Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1782

Experiment: Ammonium chloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ammonium chloride (N)
2,097,066	-		Echvi_1781	0.53	-1.1
2,097,066	-		Echvi_1781	0.53	+0.3
2,097,070	+		Echvi_1781	0.53	-0.6
2,097,071	-		Echvi_1781	0.53	-0.1
2,097,071	-		Echvi_1781	0.53	-0.4
2,097,071	-		Echvi_1781	0.53	+0.2
2,097,254	+		Echvi_1781	0.62	-1.4
2,097,293	+				-0.3
2,097,297	+		Echvi_1781	0.64	-1.7
2,097,297	+		Echvi_1781	0.64	-1.5
2,097,298	-		Echvi_1781	0.64	-0.2
2,097,298	-		Echvi_1781	0.64	+0.2
2,097,298	-		Echvi_1781	0.64	-1.4
2,097,303	-		Echvi_1781	0.64	+0.6
2,097,320	+		Echvi_1781	0.65	-1.1
2,097,329	+		Echvi_1781	0.66	+0.1
2,097,336	-		Echvi_1781	0.66	-1.2
2,097,366	+		Echvi_1781	0.67	+0.3
2,097,397	+		Echvi_1781	0.69	+0.0
2,097,444	+		Echvi_1781	0.71	-1.3
2,097,444	+		Echvi_1781	0.71	+1.4
2,097,445	-		Echvi_1781	0.71	+0.4
2,097,547	+		Echvi_1781	0.76	+1.4
2,097,547	+		Echvi_1781	0.76	-0.2
2,097,547	+		Echvi_1781	0.76	-0.7
2,097,547	+		Echvi_1781	0.76	+0.4
2,097,547	+		Echvi_1781	0.76	-0.1
2,097,548	-		Echvi_1781	0.76	+0.3
2,097,548	-		Echvi_1781	0.76	+1.8
2,097,548	-		Echvi_1781	0.76	-1.7
2,097,548	-		Echvi_1781	0.76	-1.1
2,097,549	+		Echvi_1781	0.76	-0.0
2,097,549	+		Echvi_1781	0.76	-0.3
2,097,549	+		Echvi_1781	0.76	+0.2
2,097,549	+		Echvi_1781	0.76	-0.3
2,097,550	-		Echvi_1781	0.76	+0.2
2,097,550	-		Echvi_1781	0.76	-0.4
2,097,611	+		Echvi_1781	0.79	+1.2
2,097,616	+		Echvi_1781	0.80	-0.1
2,097,616	+		Echvi_1781	0.80	-0.1
2,097,681	+		Echvi_1781	0.83	+0.0
2,097,707	+		Echvi_1781	0.84	+0.3
2,097,721	+		Echvi_1781	0.85	-1.0
2,097,741	+		Echvi_1781	0.86	+0.8
2,097,743	+		Echvi_1781	0.86	+1.0
2,097,743	+		Echvi_1781	0.86	-0.5
2,097,744	-		Echvi_1781	0.86	+1.4
2,097,744	-		Echvi_1781	0.86	-0.8
2,097,744	-		Echvi_1781	0.86	-2.4
2,097,749	-		Echvi_1781	0.86	+0.2
2,097,791	+		Echvi_1781	0.88	+0.1
2,097,796	+		Echvi_1781	0.88	+1.2
2,097,797	-		Echvi_1781	0.88	+0.1
2,097,802	+		Echvi_1781	0.89	+2.1
2,097,802	+		Echvi_1781	0.89	-0.1
2,097,803	-		Echvi_1781	0.89	-0.8
2,097,821	+		Echvi_1781	0.90	+0.2
2,097,834	+				-1.1
2,097,834	+				-3.0
2,097,835	-				-1.1
2,097,835	-				+0.7
2,097,835	-				+1.3
2,097,835	-				+1.0
2,097,835	-				+0.9
2,097,835	-				-0.5
2,097,835	-				-0.3
2,097,835	-				-0.4
2,097,835	-				+0.6
2,097,837	+				-1.6
2,097,838	-				-0.6
2,097,838	-				-0.6
2,097,898	-				+0.4
2,097,930	+				-0.3
2,097,930	+				-0.8
2,097,931	-				-0.4
2,097,931	-				+0.2
2,098,038	+				-1.1
2,098,039	-				+1.0
2,098,040	+				+0.8
2,098,040	+				+0.0
2,098,040	+				-0.7
2,098,040	+				-0.5
2,098,040	+				-0.3
2,098,041	-				+0.1
2,098,042	+				+0.3
2,098,042	+				+0.1
2,098,042	+				+0.9
2,098,042	+				+1.2
2,098,042	+				-0.6
2,098,042	+				-1.0
