Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11825 and CA264_11830 are separated by 204 nucleotides CA264_11830 and CA264_11835 are separated by 127 nucleotides CA264_11835 and CA264_11840 are separated by 26 nucleotides
CA264_11825: CA264_11825 - hypothetical protein, at 2,750,842 to 2,751,939
_11825
CA264_11830: CA264_11830 - acetyl-CoA acetyltransferase, at 2,752,144 to 2,753,328
_11830
CA264_11835: CA264_11835 - hypothetical protein, at 2,753,456 to 2,753,989
_11835
CA264_11840: CA264_11840 - membrane-binding protein, at 2,754,016 to 2,755,341
_11840
Position (kb)
2752
2753
2754 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2751.206 kb on + strand, within CA264_11825 at 2751.206 kb on + strand, within CA264_11825 at 2751.207 kb on - strand, within CA264_11825 at 2751.210 kb on - strand, within CA264_11825 at 2751.212 kb on - strand, within CA264_11825 at 2751.212 kb on - strand, within CA264_11825 at 2751.212 kb on - strand, within CA264_11825 at 2751.301 kb on - strand, within CA264_11825 at 2751.426 kb on + strand, within CA264_11825 at 2751.585 kb on - strand, within CA264_11825 at 2751.585 kb on - strand, within CA264_11825 at 2751.710 kb on - strand, within CA264_11825 at 2751.829 kb on - strand, within CA264_11825 at 2751.898 kb on + strand at 2751.899 kb on - strand at 2751.903 kb on + strand at 2751.903 kb on + strand at 2751.925 kb on - strand at 2751.925 kb on - strand at 2751.939 kb on + strand at 2751.954 kb on + strand at 2751.954 kb on + strand at 2751.955 kb on - strand at 2751.971 kb on - strand at 2751.976 kb on + strand at 2751.978 kb on + strand at 2751.978 kb on + strand at 2751.978 kb on + strand at 2751.978 kb on + strand at 2751.979 kb on - strand at 2751.979 kb on - strand at 2752.128 kb on - strand at 2752.128 kb on - strand at 2752.160 kb on + strand at 2752.160 kb on + strand at 2752.160 kb on + strand at 2752.160 kb on + strand at 2752.160 kb on + strand at 2752.161 kb on - strand at 2752.161 kb on - strand at 2752.162 kb on + strand at 2752.163 kb on - strand at 2752.165 kb on - strand at 2752.331 kb on + strand, within CA264_11830 at 2752.331 kb on + strand, within CA264_11830 at 2752.332 kb on - strand, within CA264_11830 at 2752.386 kb on - strand, within CA264_11830 at 2752.386 kb on - strand, within CA264_11830 at 2752.386 kb on - strand, within CA264_11830 at 2752.393 kb on - strand, within CA264_11830 at 2752.410 kb on - strand, within CA264_11830 at 2752.516 kb on + strand, within CA264_11830 at 2752.520 kb on - strand, within CA264_11830 at 2752.603 kb on + strand, within CA264_11830 at 2752.833 kb on - strand, within CA264_11830 at 2752.919 kb on + strand, within CA264_11830 at 2753.063 kb on + strand, within CA264_11830 at 2753.139 kb on - strand, within CA264_11830 at 2753.226 kb on + strand at 2753.241 kb on - strand at 2753.241 kb on - strand at 2753.326 kb on + strand at 2753.327 kb on - strand at 2753.408 kb on - strand at 2753.411 kb on - strand at 2753.411 kb on - strand at 2753.423 kb on - strand at 2753.437 kb on + strand at 2753.438 kb on - strand at 2753.440 kb on + strand at 2753.455 kb on + strand at 2753.456 kb on - strand at 2753.456 kb on - strand at 2753.460 kb on + strand at 2753.461 kb on - strand at 2753.476 kb on - strand at 2753.517 kb on - strand, within CA264_11835 at 2753.556 kb on - strand, within CA264_11835 at 2753.556 kb on - strand, within CA264_11835 at 2753.556 kb on - strand, within CA264_11835 at 2753.557 kb on + strand, within CA264_11835 at 2753.557 kb on + strand, within CA264_11835 at 2753.557 kb on + strand, within CA264_11835 at 2753.558 kb on - strand, within CA264_11835 at 2753.558 kb on - strand, within CA264_11835 at 2753.620 kb on + strand, within CA264_11835 at 2753.648 kb on + strand, within CA264_11835 at 2753.665 kb on + strand, within CA264_11835 at 2753.665 kb on + strand, within CA264_11835 at 2753.665 kb on + strand, within CA264_11835 at 2753.665 kb on + strand, within CA264_11835 at 2753.852 kb on + strand, within