Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07575 and CA264_07580 are separated by 16 nucleotides CA264_07580 and CA264_07585 are separated by 160 nucleotides
CA264_07575: CA264_07575 - agmatinase, at 1,756,023 to 1,757,093
_07575
CA264_07580: CA264_07580 - spermidine synthase, at 1,757,110 to 1,758,417
_07580
CA264_07585: CA264_07585 - hypothetical protein, at 1,758,578 to 1,759,390
_07585
Position (kb)
1757
1758
1759 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1757.111 kb on + strand at 1757.202 kb on - strand at 1757.202 kb on - strand at 1757.312 kb on + strand, within CA264_07580 at 1757.370 kb on - strand, within CA264_07580 at 1757.378 kb on + strand, within CA264_07580 at 1757.472 kb on - strand, within CA264_07580 at 1757.540 kb on + strand, within CA264_07580 at 1757.567 kb on + strand, within CA264_07580 at 1757.724 kb on + strand, within CA264_07580 at 1757.807 kb on + strand, within CA264_07580 at 1757.808 kb on - strand, within CA264_07580 at 1757.813 kb on + strand, within CA264_07580 at 1757.813 kb on + strand, within CA264_07580 at 1757.813 kb on + strand, within CA264_07580 at 1757.813 kb on + strand, within CA264_07580 at 1757.814 kb on - strand, within CA264_07580 at 1757.900 kb on + strand, within CA264_07580 at 1757.918 kb on + strand, within CA264_07580 at 1757.918 kb on + strand, within CA264_07580 at 1758.011 kb on - strand, within CA264_07580 at 1758.013 kb on - strand, within CA264_07580 at 1758.018 kb on + strand, within CA264_07580 at 1758.135 kb on - strand, within CA264_07580 at 1758.140 kb on + strand, within CA264_07580 at 1758.140 kb on + strand, within CA264_07580 at 1758.141 kb on - strand, within CA264_07580 at 1758.340 kb on + strand at 1758.341 kb on - strand at 1758.407 kb on - strand at 1758.426 kb on - strand at 1758.427 kb on + strand at 1758.428 kb on - strand at 1758.428 kb on - strand at 1758.474 kb on + strand at 1758.487 kb on - strand at 1758.505 kb on + strand at 1758.505 kb on + strand at 1758.544 kb on + strand at 1758.545 kb on - strand at 1758.615 kb on - strand at 1758.748 kb on + strand, within CA264_07585 at 1758.756 kb on + strand, within CA264_07585 at 1758.757 kb on - strand, within CA264_07585 at 1758.759 kb on + strand, within CA264_07585 at 1758.760 kb on - strand, within CA264_07585 at 1758.852 kb on + strand, within CA264_07585 at 1758.871 kb on + strand, within CA264_07585 at 1758.877 kb on - strand, within CA264_07585 at 1758.935 kb on + strand, within CA264_07585 at 1758.955 kb on + strand, within CA264_07585 at 1759.028 kb on - strand, within CA264_07585 at 1759.071 kb on + strand, within CA264_07585 at 1759.159 kb on + strand, within CA264_07585 at 1759.160 kb on - strand, within CA264_07585 at 1759.273 kb on - strand, within CA264_07585 at 1759.317 kb on - strand at 1759.410 kb on + strand at 1759.410 kb on + strand at 1759.410 kb on + strand at 1759.410 kb on + strand at 1759.411 kb on - strand at 1759.411 kb on - strand at 1759.414 kb on + strand at 1759.415 kb on - strand at 1759.415 kb on - strand at 1759.415 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 1,757,111 + +0.2 1,757,202 - -0.2 1,757,202 - +0.0 1,757,312 + CA264_07580 0.15 +0.1 1,757,370 - CA264_07580 0.20 -0.3 1,757,378 + CA264_07580 0.20 +1.6 1,757,472 - CA264_07580 0.28 -0.1 1,757,540 + CA264_07580 0.33 +0.3 1,757,567 + CA264_07580 0.35 -0.4 1,757,724 + CA264_07580 0.47 -0.5 1,757,807 + CA264_07580 0.53 +0.5 1,757,808 - CA264_07580 0.53 -0.8 1,757,813 + CA264_07580 0.54 +2.6 1,757,813 + CA264_07580 0.54 +0.3 1,757,813 + CA264_07580 0.54 +0.0 1,757,813 + CA264_07580 0.54 +1.4 1,757,814 - CA264_07580 0.54 +0.8 1,757,900 + CA264_07580 0.60 +0.2 1,757,918 + CA264_07580 0.62 +0.3 1,757,918 + CA264_07580 0.62 +0.2 1,758,011 - CA264_07580 0.69 +0.0 1,758,013 - CA264_07580 0.69 -1.1 1,758,018 + CA264_07580 0.69 +0.3 1,758,135 - CA264_07580 0.78 +0.4 1,758,140 + CA264_07580 0.79 +0.2 1,758,140 + CA264_07580 0.79 +0.5 1,758,141 - CA264_07580 0.79 -0.6 1,758,340 + +0.9 1,758,341 - +0.6 1,758,407 - +0.2 1,758,426 - -0.3 1,758,427 + +0.3 1,758,428 - -0.3 1,758,428 - -0.2 1,758,474 + -0.4 1,758,487 - -2.2 1,758,505 + -1.0 1,758,505 + -1.8 1,758,544 + +0.2 1,758,545 - -0.6 1,758,615 - -0.1 1,758,748 + CA264_07585 0.21 -0.3 1,758,756 + CA264_07585 0.22 -0.2 1,758,757 - CA264_07585 0.22 +0.4 1,758,759 + CA264_07585 0.22 -0.9 1,758,760 - CA264_07585 0.22 -0.5 1,758,852 + CA264_07585 0.34 -0.8 1,758,871 + CA264_07585 0.36 -0.0 1,758,877 - CA264_07585 0.37 +0.6 1,758,935 + CA264_07585 0.44 -1.2 1,758,955 + CA264_07585 0.46 -1.1 1,759,028 - CA264_07585 0.55 -0.4 1,759,071 + CA264_07585 0.61 -1.2 1,759,159 + CA264_07585 0.71 -2.6 1,759,160 - CA264_07585 0.72 +0.4 1,759,273 - CA264_07585 0.85 +0.3 1,759,317 - -1.1 1,759,410 + -0.4 1,759,410 + +0.3 1,759,410 + -1.8 1,759,410 + -0.3 1,759,411 - +0.4 1,759,411 - -0.7 1,759,414 + +1.6 1,759,415 - +0.6 1,759,415 - +0.0 1,759,415 - -1.3
Or see this region's nucleotide sequence