Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3794

Experiment: Glucuronamide (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucuronamide (N)
4,526,347	+		Echvi_3793	0.32	-0.3
4,526,348	-		Echvi_3793	0.32	-1.8
4,526,348	-		Echvi_3793	0.32	-1.8
4,526,447	+		Echvi_3793	0.39	-0.2
4,526,450	+		Echvi_3793	0.39	-0.0
4,526,523	-		Echvi_3793	0.44	-1.0
4,526,528	+		Echvi_3793	0.45	-0.1
4,526,528	+		Echvi_3793	0.45	+1.1
4,526,529	-		Echvi_3793	0.45	+1.1
4,526,531	+		Echvi_3793	0.45	-0.5
4,526,532	-		Echvi_3793	0.45	-0.8
4,526,539	+		Echvi_3793	0.45	-0.1
4,526,539	+		Echvi_3793	0.45	-1.8
4,526,559	+		Echvi_3793	0.47	+0.4
4,526,559	+		Echvi_3793	0.47	+0.4
4,526,560	-		Echvi_3793	0.47	-0.4
4,526,564	-		Echvi_3793	0.47	+0.8
4,526,564	-		Echvi_3793	0.47	-0.8
4,526,585	+		Echvi_3793	0.49	+1.9
4,526,585	+		Echvi_3793	0.49	-1.9
4,526,585	+		Echvi_3793	0.49	-0.7
4,526,585	+		Echvi_3793	0.49	-2.3
4,526,586	-		Echvi_3793	0.49	-0.8
4,526,588	-		Echvi_3793	0.49	-1.5
4,526,595	-		Echvi_3793	0.49	-1.0
4,526,595	-		Echvi_3793	0.49	-0.2
4,526,647	-		Echvi_3793	0.53	-1.0
4,526,663	+		Echvi_3793	0.54	-1.7
4,526,664	-		Echvi_3793	0.54	+0.2
4,526,696	-		Echvi_3793	0.57	-0.7
4,526,711	+		Echvi_3793	0.58	+1.0
4,526,728	+		Echvi_3793	0.59	-1.2
4,526,729	-		Echvi_3793	0.59	+0.2
4,526,729	-		Echvi_3793	0.59	+0.5
4,526,731	-		Echvi_3793	0.59	-1.9
4,526,731	-		Echvi_3793	0.59	+0.1
4,526,812	-		Echvi_3793	0.65	+0.7
4,526,815	+		Echvi_3793	0.65	+0.4
4,526,815	+		Echvi_3793	0.65	-0.8
4,526,815	+		Echvi_3793	0.65	+0.1
4,526,815	+		Echvi_3793	0.65	-0.5
4,526,816	-		Echvi_3793	0.65	-2.1
4,526,816	-		Echvi_3793	0.65	-0.1
4,526,908	-		Echvi_3793	0.72	-1.0
4,526,938	-		Echvi_3793	0.74	-0.5
4,526,963	-		Echvi_3793	0.76	+0.7
4,526,994	-		Echvi_3793	0.78	-1.4
4,527,031	-		Echvi_3793	0.80	-1.1
4,527,031	-		Echvi_3793	0.80	-0.1
4,527,266	+				+0.3
4,527,267	-				+1.5
4,527,267	-				-1.4
4,527,292	-				-0.2
4,527,295	+				-1.4
4,527,309	-				-1.0
4,527,340	+				-0.0
4,527,345	+				+0.8
4,527,345	+				+1.1
4,527,345	+				-0.5
4,527,345	+				+0.1
4,527,345	+				-0.0
4,527,345	+				+0.3
4,527,346	-				-1.9
4,527,346	-				-0.6
4,527,346	-				-0.8
4,527,346	-				-1.0
4,527,367	+				+0.5
4,527,367	+				-2.0
4,527,373	+				+0.1
4,527,479	+		Echvi_3794	0.11	-2.4
4,527,479	+		Echvi_3794	0.11	+0.5
4,527,487	+		Echvi_3794	0.11	-0.3
4,527,500	+		Echvi_3794	0.12	-1.1
4,527,530	+		Echvi_3794	0.15	-0.5
4,527,531	-		Echvi_3794	0.15	-2.2
4,527,685	-		Echvi_3794	0.27	-0.1
4,527,711	+		Echvi_3794	0.29	-1.9
4,527,711	+		Echvi_3794	0.29	+0.5
4,527,711	+		Echvi_3794	0.29	-0.3
4,527,711	+		Echvi_3794	0.29	-1.4
4,527,711	+		Echvi_3794	0.29	-1.1
4,527,712	-		Echvi_3794	0.29	-0.3
4,527,712	-		Echvi_3794	0.29	-2.1
4,527,719	+		Echvi_3794	0.30	-1.1
4,527,719	+		Echvi_3794	0.30	-0.2
4,527,802	+		Echvi_3794	0.37	-1.2
4,527,802	+		Echvi_3794	0.37	-0.8
4,527,803	-		Echvi_3794	0.37	-0.4
4,527,824	+		Echvi_3794	0.38	-1.3
