Experiment: m.b. D-Cycloserine 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00550 and CA264_00555 are separated by 205 nucleotides CA264_00555 and CA264_00560 are separated by 170 nucleotides CA264_00560 and CA264_00565 are separated by 59 nucleotides CA264_00565 and CA264_00570 are separated by 219 nucleotides
CA264_00550: CA264_00550 - heme oxygenase, at 123,171 to 123,947
_00550
CA264_00555: CA264_00555 - hypothetical protein, at 124,153 to 124,356
_00555
CA264_00560: CA264_00560 - hypothetical protein, at 124,527 to 124,868
_00560
CA264_00565: CA264_00565 - hypothetical protein, at 124,928 to 125,161
_00565
CA264_00570: CA264_00570 - methionine--tRNA ligase, at 125,381 to 127,420
_00570
Position (kb)
124
125
126 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 124.006 kb on + strand at 124.007 kb on - strand at 124.077 kb on + strand at 124.093 kb on - strand at 124.125 kb on + strand at 124.126 kb on - strand at 124.126 kb on - strand at 124.130 kb on + strand at 124.130 kb on + strand at 124.131 kb on - strand at 124.131 kb on - strand at 124.201 kb on + strand, within CA264_00555 at 124.339 kb on - strand at 124.407 kb on - strand at 124.463 kb on - strand at 124.463 kb on - strand at 124.468 kb on + strand at 124.469 kb on - strand at 124.469 kb on - strand at 124.469 kb on - strand at 124.473 kb on + strand at 124.475 kb on + strand at 124.479 kb on + strand at 124.479 kb on + strand at 124.504 kb on + strand at 124.504 kb on + strand at 124.505 kb on - strand at 124.505 kb on - strand at 124.537 kb on - strand at 124.537 kb on - strand at 124.543 kb on + strand at 124.543 kb on + strand at 124.543 kb on + strand at 124.543 kb on + strand at 124.543 kb on + strand at 124.543 kb on + strand at 124.543 kb on + strand at 124.544 kb on - strand at 124.544 kb on - strand at 124.544 kb on - strand at 124.545 kb on + strand at 124.545 kb on + strand at 124.545 kb on + strand at 124.545 kb on + strand at 124.545 kb on + strand at 124.546 kb on - strand at 124.546 kb on - strand at 124.546 kb on - strand at 124.546 kb on - strand at 124.546 kb on - strand at 124.546 kb on - strand at 124.546 kb on - strand at 124.548 kb on - strand at 124.565 kb on - strand, within CA264_00560 at 124.650 kb on + strand, within CA264_00560 at 124.821 kb on + strand, within CA264_00560 at 124.821 kb on + strand, within CA264_00560 at 124.822 kb on - strand, within CA264_00560 at 124.822 kb on - strand, within CA264_00560 at 124.822 kb on - strand, within CA264_00560 at 124.833 kb on + strand, within CA264_00560 at 124.834 kb on - strand at 124.894 kb on - strand at 125.012 kb on + strand, within CA264_00565 at 125.016 kb on + strand, within CA264_00565 at 125.146 kb on + strand at 125.147 kb on - strand at 125.161 kb on + strand at 125.161 kb on + strand at 125.162 kb on - strand at 125.162 kb on - strand at 125.226 kb on - strand at 125.226 kb on - strand at 125.292 kb on + strand at 125.293 kb on - strand at 125.301 kb on - strand at 125.302 kb on + strand at 125.303 kb on - strand at 125.303 kb on - strand at 125.351 kb on - strand at 125.351 kb on - strand at 125.359 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.032 mg/ml remove 124,006 + -0.2 124,007 - +0.2 124,077 + -1.3 124,093 - +0.3 124,125 + -1.1 124,126 - -0.2 124,126 - +1.7 124,130 + +0.4 124,130 + -0.3 124,131 - -0.4 124,131 - -1.0 124,201 + CA264_00555 0.24 +1.0 124,339 - -1.0 124,407 - +0.0 124,463 - +0.2 124,463 - +0.5 124,468 + -0.3 124,469 - +0.5 124,469 - -0.0 124,469 - -0.7 124,473 + -0.1 124,475 + -0.5 124,479 + -0.9 124,479 + +0.8 124,504 + +0.6 124,504 + -2.3 124,505 - -0.6 124,505 - -0.0 124,537 - +0.4 124,537 - +0.2 124,543 + +1.5 124,543 + -0.6 124,543 + -0.6 124,543 + -0.1 124,543 + -0.7 124,543 + +0.0 124,543 + -0.2 124,544 - +0.4 124,544 - +0.1 124,544 - -0.8 124,545 + -1.6 124,545 + -0.3 124,545 + +0.2 124,545 + +1.2 124,545 + -0.4 124,546 - +0.5 124,546 - -0.4 124,546 - -0.1 124,546 - -0.6 124,546 - -0.3 124,546 - +0.2 124,546 - -0.5 124,548 - +2.0 124,565 - CA264_00560 0.11 +0.1 124,650 + CA264_00560 0.36 -0.6 124,821 + CA264_00560 0.86 +0.5 124,821 + CA264_00560 0.86 -1.0 124,822 - CA264_00560 0.86 -0.0 124,822 - CA264_00560 0.86 -0.2 124,822 - CA264_00560 0.86 +0.2 124,833 + CA264_00560 0.89 -0.3 124,834 - -0.5 124,894 - -1.2 125,012 + CA264_00565 0.36 -0.7 125,016 + CA264_00565 0.38 -0.5 125,146 + -0.2 125,147 - +0.5 125,161 + -0.6 125,161 + -1.3 125,162 - -0.1 125,162 - -0.1 125,226 - +0.7 125,226 - -0.1 125,292 + -0.9 125,293 - -0.2 125,301 - -0.5 125,302 + -0.2 125,303 - -2.6 125,303 - +0.3 125,351 - -0.0 125,351 - +0.2 125,359 - -1.0
Or see this region's nucleotide sequence