Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2806

Experiment: Ammonium chloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ammonium chloride (N)
3,351,748	+		Echvi_2805	0.34	+2.0
3,351,767	+		Echvi_2805	0.36	+0.2
3,351,767	+		Echvi_2805	0.36	-1.9
3,351,768	-		Echvi_2805	0.36	-4.3
3,351,768	-		Echvi_2805	0.36	-0.7
3,351,832	-		Echvi_2805	0.41	-0.4
3,352,031	+		Echvi_2805	0.55	+0.3
3,352,032	-		Echvi_2805	0.56	-0.4
3,352,039	+		Echvi_2805	0.56	+1.0
3,352,040	-		Echvi_2805	0.56	+0.4
3,352,093	+		Echvi_2805	0.60	-0.6
3,352,093	+		Echvi_2805	0.60	-2.7
3,352,093	+		Echvi_2805	0.60	+0.1
3,352,093	+		Echvi_2805	0.60	-0.0
3,352,094	-		Echvi_2805	0.60	+0.4
3,352,095	+		Echvi_2805	0.60	-0.1
3,352,095	+		Echvi_2805	0.60	-0.8
3,352,096	-		Echvi_2805	0.60	-0.5
3,352,097	+		Echvi_2805	0.60	+0.1
3,352,183	-		Echvi_2805	0.67	+0.3
3,352,190	+		Echvi_2805	0.67	-1.5
3,352,191	-		Echvi_2805	0.67	+0.7
3,352,191	-		Echvi_2805	0.67	-0.1
3,352,269	+		Echvi_2805	0.73	+0.3
3,352,269	+		Echvi_2805	0.73	+1.1
3,352,269	+		Echvi_2805	0.73	-1.3
3,352,269	+		Echvi_2805	0.73	+0.8
3,352,270	-		Echvi_2805	0.73	-0.5
3,352,338	+		Echvi_2805	0.78	+0.6
3,352,341	-		Echvi_2805	0.78	-0.8
3,352,380	+		Echvi_2805	0.81	-1.1
3,352,380	+		Echvi_2805	0.81	+1.8
3,352,381	-		Echvi_2805	0.81	+0.2
3,352,381	-		Echvi_2805	0.81	+0.3
3,352,385	+		Echvi_2805	0.82	-0.1
3,352,507	+				-0.4
3,352,508	-				-0.2
3,352,508	-				-1.7
3,352,508	-				+0.7
3,352,529	-				+0.7
3,352,614	+				-0.8
3,352,621	+				-2.0
3,352,634	-				-0.1
3,352,641	+				-0.8
3,352,641	+				-2.4
3,352,642	-				+0.4
3,352,677	+				-0.3
3,352,693	+				+0.2
3,352,726	-				+0.4
3,352,752	-				+0.1
3,352,804	-				+1.4
3,352,865	+				-1.1
3,352,884	+		Echvi_2806	0.10	+0.5
3,352,884	+		Echvi_2806	0.10	-0.3
3,352,888	+		Echvi_2806	0.11	+0.4
3,352,888	+		Echvi_2806	0.11	+0.6
3,352,888	+		Echvi_2806	0.11	+0.8
3,352,889	-		Echvi_2806	0.11	+0.4
3,352,889	-		Echvi_2806	0.11	+0.8
3,352,889	-		Echvi_2806	0.11	-0.2
3,352,918	+		Echvi_2806	0.13	+0.1
3,352,918	+		Echvi_2806	0.13	-0.2
3,352,919	-		Echvi_2806	0.13	-1.3
3,352,927	+		Echvi_2806	0.13	+1.4
3,353,008	+		Echvi_2806	0.19	+0.6
3,353,008	+		Echvi_2806	0.19	-0.5
3,353,090	+		Echvi_2806	0.24	-1.2
3,353,145	-		Echvi_2806	0.28	+1.0
3,353,145	-		Echvi_2806	0.28	-0.4
3,353,263	+		Echvi_2806	0.36	+1.9
3,353,263	+		Echvi_2806	0.36	-0.2
3,353,269	-		Echvi_2806	0.36	-1.0
3,353,291	+		Echvi_2806	0.37	+0.8
3,353,297	+		Echvi_2806	0.38	+0.3
3,353,305	+		Echvi_2806	0.38	+1.0
3,353,305	+		Echvi_2806	0.38	-0.5
3,353,305	+		Echvi_2806	0.38	-0.8
3,353,305	+		Echvi_2806	0.38	+1.8
3,353,306	-		Echvi_2806	0.38	-0.5
3,353,306	-		Echvi_2806	0.38	-1.7
3,353,306	-		Echvi_2806	0.38	+1.3
3,353,337	-		Echvi_2806	0.41	-0.1
3,353,347	-		Echvi_2806	0.41	+0.7
3,353,395	+		Echvi_2806	0.44	-0.5
3,353,427	+		Echvi_2806	0.47	-0.6
3,353,428	-		Echvi_2806	0.47	+2.5
3,353,477	+		Echvi_2806	0.50	-0.2
3,353,478	-		Echvi_2806	0.50	-0.3
3,353,478	-		Echvi_2806	0.50	+1.0
3,353,537	+		Echvi_2806	0.54	+1.3
3,353,740	+		Echvi_2806	0.67	+0.4
