Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05010 and CA264_05015 overlap by 2 nucleotides CA264_05015 and CA264_05020 are separated by 3 nucleotides CA264_05020 and CA264_05025 are separated by 124 nucleotides CA264_05025 and CA264_05030 are separated by 6 nucleotides
CA264_05010: CA264_05010 - hypothetical protein, at 1,163,866 to 1,164,732
_05010
CA264_05015: CA264_05015 - hypothetical protein, at 1,164,731 to 1,164,955
_05015
CA264_05020: CA264_05020 - hypothetical protein, at 1,164,959 to 1,165,408
_05020
CA264_05025: CA264_05025 - ATP phosphoribosyltransferase, at 1,165,533 to 1,166,384
_05025
CA264_05030: CA264_05030 - histidinol dehydrogenase, at 1,166,391 to 1,167,680
_05030
Position (kb)
1165
1166
1167 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1164.587 kb on + strand, within CA264_05010 at 1164.597 kb on + strand, within CA264_05010 at 1164.764 kb on - strand at 1164.764 kb on - strand, within CA264_05015 at 1164.764 kb on - strand, within CA264_05015 at 1164.764 kb on - strand, within CA264_05015 at 1164.771 kb on + strand, within CA264_05015 at 1164.771 kb on + strand, within CA264_05015 at 1164.772 kb on - strand, within CA264_05015 at 1165.073 kb on + strand, within CA264_05020 at 1165.075 kb on + strand, within CA264_05020 at 1165.076 kb on - strand, within CA264_05020 at 1165.076 kb on - strand, within CA264_05020 at 1165.076 kb on - strand, within CA264_05020 at 1165.078 kb on + strand, within CA264_05020 at 1165.165 kb on + strand, within CA264_05020 at 1165.184 kb on - strand, within CA264_05020 at 1165.231 kb on + strand, within CA264_05020 at 1165.231 kb on + strand, within CA264_05020 at 1165.250 kb on + strand, within CA264_05020 at 1165.252 kb on + strand, within CA264_05020 at 1165.262 kb on + strand, within CA264_05020 at 1165.263 kb on - strand, within CA264_05020 at 1165.268 kb on + strand, within CA264_05020 at 1165.269 kb on - strand, within CA264_05020 at 1165.269 kb on - strand, within CA264_05020 at 1165.282 kb on + strand, within CA264_05020 at 1165.308 kb on + strand, within CA264_05020 at 1165.317 kb on - strand, within CA264_05020 at 1165.337 kb on + strand, within CA264_05020 at 1165.338 kb on - strand, within CA264_05020 at 1165.399 kb on + strand at 1165.416 kb on - strand at 1165.424 kb on + strand at 1165.425 kb on - strand at 1165.431 kb on - strand at 1165.431 kb on - strand at 1165.435 kb on + strand at 1165.435 kb on + strand at 1165.435 kb on + strand at 1165.497 kb on - strand at 1165.499 kb on + strand at 1165.511 kb on + strand at 1165.516 kb on + strand at 1165.516 kb on + strand at 1165.525 kb on + strand at 1165.529 kb on + strand at 1165.529 kb on + strand at 1165.529 kb on + strand at 1165.529 kb on + strand at 1165.538 kb on - strand at 1165.543 kb on + strand at 1165.543 kb on + strand at 1165.544 kb on - strand at 1165.544 kb on - strand at 