Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20115 and CA264_20120 are separated by 75 nucleotides CA264_20120 and CA264_20125 are separated by 447 nucleotides CA264_20125 and CA264_20130 are separated by 111 nucleotides
CA264_20115: CA264_20115 - phosphoribosylamine--glycine ligase, at 4,638,404 to 4,639,693
_20115
CA264_20120: CA264_20120 - hypothetical protein, at 4,639,769 to 4,640,182
_20120
CA264_20125: CA264_20125 - hypothetical protein, at 4,640,630 to 4,640,971
_20125
CA264_20130: CA264_20130 - hypothetical protein, at 4,641,083 to 4,641,619
_20130
Position (kb)
4640
4641 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4639.631 kb on - strand at 4639.692 kb on - strand at 4639.709 kb on - strand at 4639.770 kb on + strand at 4639.770 kb on + strand at 4639.776 kb on + strand at 4639.962 kb on - strand, within CA264_20120 at 4640.070 kb on - strand, within CA264_20120 at 4640.088 kb on - strand, within CA264_20120 at 4640.141 kb on - strand at 4640.167 kb on + strand at 4640.170 kb on - strand at 4640.178 kb on + strand at 4640.300 kb on + strand at 4640.300 kb on + strand at 4640.349 kb on - strand at 4640.380 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.385 kb on + strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.386 kb on - strand at 4640.388 kb on + strand at 4640.388 kb on + strand at 4640.503 kb on + strand at 4640.504 kb on - strand at 4640.542 kb on + strand at 4640.543 kb on - strand at 4640.577 kb on + strand at 4640.578 kb on - strand at 4640.578 kb on - strand at 4640.578 kb on - strand at 4640.601 kb on - strand at 4640.616 kb on - strand at 4640.629 kb on + strand at 4640.649 kb on - strand at 4640.653 kb on + strand at 4640.653 kb on + strand at 4640.654 kb on - strand at 4640.682 kb on + strand, within CA264_20125 at 4640.693 kb on - strand, within CA264_20125 at 4640.856 kb on - strand, within CA264_20125 at 4640.884 kb on + strand, within CA264_20125 at 4640.884 kb on + strand, within CA264_20125 at 4640.885 kb on - strand, within CA264_20125 at 4640.888 kb on - strand, within CA264_20125 at 4640.969 kb on + strand at 4640.970 kb on - strand at 4640.986 kb on + strand at 4641.002 kb on + strand at 4641.002 kb on + strand at 4641.012 kb on + strand at 4641.013 kb on - strand at 4641.068 kb on - strand at 4641.138 kb on - strand, within CA264_20130 at 4641.174 kb on - strand, within CA264_20130 at 4641.182 kb on + strand, within CA264_20130 at 4641.256 kb on + strand, within CA264_20130 at 4641.269 kb on + strand, within CA264_20130 at 4641.269 kb on + strand, within CA264_20130 at 4641.280 kb on - strand, within CA264_20130 at 4641.323 kb on + strand, within CA264_20130 at 4641.324 kb on - strand, within CA264_20130 at 4641.324 kb on - strand, within CA264_20130 at 4641.325 kb on + strand, within CA264_20130 at 4641.325 kb on + strand, within CA264_20130 at 4641.329 kb on + strand, within CA264_20130 at 4641.380 kb on + strand, within CA264_20130 at 4641.396 kb on + strand, within CA264_20130 at 4641.449 kb on + strand, within CA264_20130 at 4641.449 kb on + strand, within CA264_20130 at 4641.449 kb on + strand, within CA264_20130 at 4641.450 kb on - strand, within CA264_20130 at 4641.450 kb on - strand, within CA264_20130 at 4641.450 kb on - strand, within CA264_20130 at 4641.527 kb on - strand, within CA264_20130 at 4641.537 kb on + strand, within CA264_20130 