CA264_11835 at 2753.853 kb on - strand, within CA264_11835 at 2753.853 kb on - strand, within CA264_11835 at 2753.985 kb on + strand at 2753.988 kb on - strand at 2753.988 kb on - strand at 2753.995 kb on + strand at 2754.008 kb on + strand at 2754.009 kb on - strand at 2754.015 kb on + strand at 2754.016 kb on - strand at 2754.016 kb on - strand at 2754.050 kb on + strand at 2754.137 kb on - strand at 2754.137 kb on - strand at 2754.161 kb on + strand, within CA264_11840 at 2754.161 kb on + strand, within CA264_11840 at 2754.162 kb on - strand, within CA264_11840 at 2754.164 kb on + strand, within CA264_11840 at 2754.164 kb on + strand, within CA264_11840 at 2754.165 kb on - strand, within CA264_11840 at 2754.244 kb on + strand, within CA264_11840 at 2754.285 kb on + strand, within CA264_11840 at 2754.285 kb on + strand, within CA264_11840 at 2754.286 kb on - strand, within CA264_11840 at 2754.286 kb on - strand, within CA264_11840
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 2,751,206 + CA264_11825 0.33 +0.3 2,751,206 + CA264_11825 0.33 -0.1 2,751,207 - CA264_11825 0.33 +0.2 2,751,210 - CA264_11825 0.34 -0.8 2,751,212 - CA264_11825 0.34 +0.1 2,751,212 - CA264_11825 0.34 -0.4 2,751,212 - CA264_11825 0.34 +0.7 2,751,301 - CA264_11825 0.42 +0.1 2,751,426 + CA264_11825 0.53 -0.5 2,751,585 - CA264_11825 0.68 +0.9 2,751,585 - CA264_11825 0.68 -0.2 2,751,710 - CA264_11825 0.79 +0.1 2,751,829 - CA264_11825 0.90 -0.4 2,751,898 + -2.2 2,751,899 - +0.8 2,751,903 + -2.2 2,751,903 + +0.4 2,751,925 - -0.7 2,751,925 - +0.4 2,751,939 + +0.4 2,751,954 + +0.1 2,751,954 + -0.7 2,751,955 - -0.8 2,751,971 - +0.4 2,751,976 + +0.4 2,751,978 + -0.6 2,751,978 + +0.7 2,751,978 + +0.4 2,751,978 + -0.1 2,751,979 - -2.2 2,751,979 - -0.4 2,752,128 - -0.4 2,752,128 - +0.4 2,752,160 + -0.4 2,752,160 + +0.4 2,752,160 + +0.3 2,752,160 + +1.0 2,752,160 + +1.2 2,752,161 - -1.5 2,752,161 - -0.1 2,752,162 + +0.6 2,752,163 - -0.4 2,752,165 - +0.4 2,752,331 + CA264_11830 0.16 -0.3 2,752,331 + CA264_11830 0.16 +0.2 2,752,332 - CA264_11830 0.16 -0.4 2,752,386 - CA264_11830 0.20 +0.6 2,752,386 - CA264_11830 0.20 +0.5 2,752,386 - CA264_11830 0.20 -0.3 2,752,393 - CA264_11830 0.21 +1.5 2,752,410 - CA264_11830 0.22 +0.3 2,752,516 + CA264_11830 0.31 +0.5 2,752,520 - CA264_11830 0.32 -0.0 2,752,603 + CA264_11830 0.39 +0.1 2,752,833 - CA264_11830 0.58 -0.1 2,752,919 + CA264_11830 0.65 +0.3 2,753,063 + CA264_11830 0.78 +0.9 2,753,139 - CA264_11830 0.84 +0.1 2,753,226 + +0.8 2,753,241 - -0.1 2,753,241 - -1.7 2,753,326 + -1.2 2,753,327 - +1.0 2,753,408 - -0.5 2,753,411 - +0.5 2,753,411 - -0.6 2,753,423 - -0.6 2,753,437 + +0.3 2,753,438 - -0.3 2,753,440 + +0.4 2,753,455 + -0.1 2,753,456 - +0.4 2,753,456 - -2.7 2,753,460 + +1.5 2,753,461 - +0.2 2,753,476 - -1.3 2,753,517 - CA264_11835 0.11 +0.2 2,753,556 - CA264_11835 0.19 +0.6 2,753,556 - CA264_11835 0.19 -0.3 2,753,556 - CA264_11835 0.19 +0.9 2,753,557 + CA264_11835 0.19 -0.5 2,753,557 + CA264_11835 0.19 +1.1 2,753,557 + CA264_11835 0.19 -0.3 2,753,558 - CA264_11835 0.19 +0.4 2,753,558 - CA264_11835 0.19 -1.5 2,753,620 + CA264_11835 0.31 -2.8 2,753,648 + CA264_11835 0.36 +0.1 2,753,665 + CA264_11835 0.39 +1.1 2,753,665 + CA264_11835 0.39 +0.2 2,753,665 + CA264_11835 0.39 +0.8 2,753,665 + CA264_11835 0.39 +0.2 2,753,852 + CA264_11835 0.74 -0.8 2,753,853 - CA264_11835 0.74 +0.8 2,753,853 - CA264_11835 0.74 -0.0 2,753,985 + +0.2 2,753,988 - +0.9 2,753,988 - -0.6 2,753,995 + +0.2 2,754,008 + +0.2 2,754,009 - -0.5 2,754,015 + -0.4 2,754,016 - +0.1 2,754,016 - -0.6 2,754,050 + -0.1 2,754,137 - +0.7 2,754,137 - +0.1 2,754,161 + CA264_11840 0.11 +0.6 2,754,161 + CA264_11840 0.11 -1.1 2,754,162 - CA264_11840 0.11 -2.4 2,754,164 + CA264_11840 0.11 +0.8 2,754,164 + CA264_11840 0.11 +0.1 2,754,165 - CA264_11840 0.11 -0.2 2,754,244 + CA264_11840 0.17 -0.4 2,754,285 + CA264_11840 0.20 -1.2 2,754,285 + CA264_11840 0.20 +0.0 2,754,286 - CA264_11840 0.20 -0.0 2,754,286 - CA264_11840 0.20 +1.1
Or see this region's nucleotide sequence