Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20525 and CA264_20530 are separated by 23 nucleotides CA264_20530 and CA264_20535 are separated by 48 nucleotides CA264_20535 and CA264_20540 are separated by 193 nucleotides
CA264_20525: CA264_20525 - prenyltransferase, at 4,728,868 to 4,729,776
_20525
CA264_20530: CA264_20530 - hypothetical protein, at 4,729,800 to 4,730,687
_20530
CA264_20535: CA264_20535 - hypothetical protein, at 4,730,736 to 4,731,239
_20535
CA264_20540: CA264_20540 - transglycosylase, at 4,731,433 to 4,733,763
_20540
Position (kb)
4730
4731
4732 Strain fitness (log2 ratio)
-2
-1
0
1 at 4729.762 kb on - strand at 4729.845 kb on + strand at 4729.914 kb on + strand, within CA264_20530 at 4729.915 kb on - strand, within CA264_20530 at 4729.977 kb on - strand, within CA264_20530 at 4730.005 kb on + strand, within CA264_20530 at 4730.061 kb on + strand, within CA264_20530 at 4730.061 kb on + strand, within CA264_20530 at 4730.269 kb on - strand, within CA264_20530 at 4730.269 kb on - strand, within CA264_20530 at 4730.270 kb on + strand, within CA264_20530 at 4730.306 kb on - strand, within CA264_20530 at 4730.311 kb on + strand, within CA264_20530 at 4730.346 kb on - strand, within CA264_20530 at 4730.488 kb on + strand, within CA264_20530 at 4730.715 kb on + strand at 4730.716 kb on - strand at 4730.729 kb on + strand at 4730.730 kb on - strand at 4730.790 kb on - strand, within CA264_20535 at 4731.082 kb on - strand, within CA264_20535 at 4731.094 kb on - strand, within CA264_20535 at 4731.131 kb on + strand, within CA264_20535 at 4731.133 kb on + strand, within CA264_20535 at 4731.133 kb on + strand, within CA264_20535 at 4731.134 kb on - strand, within CA264_20535 at 4731.157 kb on + strand, within CA264_20535 at 4731.276 kb on + strand at 4731.278 kb on + strand at 4731.339 kb on - strand at 4731.339 kb on - strand at 4731.394 kb on + strand at 4731.542 kb on - strand at 4731.559 kb on + strand at 4731.559 kb on + strand at 4731.559 kb on + strand at 4731.560 kb on - strand at 4731.571 kb on + strand at 4731.572 kb on - strand at 4731.708 kb on + strand, within CA264_20540 at 4731.708 kb on + strand, within CA264_20540 at 4731.709 kb on - strand, within CA264_20540 at 4731.736 kb on - strand, within CA264_20540 at 4731.753 kb on - strand, within CA264_20540 at 4731.806 kb on - strand, within CA264_20540 at 4731.847 kb on - strand, within CA264_20540 at 4731.847 kb on - strand, within CA264_20540 at 4731.872 kb on - strand, within CA264_20540 at 4731.924 kb on + strand, within CA264_20540 at 4732.009 kb on + strand, within CA264_20540 at 4732.010 kb on - strand, within CA264_20540 at 4732.094 kb on + strand, within CA264_20540 at 4732.095 kb on - strand, within CA264_20540 at 4732.144 kb on + strand, within CA264_20540 at 4732.147 kb on + strand, within CA264_20540 at 4732.148 kb on - strand, within CA264_20540 at 4732.162 kb on - strand, within CA264_20540 at 4732.212 kb on - strand, within CA264_20540 at 4732.216 kb on + strand, within CA264_20540 at 4732.217 kb on - strand, within CA264_20540 at 4732.217 kb on - strand, within CA264_20540 at 4732.222 kb on + strand, within CA264_20540 at 4732.222 kb on + strand, within CA264_20540
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 4,729,762 - -1.2 4,729,845 + -1.0 4,729,914 + CA264_20530 0.13 +0.2 4,729,915 - CA264_20530 0.13 -1.1 4,729,977 - CA264_20530 0.20 -0.6 4,730,005 + CA264_20530 0.23 -0.8 4,730,061 + CA264_20530 0.29 -0.2 4,730,061 + CA264_20530 0.29 -0.6 4,730,269 - CA264_20530 0.53 -0.2 4,730,269 - CA264_20530 0.53 -1.7 4,730,270 + CA264_20530 0.53 -1.9 4,730,306 - CA264_20530 0.57 -1.2 4,730,311 + CA264_20530 0.58 -1.1 4,730,346 - CA264_20530 0.61 -0.8 4,730,488 + CA264_20530 0.77 -2.7 4,730,715 + -1.0 4,730,716 - -1.3 4,730,729 + -1.1 4,730,730 - -2.4 4,730,790 - CA264_20535 0.11 +0.6 4,731,082 - CA264_20535 0.69 -0.6 4,731,094 - CA264_20535 0.71 -0.8 4,731,131 + CA264_20535 0.78 -0.9 4,731,133 + CA264_20535 0.79 -0.9 4,731,133 + CA264_20535 0.79 -1.4 4,731,134 - CA264_20535 0.79 -0.9 4,731,157 + CA264_20535 0.84 -1.4 4,731,276 + -0.1 4,731,278 + -0.1 4,731,339 - +0.5 4,731,339 - -2.4 4,731,394 + -0.6 4,731,542 - -0.5 4,731,559 + +0.9 4,731,559 + +1.1 4,731,559 + +0.2 4,731,560 - -1.5 4,731,571 + -0.7 4,731,572 - -1.4 4,731,708 + CA264_20540 0.12 -0.1 4,731,708 + CA264_20540 0.12 +0.8 4,731,709 - CA264_20540 0.12 +0.2 4,731,736 - CA264_20540 0.13 -0.5 4,731,753 - CA264_20540 0.14 -1.1 4,731,806 - CA264_20540 0.16 -0.9 4,731,847 - CA264_20540 0.18 -1.3 4,731,847 - CA264_20540 0.18 -2.4 4,731,872 - CA264_20540 0.19 -0.6 4,731,924 + CA264_20540 0.21 +1.3 4,732,009 + CA264_20540 0.25 -1.2 4,732,010 - CA264_20540 0.25 -1.6 4,732,094 + CA264_20540 0.28 -0.5 4,732,095 - CA264_20540 0.28 +0.3 4,732,144 + CA264_20540 0.31 +0.8 4,732,147 + CA264_20540 0.31 -1.1 4,732,148 - CA264_20540 0.31 -0.8 4,732,162 - CA264_20540 0.31 -1.1 4,732,212 - CA264_20540 0.33 -1.0 4,732,216 + CA264_20540 0.34 -1.0 4,732,217 - CA264_20540 0.34 -1.0 4,732,217 - CA264_20540 0.34 -0.2 4,732,222 + CA264_20540 0.34 -0.1 4,732,222 + CA264_20540 0.34 -0.1
Or see this region's nucleotide sequence