Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08995 and CA264_09000 are separated by 10 nucleotides CA264_09000 and CA264_09005 are separated by 282 nucleotides CA264_09005 and CA264_09010 are separated by 14 nucleotides
CA264_08995: CA264_08995 - FAD-dependent oxidoreductase, at 2,100,808 to 2,102,205
_08995
CA264_09000: CA264_09000 - hypothetical protein, at 2,102,216 to 2,102,473
_09000
CA264_09005: CA264_09005 - hypothetical protein, at 2,102,756 to 2,103,265
_09005
CA264_09010: CA264_09010 - PAS domain-containing sensor histidine kinase, at 2,103,280 to 2,104,806
_09010
Position (kb)
2102
2103 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2101.219 kb on - strand, within CA264_08995 at 2101.221 kb on - strand, within CA264_08995 at 2101.278 kb on + strand, within CA264_08995 at 2101.280 kb on + strand, within CA264_08995 at 2101.281 kb on - strand, within CA264_08995 at 2101.349 kb on + strand, within CA264_08995 at 2101.352 kb on - strand, within CA264_08995 at 2101.352 kb on - strand, within CA264_08995 at 2101.377 kb on - strand, within CA264_08995 at 2101.543 kb on + strand, within CA264_08995 at 2101.544 kb on - strand, within CA264_08995 at 2101.597 kb on + strand, within CA264_08995 at 2101.659 kb on + strand, within CA264_08995 at 2101.666 kb on + strand, within CA264_08995 at 2101.666 kb on + strand, within CA264_08995 at 2101.666 kb on + strand, within CA264_08995 at 2101.666 kb on + strand, within CA264_08995 at 2101.667 kb on - strand, within CA264_08995 at 2101.701 kb on + strand, within CA264_08995 at 2101.701 kb on + strand, within CA264_08995 at 2101.701 kb on + strand, within CA264_08995 at 2101.702 kb on - strand, within CA264_08995 at 2101.706 kb on - strand, within CA264_08995 at 2101.706 kb on - strand, within CA264_08995 at 2101.706 kb on - strand, within CA264_08995 at 2101.785 kb on - strand, within CA264_08995 at 2101.869 kb on - strand, within CA264_08995 at 2101.989 kb on + strand, within CA264_08995 at 2101.997 kb on + strand, within CA264_08995 at 2102.226 kb on + strand at 2102.227 kb on - strand at 2102.281 kb on + strand, within CA264_09000 at 2102.281 kb on + strand, within CA264_09000 at 2102.285 kb on + strand, within CA264_09000 at 2102.285 kb on + strand, within CA264_09000 at 2102.286 kb on - strand, within CA264_09000 at 2102.309 kb on - strand, within CA264_09000 at 2102.338 kb on + strand, within CA264_09000 at 2102.338 kb on + strand, within CA264_09000 at 2102.339 kb on - strand, within CA264_09000 at 2102.339 kb on - strand, within CA264_09000 at 2102.415 kb on - strand, within CA264_09000 at 2102.435 kb on + strand, within CA264_09000 at 2102.441 kb on + strand, within CA264_09000 at 2102.441 kb on + strand, within CA264_09000 at 2102.442 kb on - strand, within CA264_09000 at 2102.448 kb on - strand at 2102.448 kb on - strand at 2102.486 kb on + strand at 2102.486 kb on + strand at 2102.487 kb on - strand at 2102.487 kb on - strand at 2102.524 kb on + strand at 2102.525 kb on - strand at 2102.528 kb on + strand at 2102.528 kb on + strand at 2102.531 kb on + strand at 2102.531 kb on + strand at 2102.535 kb on + strand at 2102.536 kb on - strand at 2102.621 kb on + strand at 2102.621 kb on + strand at 2102.622 kb on - strand at 2102.642 kb on - strand at 2102.705 kb on + strand at 2102.706 kb on - strand at 2102.706 kb on - strand at 2102.712 kb on + strand at 2102.713 kb on - strand at 2102.726 kb on - strand at 2102.731 kb on + strand at 2102.732 kb on - strand at 2102.735 kb on + strand at 2102.735 kb on + strand at 2102.735 kb on + strand at 2102.736 kb on - strand at 2102.736 kb on - strand at 2102.738 kb on + strand at 2102.738 kb on + strand at 2102.739 kb on - strand at 2102.844 kb on + strand, within CA264_09005 at 2102.868 kb on + strand, within CA264_09005 at 2102.868 kb on + strand, within CA264_09005 at 2102.869 kb on - strand, within CA264_09005 at 2102.869 kb on - strand, within CA264_09005 at 2102.921 kb on + strand, within CA264_09005 at 2103.198 kb on - strand, within CA264_09005 at 2103.198 kb on - strand, within CA264_09005 at 2103.198 kb on - strand, within CA264_09005 at 2103.281 kb on + strand at 2103.284 kb on - strand at 2103.294 kb on + strand at 2103.295 kb on - strand at 2103.331 kb on + strand at 2103.331 kb on + strand at 2103.332 kb on - strand at 2103.332 kb on - strand at 2103.377 kb on + strand at 2103.378 kb on - strand at 2103.400 kb on + strand at 2103.400 kb on + strand at 2103.401 kb on - strand at 2103.401 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 2,101,219 - CA264_08995 0.29 +0.9 2,101,221 - CA264_08995 0.30 -0.6 2,101,278 + CA264_08995 0.34 +0.8 2,101,280 + CA264_08995 0.34 +0.9 2,101,281 - CA264_08995 0.34 -0.2 2,101,349 + CA264_08995 0.39 +0.3 2,101,352 - CA264_08995 0.39 -0.8 2,101,352 - CA264_08995 0.39 +0.0 2,101,377 - CA264_08995 0.41 -0.9 2,101,543 + CA264_08995 0.53 -0.6 2,101,544 - CA264_08995 0.53 -0.7 2,101,597 + CA264_08995 0.56 -0.3 2,101,659 + CA264_08995 0.61 -0.8 2,101,666 + CA264_08995 0.61 -0.7 2,101,666 + CA264_08995 0.61 +0.5 2,101,666 + CA264_08995 0.61 -1.3 2,101,666 + CA264_08995 0.61 +0.2 2,101,667 - CA264_08995 0.61 -0.8 2,101,701 + CA264_08995 0.64 +0.2 2,101,701 + CA264_08995 0.64 -0.4 2,101,701 + CA264_08995 0.64 -0.1 2,101,702 - CA264_08995 0.64 +0.1 2,101,706 - CA264_08995 0.64 -1.1 2,101,706 - CA264_08995 0.64 +0.7 2,101,706 - CA264_08995 0.64 -0.5 2,101,785 - CA264_08995 0.70 -0.8 2,101,869 - CA264_08995 0.76 +2.8 2,101,989 + CA264_08995 0.84 -0.1 2,101,997 + CA264_08995 0.85 +0.1 2,102,226 + -0.7 2,102,227 - +0.1 2,102,281 + CA264_09000 0.25 -1.0 2,102,281 + CA264_09000 0.25 +0.8 2,102,285 + CA264_09000 0.27 -1.6 2,102,285 + CA264_09000 0.27 +0.5 2,102,286 - CA264_09000 0.27 +1.7 2,102,309 - CA264_09000 0.36 +0.3 2,102,338 + CA264_09000 0.47 +0.1 2,102,338 + CA264_09000 0.47 -0.3 2,102,339 - CA264_09000 0.48 -1.3 2,102,339 - CA264_09000 0.48 -0.6 2,102,415 - CA264_09000 0.77 +0.2 2,102,435 + CA264_09000 0.85 -0.4 2,102,441 + CA264_09000 0.87 +0.2 2,102,441 + CA264_09000 0.87 +0.1 2,102,442 - CA264_09000 0.88 -0.0 2,102,448 - -0.4 2,102,448 - -0.5 2,102,486 + +3.7 2,102,486 + +0.3 2,102,487 - +1.0 2,102,487 - -1.1 2,102,524 + -0.2 2,102,525 - -1.3 2,102,528 + +0.3 2,102,528 + -0.3 2,102,531 + -0.1 2,102,531 + +0.4 2,102,535 + -0.3 2,102,536 - +1.3 2,102,621 + +0.3 2,102,621 + -0.5 2,102,622 - +0.4 2,102,642 - -1.2 2,102,705 + -0.1 2,102,706 - -0.5 2,102,706 - +0.7 2,102,712 + +1.0 2,102,713 - +0.2 2,102,726 - +0.2 2,102,731 + +0.6 2,102,732 - +0.7 2,102,735 + +0.3 2,102,735 + +1.1 2,102,735 + +1.0 2,102,736 - -1.2 2,102,736 - -0.0 2,102,738 + +1.2 2,102,738 + -1.1 2,102,739 - +0.6 2,102,844 + CA264_09005 0.17 +1.4 2,102,868 + CA264_09005 0.22 -0.7 2,102,868 + CA264_09005 0.22 +0.7 2,102,869 - CA264_09005 0.22 +0.9 2,102,869 - CA264_09005 0.22 +0.3 2,102,921 + CA264_09005 0.32 +0.6 2,103,198 - CA264_09005 0.87 -0.3 2,103,198 - CA264_09005 0.87 +0.4 2,103,198 - CA264_09005 0.87 +0.2 2,103,281 + -0.1 2,103,284 - +1.0 2,103,294 + +0.3 2,103,295 - +2.2 2,103,331 + +0.2 2,103,331 + +0.0 2,103,332 - +0.2 2,103,332 - -0.3 2,103,377 + +0.4 2,103,378 - -0.2 2,103,400 + +1.0 2,103,400 + -0.1 2,103,401 - -0.7 2,103,401 - +0.5
Or see this region's nucleotide sequence