1165.604 kb on + strand at 1165.616 kb on - strand at 1165.616 kb on - strand at 1165.633 kb on + strand, within CA264_05025 at 1165.836 kb on + strand, within CA264_05025 at 1165.931 kb on + strand, within CA264_05025 at 1165.938 kb on - strand, within CA264_05025 at 1166.114 kb on - strand, within CA264_05025 at 1166.170 kb on - strand, within CA264_05025 at 1166.195 kb on + strand, within CA264_05025 at 1166.230 kb on + strand, within CA264_05025 at 1166.231 kb on - strand, within CA264_05025 at 1166.231 kb on - strand, within CA264_05025 at 1166.287 kb on + strand, within CA264_05025 at 1166.350 kb on + strand at 1166.382 kb on + strand at 1166.396 kb on + strand at 1166.404 kb on + strand at 1166.405 kb on - strand at 1166.492 kb on + strand at 1166.492 kb on + strand at 1166.493 kb on - strand at 1166.575 kb on + strand, within CA264_05030 at 1166.638 kb on + strand, within CA264_05030 at 1166.639 kb on - strand, within CA264_05030 at 1166.639 kb on - strand, within CA264_05030 at 1166.639 kb on - strand, within CA264_05030 at 1166.647 kb on - strand, within CA264_05030 at 1166.647 kb on - strand, within CA264_05030 at 1166.656 kb on + strand, within CA264_05030 at 1166.656 kb on + strand, within CA264_05030 at 1166.657 kb on - strand, within CA264_05030 at 1166.698 kb on + strand, within CA264_05030 at 1166.760 kb on + strand, within CA264_05030 at 1166.853 kb on - strand, within CA264_05030 at 1166.879 kb on - strand, within CA264_05030 at 1166.888 kb on + strand, within CA264_05030 at 1166.888 kb on + strand, within CA264_05030 at 1166.889 kb on - strand, within CA264_05030 at 1166.891 kb on - strand, within CA264_05030 at 1166.891 kb on - strand, within CA264_05030 at 1166.895 kb on + strand, within CA264_05030 at 1166.895 kb on + strand, within CA264_05030 at 1166.896 kb on - strand, within CA264_05030 at 1166.896 kb on - strand, within CA264_05030 at 1167.002 kb on - strand, within CA264_05030 at 1167.021 kb on + strand, within CA264_05030 at 1167.025 kb on + strand, within CA264_05030 at 1167.025 kb on + strand, within CA264_05030 at 1167.133 kb on + strand, within CA264_05030 at 1167.133 kb on + strand, within CA264_05030 at 1167.145 kb on + strand, within CA264_05030 at 1167.190 kb on + strand, within CA264_05030 at 1167.287 kb on + strand, within CA264_05030 at 1167.299 kb on + strand, within CA264_05030 at 1167.300 kb on - strand, within CA264_05030 at 1167.338 kb on + strand, within CA264_05030
