Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02175 and CA264_02180 are separated by 313 nucleotides CA264_02180 and CA264_02185 are separated by 156 nucleotides CA264_02185 and CA264_02190 are separated by 89 nucleotides
CA264_02175: CA264_02175 - acyl-CoA desaturase, at 501,120 to 502,232
_02175
CA264_02180: CA264_02180 - response regulator, at 502,546 to 502,914
_02180
CA264_02185: CA264_02185 - GNAT family N-acetyltransferase, at 503,071 to 503,595
_02185
CA264_02190: CA264_02190 - hypothetical protein, at 503,685 to 504,674
_02190
Position (kb)
502
503 Strain fitness (log2 ratio)
-2
-1
0
1 at 501.594 kb on + strand, within CA264_02175 at 501.594 kb on + strand, within CA264_02175 at 501.595 kb on - strand, within CA264_02175 at 501.616 kb on - strand, within CA264_02175 at 501.630 kb on + strand, within CA264_02175 at 501.649 kb on - strand, within CA264_02175 at 501.678 kb on + strand, within CA264_02175 at 501.704 kb on - strand, within CA264_02175 at 501.704 kb on - strand, within CA264_02175 at 501.768 kb on + strand, within CA264_02175 at 501.769 kb on - strand, within CA264_02175 at 501.769 kb on - strand, within CA264_02175 at 501.974 kb on + strand, within CA264_02175 at 502.017 kb on + strand, within CA264_02175 at 502.129 kb on + strand at 502.129 kb on + strand at 502.129 kb on + strand at 502.130 kb on - strand at 502.130 kb on - strand at 502.130 kb on - strand at 502.130 kb on - strand at 502.135 kb on - strand at 502.135 kb on - strand at 502.135 kb on - strand at 502.135 kb on - strand at 502.242 kb on + strand at 502.243 kb on - strand at 502.245 kb on - strand at 502.245 kb on - strand at 502.250 kb on - strand at 502.250 kb on - strand at 502.463 kb on - strand at 502.471 kb on + strand at 502.472 kb on - strand at 502.472 kb on - strand at 502.474 kb on + strand at 502.474 kb on + strand at 502.474 kb on + strand at 502.474 kb on + strand at 502.475 kb on - strand at 502.476 kb on + strand at 502.476 kb on + strand at 502.476 kb on + strand at 502.476 kb on + strand at 502.476 kb on + strand at 502.476 kb on + strand at 502.477 kb on - strand at 502.477 kb on - strand at 502.477 kb on - strand at 502.534 kb on - strand at 502.543 kb on + strand at 502.544 kb on - strand at 502.544 kb on - strand at 502.544 kb on - strand at 502.572 kb on + strand at 502.616 kb on + strand, within CA264_02180 at 502.645 kb on - strand, within CA264_02180 at 502.831 kb on + strand, within CA264_02180 at 502.857 kb on - strand, within CA264_02180 at 502.889 kb on + strand at 502.889 kb on + strand at 502.890 kb on - strand at 502.913 kb on - strand at 502.932 kb on + strand at 502.933 kb on - strand at 502.967 kb on + strand at 503.031 kb on - strand at 503.031 kb on - strand at 503.042 kb on + strand at 503.043 kb on - strand at 503.155 kb on + strand, within CA264_02185 at 503.156 kb on - strand, within CA264_02185 at 503.189 kb on - strand, within CA264_02185 at 503.263 kb on + strand, within CA264_02185 at 503.304 kb on - strand, within CA264_02185 at 503.362 kb on + strand, within CA264_02185 at 503.426 kb on - strand, within CA264_02185 at 503.460 kb on - strand, within CA264_02185 at 503.658 kb on - strand at 503.672 kb on - strand at 503.680 kb on - strand at 503.712 kb on + strand at 503.712 kb on + strand at 503.713 kb on - strand at 503.713 kb on - strand at 503.713 kb on - strand at 503.713 kb on - strand at 503.713 kb on - strand at 503.717 kb on + strand at 503.718 kb on - strand at 503.719 kb on + strand at 503.719 kb on + strand at 503.720 kb on - strand at 503.784 kb on - strand, within CA264_02190 at 503.784 kb on - strand, within CA264_02190 at 503.784 kb on - strand, within CA264_02190
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 501,594 + CA264_02175 0.43 -0.3 501,594 + CA264_02175 0.43 -0.1 501,595 - CA264_02175 0.43 +1.2 501,616 - CA264_02175 0.45 +1.1 501,630 + CA264_02175 0.46 +0.3 501,649 - CA264_02175 0.48 -1.7 501,678 + CA264_02175 0.50 +0.6 501,704 - CA264_02175 0.52 -0.0 501,704 - CA264_02175 0.52 +0.4 501,768 + CA264_02175 0.58 +1.2 501,769 - CA264_02175 0.58 +0.3 501,769 - CA264_02175 0.58 -0.8 501,974 + CA264_02175 0.77 +0.2 502,017 + CA264_02175 0.81 -0.4 502,129 + +1.4 502,129 + -0.2 502,129 + +1.1 502,130 - -0.9 502,130 - +0.6 502,130 - -0.1 502,130 - -0.4 502,135 - +0.2 502,135 - -0.4 502,135 - -0.5 502,135 - -0.3 502,242 + +0.5 502,243 - -0.5 502,245 - -0.7 502,245 - -0.0 502,250 - +0.5 502,250 - -0.1 502,463 - +0.6 502,471 + +1.5 502,472 - -1.4 502,472 - -0.1 502,474 + +0.1 502,474 + +1.2 502,474 + +0.1 502,474 + +1.5 502,475 - +0.4 502,476 + +0.4 502,476 + -1.2 502,476 + +0.3 502,476 + -0.2 502,476 + +0.5 502,476 + +0.3 502,477 - -0.4 502,477 - +0.9 502,477 - +0.3 502,534 - +1.1 502,543 + +0.1 502,544 - -0.6 502,544 - -0.0 502,544 - +0.4 502,572 + +0.9 502,616 + CA264_02180 0.19 -1.2 502,645 - CA264_02180 0.27 -1.8 502,831 + CA264_02180 0.77 -2.4 502,857 - CA264_02180 0.84 -0.3 502,889 + +1.4 502,889 + -1.6 502,890 - -1.1 502,913 - +0.9 502,932 + -0.8 502,933 - -0.6 502,967 + -0.1 503,031 - +0.0 503,031 - -0.1 503,042 + +0.7 503,043 - -0.4 503,155 + CA264_02185 0.16 -1.2 503,156 - CA264_02185 0.16 +0.5 503,189 - CA264_02185 0.22 -0.5 503,263 + CA264_02185 0.37 -0.4 503,304 - CA264_02185 0.44 +0.7 503,362 + CA264_02185 0.55 -0.2 503,426 - CA264_02185 0.68 +1.4 503,460 - CA264_02185 0.74 -0.4 503,658 - -0.6 503,672 - -0.1 503,680 - -0.3 503,712 + -0.3 503,712 + -0.4 503,713 - -0.4 503,713 - +0.1 503,713 - +0.2 503,713 - +0.5 503,713 - -0.0 503,717 + -0.3 503,718 - +0.5 503,719 + +0.2 503,719 + -0.2 503,720 - +0.4 503,784 - CA264_02190 0.10 -0.4 503,784 - CA264_02190 0.10 -1.6 503,784 - CA264_02190 0.10 -1.7
Or see this region's nucleotide sequence