Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_08065
Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. D-Cycloserine 0.032 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,861,578 | - | CA264_08060 | 0.50 | -0.1 | |
1,861,669 | - | CA264_08060 | 0.56 | -0.1 | |
1,861,700 | + | CA264_08060 | 0.59 | -0.2 | |
1,861,780 | + | CA264_08060 | 0.65 | -0.6 | |
1,861,780 | + | CA264_08060 | 0.65 | -0.2 | |
1,861,841 | + | CA264_08060 | 0.69 | +1.0 | |
1,862,040 | + | CA264_08060 | 0.84 | +0.5 | |
1,862,041 | - | CA264_08060 | 0.85 | -0.3 | |
1,862,046 | + | CA264_08060 | 0.85 | +0.1 | |
1,862,046 | + | CA264_08060 | 0.85 | +0.9 | |
1,862,050 | - | CA264_08060 | 0.85 | -0.3 | |
1,862,077 | + | CA264_08060 | 0.87 | +0.0 | |
1,862,229 | + | -0.4 | |||
1,862,272 | - | -0.2 | |||
1,862,274 | - | -1.0 | |||
1,862,274 | - | -0.5 | |||
1,862,336 | - | -0.1 | |||
1,862,438 | + | -1.4 | |||
1,862,438 | + | +0.3 | |||
1,862,438 | + | -0.9 | |||
1,862,439 | - | -2.3 | |||
1,862,439 | - | +0.7 | |||
1,863,563 | - | +0.8 | |||
1,863,567 | - | +0.3 | |||
1,863,574 | + | -1.1 | |||
1,863,648 | + | +0.2 | |||
1,863,649 | - | +0.6 | |||
1,863,650 | + | -0.8 | |||
1,863,658 | + | +0.3 | |||
1,863,659 | - | +0.2 | |||
1,863,659 | - | +0.1 | |||
1,863,697 | + | -0.9 | |||
1,863,854 | - | CA264_08070 | 0.11 | +0.4 | |
1,864,366 | + | CA264_08070 | 0.42 | -0.4 |
Or see this region's nucleotide sequence