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 1,164,587 + CA264_05010 0.83 -0.1 1,164,597 + CA264_05010 0.84 -1.2 1,164,764 - +0.8 1,164,764 - CA264_05015 0.15 -1.2 1,164,764 - CA264_05015 0.15 -0.9 1,164,764 - CA264_05015 0.15 -0.4 1,164,771 + CA264_05015 0.18 -0.2 1,164,771 + CA264_05015 0.18 -0.0 1,164,772 - CA264_05015 0.18 +0.1 1,165,073 + CA264_05020 0.25 -0.4 1,165,075 + CA264_05020 0.26 -0.5 1,165,076 - CA264_05020 0.26 +0.9 1,165,076 - CA264_05020 0.26 -0.3 1,165,076 - CA264_05020 0.26 -0.5 1,165,078 + CA264_05020 0.26 -2.0 1,165,165 + CA264_05020 0.46 +0.6 1,165,184 - CA264_05020 0.50 -1.7 1,165,231 + CA264_05020 0.60 -0.7 1,165,231 + CA264_05020 0.60 -0.4 1,165,250 + CA264_05020 0.65 -1.4 1,165,252 + CA264_05020 0.65 -1.0 1,165,262 + CA264_05020 0.67 -0.8 1,165,263 - CA264_05020 0.68 -0.8 1,165,268 + CA264_05020 0.69 -1.3 1,165,269 - CA264_05020 0.69 -0.7 1,165,269 - CA264_05020 0.69 -0.6 1,165,282 + CA264_05020 0.72 +1.1 1,165,308 + CA264_05020 0.78 -0.7 1,165,317 - CA264_05020 0.80 +0.3 1,165,337 + CA264_05020 0.84 +0.8 1,165,338 - CA264_05020 0.84 +0.2 1,165,399 + -0.7 1,165,416 - +0.3 1,165,424 + -1.6 1,165,425 - -0.3 1,165,431 - -0.6 1,165,431 - -1.5 1,165,435 + -0.8 1,165,435 + -1.7 1,165,435 + -0.6 1,165,497 - +0.2 1,165,499 + -2.2 1,165,511 + -1.3 1,165,516 + -1.9 1,165,516 + -0.9 1,165,525 + -0.5 1,165,529 + -1.5 1,165,529 + -0.8 1,165,529 + -0.4 1,165,529 + -2.1 1,165,538 - -0.3 1,165,543 + -0.4 1,165,543 + -1.0 1,165,544 - -0.4 1,165,544 - +0.5 1,165,604 + -2.5 1,165,616 - -1.6 1,165,616 - -0.6 1,165,633 + CA264_05025 0.12 -0.6 1,165,836 + CA264_05025 0.36 -1.3 1,165,931 + CA264_05025 0.47 +0.2 1,165,938 - CA264_05025 0.48 +0.2 1,166,114 - CA264_05025 0.68 -1.0 1,166,170 - CA264_05025 0.75 -0.4 1,166,195 + CA264_05025 0.78 -1.6 1,166,230 + CA264_05025 0.82 -0.9 1,166,231 - CA264_05025 0.82 -0.9 1,166,231 - CA264_05025 0.82 -0.4 1,166,287 + CA264_05025 0.88 +2.2 1,166,350 + -0.1 1,166,382 + -0.8 1,166,396 + +0.1 1,166,404 + -0.4 1,166,405 - +0.8 1,166,492 + +0.2 1,166,492 + +0.5 1,166,493 - -0.1 1,166,575 + CA264_05030 0.14 +0.5 1,166,638 + CA264_05030 0.19 +0.3 1,166,639 - CA264_05030 0.19 +0.2 1,166,639 - CA264_05030 0.19 -1.2 1,166,639 - CA264_05030 0.19 +0.5 1,166,647 - CA264_05030 0.20 -1.0 1,166,647 - CA264_05030 0.20 -0.0 1,166,656 + CA264_05030 0.21 -3.2 1,166,656 + CA264_05030 0.21 -0.6 1,166,657 - CA264_05030 0.21 -0.4 1,166,698 + CA264_05030 0.24 -0.8 1,166,760 + CA264_05030 0.29 -0.3 1,166,853 - CA264_05030 0.36 -0.6 1,166,879 - CA264_05030 0.38 -1.4 1,166,888 + CA264_05030 0.39 -0.0 1,166,888 + CA264_05030 0.39 -1.0 1,166,889 - CA264_05030 0.39 +0.1 1,166,891 - CA264_05030 0.39 +0.3 1,166,891 - CA264_05030 0.39 +0.5 1,166,895 + CA264_05030 0.39 +0.2 1,166,895 + CA264_05030 0.39 +1.6 1,166,896 - CA264_05030 0.39 -0.1 1,166,896 - CA264_05030 0.39 -0.1 1,167,002 - CA264_05030 0.47 -0.9 1,167,021 + CA264_05030 0.49 -1.8 1,167,025 + CA264_05030 0.49 -0.9 1,167,025 + CA264_05030 0.49 -0.4 1,167,133 + CA264_05030 0.58 +0.8 1,167,133 + CA264_05030 0.58 +1.2 1,167,145 + CA264_05030 0.58 +0.2 1,167,190 + CA264_05030 0.62 -0.0 1,167,287 + CA264_05030 0.69 -0.9 1,167,299 + CA264_05030 0.70 -0.4 1,167,300 - CA264_05030 0.70 -0.3 1,167,338 + CA264_05030 0.73 -1.2
Or see this region's nucleotide sequence