4,527,832	-		Echvi_3794	0.39	-0.9
4,527,832	-		Echvi_3794	0.39	-1.8
4,527,887	+		Echvi_3794	0.43	-1.6
4,527,954	-		Echvi_3794	0.49	+0.8
4,527,968	+		Echvi_3794	0.50	-0.7
4,527,968	+		Echvi_3794	0.50	-1.6
4,527,968	+		Echvi_3794	0.50	-0.4
4,528,041	-		Echvi_3794	0.56	-1.6
4,528,057	-		Echvi_3794	0.57	+1.2
4,528,064	-		Echvi_3794	0.58	-0.9
4,528,064	-		Echvi_3794	0.58	-2.4
4,528,065	+		Echvi_3794	0.58	-3.4
4,528,101	+		Echvi_3794	0.61	-2.2
4,528,161	-		Echvi_3794	0.65	+0.3
4,528,166	+		Echvi_3794	0.66	-0.3
4,528,167	-		Echvi_3794	0.66	+0.7
4,528,176	+		Echvi_3794	0.67	-0.3
4,528,176	+		Echvi_3794	0.67	-1.1
4,528,198	-		Echvi_3794	0.68	-2.0
4,528,203	+		Echvi_3794	0.69	-0.1
4,528,257	+		Echvi_3794	0.73	+0.4
4,528,258	-		Echvi_3794	0.73	-0.3
4,528,258	-		Echvi_3794	0.73	-0.5
4,528,313	+		Echvi_3794	0.77	-1.5
4,528,343	+		Echvi_3794	0.80	-1.0
4,528,450	-		Echvi_3794	0.88	-1.1
4,528,450	-		Echvi_3794	0.88	+0.5
4,528,450	-		Echvi_3794	0.88	-0.3
4,528,470	+				-1.1
4,528,470	+				-2.2
4,528,478	+				-2.1
4,528,483	+				-1.1
4,528,488	+				-0.6
4,528,566	-				-1.2
4,528,566	-				-1.4
4,528,568	+				+1.9
4,528,609	+				+0.1
4,528,611	+				-0.7
4,528,612	-				-0.7
4,528,612	-				-1.8
4,528,612	-				-2.0
4,528,612	-				-0.7
4,528,617	+				-1.8
4,528,617	+				-1.2
4,528,617	+				-1.5
4,528,617	+				-1.4
4,528,636	+				-2.2
4,528,637	-				-2.6
4,528,680	+				-0.8
4,528,681	-				-2.1
4,528,700	+				-3.1
4,528,700	+				-0.4
4,528,700	+				+0.4
4,528,701	-				-0.3
4,528,742	-		Echvi_3795	0.13	-0.8
4,528,742	-		Echvi_3795	0.13	-1.5
4,528,858	+		Echvi_3795	0.23	-0.8
4,529,058	+		Echvi_3795	0.40	-0.5
4,529,058	+		Echvi_3795	0.40	-1.4
4,529,068	+		Echvi_3795	0.41	-0.3
4,529,068	+		Echvi_3795	0.41	-2.8
4,529,069	-		Echvi_3795	0.41	-2.6
4,529,146	+		Echvi_3795	0.48	-0.6
4,529,147	-		Echvi_3795	0.48	-1.3
4,529,155	+		Echvi_3795	0.49	-0.3
4,529,156	-		Echvi_3795	0.49	-1.2
4,529,156	-		Echvi_3795	0.49	-0.6
4,529,175	-		Echvi_3795	0.50	-1.4
4,529,331	+		Echvi_3795	0.64	-1.8
4,529,331	+		Echvi_3795	0.64	+0.4
4,529,332	-		Echvi_3795	0.64	-0.6
4,529,332	-		Echvi_3795	0.64	-0.3
4,529,332	-		Echvi_3795	0.64	-0.6
4,529,332	-		Echvi_3795	0.64	-0.3
4,529,332	-		Echvi_3795	0.64	-0.2
4,529,388	-		Echvi_3795	0.69	-0.8
4,529,454	+		Echvi_3795	0.74	-0.3
4,529,466	-		Echvi_3795	0.76	-0.6
4,529,466	-		Echvi_3795	0.76	-1.3
4,529,470	-		Echvi_3795	0.76	-3.0
4,529,519	+		Echvi_3795	0.80	-0.6
4,529,519	+		Echvi_3795	0.80	-2.0
4,529,519	+		Echvi_3795	0.80	+0.1
4,529,520	-		Echvi_3795	0.80	-1.2
4,529,520	-		Echvi_3795	0.80	-1.9
4,529,521	+		Echvi_3795	0.80	+0.6
4,529,521	+		Echvi_3795	0.80	-0.6
4,529,521	+		Echvi_3795	0.80	-1.1
4,529,521	+		Echvi_3795	0.80	-1.1
4,529,521	+		Echvi_3795	0.80	-1.0
4,529,522	-		Echvi_3795	0.80	+0.2
4,529,522	-		Echvi_3795	0.80	-0.7
4,529,522	-		Echvi_3795	0.80	-0.3
4,529,522	-		Echvi_3795	0.80	-1.5
4,529,522	-		Echvi_3795	0.80	-0.1
4,529,548	-		Echvi_3795	0.83	-0.6
4,529,592	-		Echvi_3795	0.86	+0.5