2,098,159	+		Echvi_1782	0.16	+1.5
2,098,180	-				+0.2
2,098,180	-		Echvi_1782	0.19	-1.2
2,098,307	-		Echvi_1782	0.36	+0.2
2,098,317	-		Echvi_1782	0.38	+1.0
2,098,370	+		Echvi_1782	0.45	-1.0
2,098,370	+		Echvi_1782	0.45	-1.4
2,098,370	+		Echvi_1782	0.45	+0.2
2,098,371	-		Echvi_1782	0.45	+0.9
2,098,371	-		Echvi_1782	0.45	-1.3
2,098,371	-		Echvi_1782	0.45	-1.0
2,098,383	-		Echvi_1782	0.47	-0.2
2,098,417	+		Echvi_1782	0.51	-1.6
2,098,418	-		Echvi_1782	0.51	-2.3
2,098,418	-		Echvi_1782	0.51	+0.5
2,098,488	+		Echvi_1782	0.61	-0.1
2,098,488	+		Echvi_1782	0.61	-0.0
2,098,488	+		Echvi_1782	0.61	-0.4
2,098,526	+		Echvi_1782	0.66	-1.1
2,098,527	-		Echvi_1782	0.66	-1.6
2,098,538	+		Echvi_1782	0.68	-0.2
2,098,538	+		Echvi_1782	0.68	-2.8
2,098,627	+		Echvi_1782	0.80	+0.5
2,098,628	-		Echvi_1782	0.80	+1.2
2,098,628	-		Echvi_1782	0.80	-0.1
2,098,632	+		Echvi_1782	0.80	-1.3
2,098,632	+		Echvi_1782	0.80	-0.1
2,098,633	-		Echvi_1782	0.81	-0.9
2,098,633	-		Echvi_1782	0.81	-0.8
2,098,633	-		Echvi_1782	0.81	+0.3
2,098,633	-		Echvi_1782	0.81	-1.2
2,098,635	-		Echvi_1782	0.81	-0.2
2,098,641	+		Echvi_1782	0.82	-0.1
2,098,643	+		Echvi_1782	0.82	+0.8
2,098,644	-		Echvi_1782	0.82	+0.7
2,098,644	-		Echvi_1782	0.82	-0.8
2,098,652	-		Echvi_1782	0.83	-0.2
2,098,658	+		Echvi_1782	0.84	+0.2
2,098,658	+		Echvi_1782	0.84	+1.9
2,098,659	-		Echvi_1782	0.84	-1.5
2,098,661	+		Echvi_1782	0.84	+1.0
2,098,735	+				+0.6
2,098,735	+				-1.1
2,098,736	-				-0.2
2,098,739	+				-0.2
2,098,795	+				-1.4
2,098,798	+				-0.8
2,098,798	+				-1.6
2,098,798	+				+0.4
2,098,798	+				+0.7
2,098,798	+				-0.1
2,098,799	-				-0.3
2,098,814	+				+1.1
2,098,871	+				+1.2
2,098,872	-				+0.7
2,098,872	-				+1.0
2,098,896	-				-1.3
2,098,896	-				+2.5
2,098,921	+				-0.6
2,099,005	-		Echvi_1783	0.17	+1.3
2,099,005	-		Echvi_1783	0.17	+0.0
2,099,013	+		Echvi_1783	0.19	-1.3
2,099,013	+		Echvi_1783	0.19	+1.3
2,099,014	-		Echvi_1783	0.19	+2.1
2,099,014	-		Echvi_1783	0.19	+0.3
2,099,075	+		Echvi_1783	0.33	+1.5
2,099,075	+		Echvi_1783	0.33	+0.1
2,099,076	-		Echvi_1783	0.33	+0.7
2,099,076	-		Echvi_1783	0.33	-0.4
2,099,185	+		Echvi_1783	0.58	-0.2
2,099,214	+		Echvi_1783	0.64	+0.5
2,099,215	-		Echvi_1783	0.64	-0.6
2,099,261	+		Echvi_1783	0.75	+1.0
2,099,289	+		Echvi_1783	0.81	+1.0
2,099,290	-		Echvi_1783	0.81	+1.0
2,099,306	+		Echvi_1783	0.85	-3.0
2,099,316	+		Echvi_1783	0.87	-2.3
2,099,392	-				+0.0
2,099,398	-				-0.3
2,099,408	+				-0.1
2,099,444	+				-0.5
2,099,511	+				+0.1
2,099,524	-				+0.3
2,099,524	-				+0.2
2,099,524	-				+0.0
2,099,582	+				-0.7
2,099,582	+				+0.9
2,099,583	-				+0.4
2,099,671	+		Echvi_1784	0.13	-1.4
2,099,671	+		Echvi_1784	0.13	+1.0
2,099,671	+		Echvi_1784	0.13	+0.5
2,099,673	+		Echvi_1784	0.13	-0.6
2,099,673	+		Echvi_1784	0.13	+2.3
2,099,726	+		Echvi_1784	0.16	+0.1