at 4641.693 kb on + strand at 4641.761 kb on + strand at 4641.762 kb on - strand at 4641.855 kb on + strand at 4641.856 kb on - strand at 4641.856 kb on - strand at 4641.859 kb on + strand at 4641.860 kb on - strand at 4641.860 kb on - strand at 4641.860 kb on - strand at 4641.860 kb on - strand at 4641.870 kb on - strand at 4641.884 kb on - strand at 4641.919 kb on - strand at 4641.946 kb on + strand at 4641.946 kb on + strand at 4641.947 kb on - strand at 4641.947 kb on - strand at 4641.947 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 4,639,631 - -0.5 4,639,692 - -1.2 4,639,709 - -0.1 4,639,770 + -1.0 4,639,770 + -0.7 4,639,776 + -0.9 4,639,962 - CA264_20120 0.47 +0.2 4,640,070 - CA264_20120 0.73 +0.4 4,640,088 - CA264_20120 0.77 -0.8 4,640,141 - -1.0 4,640,167 + -2.5 4,640,170 - +0.0 4,640,178 + -1.1 4,640,300 + -0.8 4,640,300 + -1.1 4,640,349 - -0.5 4,640,380 + -1.3 4,640,385 + -1.4 4,640,385 + -1.5 4,640,385 + -1.2 4,640,385 + -1.4 4,640,385 + -1.3 4,640,385 + -0.2 4,640,385 + -1.6 4,640,385 + -2.4 4,640,385 + -0.5 4,640,385 + -0.4 4,640,385 + -1.8 4,640,385 + -1.0 4,640,385 + -3.1 4,640,385 + -1.0 4,640,385 + -2.6 4,640,385 + -1.8 4,640,385 + -0.3 4,640,385 + -0.6 4,640,385 + -2.5 4,640,385 + -1.9 4,640,385 + -1.7 4,640,385 + -0.2 4,640,386 - -2.0 4,640,386 - -1.3 4,640,386 - -0.7 4,640,386 - -2.3 4,640,386 - +0.3 4,640,386 - -0.5 4,640,386 - -1.0 4,640,386 - -2.4 4,640,386 - +0.3 4,640,386 - -0.7 4,640,386 - -0.8 4,640,386 - -1.5 4,640,386 - -2.4 4,640,386 - +1.8 4,640,386 - -0.9 4,640,386 - -1.2 4,640,386 - -0.2 4,640,386 - -1.3 4,640,388 + -1.3 4,640,388 + +1.2 4,640,503 + -1.3 4,640,504 - -1.4 4,640,542 + -1.1 4,640,543 - +0.5 4,640,577 + -2.1 4,640,578 - -1.4 4,640,578 - -2.1 4,640,578 - -0.0 4,640,601 - -0.8 4,640,616 - -1.6 4,640,629 + -0.7 4,640,649 - +1.1 4,640,653 + -1.1 4,640,653 + +0.0 4,640,654 - -0.7 4,640,682 + CA264_20125 0.15 +0.7 4,640,693 - CA264_20125 0.18 +0.0 4,640,856 - CA264_20125 0.66 -0.3 4,640,884 + CA264_20125 0.74 -1.0 4,640,884 + CA264_20125 0.74 -0.1 4,640,885 - CA264_20125 0.75 +0.2 4,640,888 - CA264_20125 0.75 -0.2 4,640,969 + -1.1 4,640,970 - -0.3 4,640,986 + -0.1 4,641,002 + -0.0 4,641,002 + -1.0 4,641,012 + -0.6 4,641,013 - +0.3 4,641,068 - +0.1 4,641,138 - CA264_20130 0.10 -0.6 4,641,174 - CA264_20130 0.17 -0.2 4,641,182 + CA264_20130 0.18 -0.8 4,641,256 + CA264_20130 0.32 -1.7 4,641,269 + CA264_20130 0.35 -0.8 4,641,269 + CA264_20130 0.35 +0.6 4,641,280 - CA264_20130 0.37 -0.3 4,641,323 + CA264_20130 0.45 -0.6 4,641,324 - CA264_20130 0.45 -0.5 4,641,324 - CA264_20130 0.45 -0.2 4,641,325 + CA264_20130 0.45 +0.9 4,641,325 + CA264_20130 0.45 +0.1 4,641,329 + CA264_20130 0.46 -0.4 4,641,380 + CA264_20130 0.55 -0.7 4,641,396 + CA264_20130 0.58 -0.2 4,641,449 + CA264_20130 0.68 -0.5 4,641,449 + CA264_20130 0.68 -0.4 4,641,449 + CA264_20130 0.68 -0.6 4,641,450 - CA264_20130 0.68 -1.2 4,641,450 - CA264_20130 0.68 -0.8 4,641,450 - CA264_20130 0.68 -0.3 4,641,527 - CA264_20130 0.83 -0.6 4,641,537 + CA264_20130 0.85 -2.0 4,641,693 + -1.0 4,641,761 + -0.5 4,641,762 - -0.3 4,641,855 + -0.8 4,641,856 - +0.7 4,641,856 - -0.6 4,641,859 + -0.5 4,641,860 - -0.4 4,641,860 - -0.2 4,641,860 - -1.0 4,641,860 - -0.2 4,641,870 - -0.8 4,641,884 - +0.2 4,641,919 - +0.1 4,641,946 + +0.5 4,641,946 + -1.1 4,641,947 - -1.1 4,641,947 - -0.4 4,641,947 - -0.9
Or see this region's nucleotide sequence