3,353,741	-		Echvi_2806	0.68	-0.8
3,353,741	-		Echvi_2806	0.68	-0.1
3,353,742	+		Echvi_2806	0.68	+0.8
3,353,742	+		Echvi_2806	0.68	+0.4
3,353,743	-		Echvi_2806	0.68	+0.2
3,353,743	-		Echvi_2806	0.68	+0.4
3,353,764	+		Echvi_2806	0.69	-0.0
3,353,814	+		Echvi_2806	0.72	+1.3
3,353,814	+		Echvi_2806	0.72	-0.2
3,353,880	-		Echvi_2806	0.77	-1.3
3,353,890	+		Echvi_2806	0.77	+0.5
3,353,890	+		Echvi_2806	0.77	+0.5
3,353,891	-		Echvi_2806	0.78	+0.2
3,353,900	+		Echvi_2806	0.78	+1.1
3,353,901	-		Echvi_2806	0.78	+0.4
3,353,901	-		Echvi_2806	0.78	+0.3
3,353,904	+		Echvi_2806	0.78	-0.9
3,353,904	+		Echvi_2806	0.78	+0.9
3,353,905	-		Echvi_2806	0.78	+0.5
3,353,924	+		Echvi_2806	0.80	+0.4
3,353,924	+		Echvi_2806	0.80	+0.7
3,353,931	-		Echvi_2806	0.80	+0.3
3,353,933	-		Echvi_2806	0.80	+0.7
3,354,001	+		Echvi_2806	0.85	-1.1
3,354,001	+		Echvi_2806	0.85	-0.3
3,354,002	-		Echvi_2806	0.85	+1.0
3,354,049	-		Echvi_2806	0.88	-0.4
3,354,099	+				+0.4
3,354,099	+				-0.5
3,354,197	+				+0.5
3,354,203	+				+0.4
3,354,203	+				-0.7
3,354,205	+				-0.2
3,354,205	+				-0.0
3,354,206	-				-1.2
3,354,206	-				+0.9
3,354,216	+				+0.3
3,354,217	-				+0.2
3,354,217	-				+1.5
3,354,218	+				-0.5
3,354,218	+				+0.2
3,354,218	+				+1.2
3,354,219	-				-0.7
3,354,219	-				+1.0
3,354,275	+				-1.0
3,354,296	+				+0.4
3,354,296	+				+0.8
3,354,345	+				-1.0
3,354,345	+				-0.9
3,354,345	+				+2.4
3,354,345	+				-0.3
3,354,346	-				+0.1
3,354,346	-				+0.6
3,354,346	-				+0.9
3,354,349	-				+0.1
3,354,349	-				+0.8
3,354,349	-				+2.8
3,354,349	-				+1.9
3,354,349	-				-0.0
3,354,375	+				+1.5
3,354,458	+				-0.1
3,354,458	+				+0.3
3,354,459	-				+0.9
3,354,459	-				-0.8
3,354,459	-				-0.5
3,354,459	-				-1.4
3,354,525	+		Echvi_2807	0.14	-1.0
3,354,525	+		Echvi_2807	0.14	+0.5
3,354,717	+		Echvi_2807	0.26	+0.5
3,354,718	-		Echvi_2807	0.26	+1.2
3,354,765	+		Echvi_2807	0.29	-0.0
3,354,765	+		Echvi_2807	0.29	-0.4
3,354,766	-		Echvi_2807	0.29	+2.1
3,354,864	+		Echvi_2807	0.35	+1.9
3,354,881	+		Echvi_2807	0.36	+0.8
3,354,885	+		Echvi_2807	0.36	-1.8
3,354,899	+		Echvi_2807	0.37	+0.8
3,354,900	-		Echvi_2807	0.37	+0.6
3,354,900	-		Echvi_2807	0.37	-1.3
3,354,900	-		Echvi_2807	0.37	-0.7
3,354,900	-		Echvi_2807	0.37	-0.3
3,354,900	-		Echvi_2807	0.37	-0.2
3,354,954	+		Echvi_2807	0.40	-0.5
3,354,954	+		Echvi_2807	0.40	+0.2
3,354,954	+		Echvi_2807	0.40	-1.6
3,354,954	+		Echvi_2807	0.40	+0.8
3,354,954	+		Echvi_2807	0.40	-0.0
3,354,954	+		Echvi_2807	0.40	+0.9
3,354,955	-		Echvi_2807	0.40	+0.3
3,354,955	-		Echvi_2807	0.40	+0.3
3,354,955	-		Echvi_2807	0.40	-1.0
3,354,956	+		Echvi_2807	0.40	-0.7
3,354,956	+		Echvi_2807	0.40	-1.2
3,354,956	+		Echvi_2807	0.40	+1.3
3,354,974	+		Echvi_2807	0.41	+0.5
3,354,974	+		Echvi_2807	0.41	+1.8
3,354,974	+		Echvi_2807	0.41	-0.0
3,354,974	+		Echvi_2807	0.41	+0.5
3,354,975	-		Echvi_2807	0.41	+0.5
3,354,999	+		Echvi_2807	0.43	-0.2
3,354,999	+		Echvi_2807	0.43	-0.7
3,355,016	-		Echvi_2807	0.44	+0.0
3,355,065	-		Echvi_2807	0.47	+1.5
3,355,078	+		Echvi_2807	0.48	+0.5
3,355,226	+		Echvi_2807	0.57	+0.2