA264_12205 at 2844.690 kb on + strand, within CA264_12205 at 2844.691 kb on - strand, within CA264_12205 at 2844.747 kb on - strand at 2844.790 kb on + strand at 2844.790 kb on + strand at 2844.819 kb on - strand at 2844.871 kb on + strand at 2844.872 kb on - strand at 2844.872 kb on - strand at 2844.872 kb on - strand at 2844.875 kb on + strand at 2844.875 kb on + strand at 2844.921 kb on + strand at 2844.933 kb on - strand at 2844.941 kb on - strand at 2844.946 kb on - strand at 2844.946 kb on - strand at 2845.035 kb on - strand at 2845.035 kb on - strand at 2845.035 kb on - strand at 2845.065 kb on - strand, within CA264_12210 at 2845.065 kb on - strand, within CA264_12210 at 2845.065 kb on - strand, within CA264_12210 at 2845.069 kb on - strand, within CA264_12210 at 2845.076 kb on + strand, within CA264_12210 at 2845.077 kb on - strand, within CA264_12210 at 2845.138 kb on - strand, within CA264_12210 at 2845.250 kb on + strand, within CA264_12210 at 2845.297 kb on + strand, within CA264_12210 at 2845.298 kb on - strand, within CA264_12210 at 2845.346 kb on - strand, within CA264_12210 at 2845.352 kb on + strand at 2845.352 kb on + strand, within CA264_12210 at 2845.478 kb on + strand, within CA264_12210 at 2845.501 kb on + strand, within CA264_12210 at 2845.572 kb on - strand, within CA264_12210 at 2845.572 kb on - strand, within CA264_12210
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 2,843,385 - CA264_12200 0.52 -0.5 2,843,437 - CA264_12200 0.55 -0.8 2,843,571 + CA264_12200 0.63 -0.5 2,843,571 + CA264_12200 0.63 -0.0 2,843,591 + CA264_12200 0.64 -1.4 2,843,592 - CA264_12200 0.64 +0.5 2,843,594 + CA264_12200 0.64 +0.4 2,843,595 - CA264_12200 0.64 +0.0 2,843,595 - CA264_12200 0.64 -0.0 2,843,633 + CA264_12200 0.66 -0.6 2,843,634 - CA264_12200 0.66 -0.7 2,843,678 + CA264_12200 0.69 -1.5 2,843,740 - CA264_12200 0.72 +1.2 2,843,740 - CA264_12200 0.72 -0.3 2,843,783 + CA264_12200 0.75 +0.5 2,843,784 - CA264_12200 0.75 +0.1 2,843,795 + CA264_12200 0.75 +0.2 2,843,797 + CA264_12200 0.75 -0.4 2,843,798 - CA264_12200 0.75 +0.0 2,843,828 + CA264_12200 0.77 -0.2 2,843,900 + CA264_12200 0.81 +1.2 2,843,901 - CA264_12200 0.81 +0.3 2,843,963 + CA264_12200 0.85 +0.2 2,843,963 + CA264_12200 0.85 +0.4 2,843,964 - CA264_12200 0.85 -1.4 2,844,008 + CA264_12200 0.87 +0.2 2,844,009 - CA264_12200 0.87 +0.2 2,844,020 + CA264_12200 0.88 -0.2 2,844,164 + +1.8 2,844,164 + +0.5 2,844,170 + +0.3 2,844,185 + -0.1 2,844,213 + -0.1 2,844,213 + -0.0 2,844,213 + +0.7 2,844,213 + +0.1 2,844,239 + -0.1 2,844,286 - -0.0 2,844,318 + +0.8 2,844,516 + CA264_12205 0.46 -1.8 2,844,520 + CA264_12205 0.47 -0.2 2,844,637 + CA264_12205 0.71 -2.0 2,844,637 + CA264_12205 0.71 -1.5 2,844,690 + CA264_12205 0.83 -2.4 2,844,690 + CA264_12205 0.83 +0.2 2,844,690 + CA264_12205 0.83 -2.0 2,844,691 - CA264_12205 0.83 -3.2 2,844,747 - -2.2 2,844,790 + -2.2 2,844,790 + +1.4 2,844,819 - +1.7 2,844,871 + +1.1 2,844,872 - +1.2 2,844,872 - +1.8 2,844,872 - +1.6 2,844,875 + +0.9 2,844,875 + +1.9 2,844,921 + +1.8 2,844,933 - +1.7 2,844,941 - +1.1 2,844,946 - +1.5 2,844,946 - +0.9 2,845,035 - +1.4 2,845,035 - +1.1 2,845,035 - +2.2 2,845,065 - CA264_12210 0.10 +1.3 2,845,065 - CA264_12210 0.10 +0.9 2,845,065 - CA264_12210 0.10 +1.6 2,845,069 - CA264_12210 0.11 +2.1 2,845,076 + CA264_12210 0.11 +0.1 2,845,077 - CA264_12210 0.11 +1.4 2,845,138 - CA264_12210 0.16 +2.0 2,845,250 + CA264_12210 0.24 +0.4 2,845,297 + CA264_12210 0.28 +0.2 2,845,298 - CA264_12210 0.28 +0.1 2,845,346 - CA264_12210 0.32 +0.8 2,845,352 + +1.4 2,845,352 + CA264_12210 0.32 +0.2 2,845,478 + CA264_12210 0.42 -0.2 2,845,501 + CA264_12210 0.44 -0.4 2,845,572 - CA264_12210 0.49 +0.5 2,845,572 - CA264_12210 0.49 +1.9
Or see this region's nucleotide sequence