Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19810 and CA264_19815 are separated by 1 nucleotides CA264_19815 and CA264_19820 are separated by 193 nucleotides
CA264_19810: CA264_19810 - epoxyqueuosine reductase, at 4,572,478 to 4,573,419
_19810
CA264_19815: CA264_19815 - hypothetical protein, at 4,573,421 to 4,573,621
_19815
CA264_19820: CA264_19820 - dessication-associated protein, at 4,573,815 to 4,574,618
_19820
Position (kb)
4573
4574 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 4572.754 kb on + strand, within CA264_19810 at 4572.807 kb on + strand, within CA264_19810 at 4572.845 kb on + strand, within CA264_19810 at 4572.854 kb on + strand, within CA264_19810 at 4572.854 kb on + strand, within CA264_19810 at 4572.974 kb on - strand, within CA264_19810 at 4572.974 kb on - strand, within CA264_19810 at 4572.995 kb on + strand, within CA264_19810 at 4572.996 kb on - strand, within CA264_19810 at 4573.026 kb on - strand, within CA264_19810 at 4573.100 kb on + strand, within CA264_19810 at 4573.417 kb on + strand at 4573.417 kb on + strand at 4573.418 kb on - strand at 4573.430 kb on + strand at 4573.430 kb on + strand at 4573.431 kb on - strand at 4573.431 kb on - strand at 4573.495 kb on - strand, within CA264_19815 at 4573.495 kb on - strand, within CA264_19815 at 4573.518 kb on - strand, within CA264_19815 at 4573.518 kb on - strand, within CA264_19815 at 4573.541 kb on - strand, within CA264_19815 at 4573.611 kb on + strand at 4573.630 kb on + strand at 4573.630 kb on + strand at 4573.631 kb on - strand at 4573.631 kb on - strand at 4573.631 kb on - strand at 4573.638 kb on - strand at 4573.638 kb on - strand at 4573.668 kb on - strand at 4573.711 kb on - strand at 4573.777 kb on - strand at 4574.094 kb on + strand, within CA264_19820 at 4574.134 kb on + strand, within CA264_19820 at 4574.237 kb on + strand, within CA264_19820 at 4574.238 kb on - strand, within CA264_19820 at 4574.270 kb on + strand, within CA264_19820 at 4574.387 kb on + strand, within CA264_19820 at 4574.387 kb on + strand, within CA264_19820 at 4574.387 kb on + strand, within CA264_19820 at 4574.387 kb on + strand, within CA264_19820 at 4574.389 kb on + strand, within CA264_19820 at 4574.466 kb on - strand, within CA264_19820 at 4574.466 kb on - strand, within CA264_19820 at 4574.505 kb on + strand, within CA264_19820 at 4574.568 kb on + strand at 4574.569 kb on - strand at 4574.581 kb on - strand at 4574.611 kb on - strand at 4574.612 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 4,572,754 + CA264_19810 0.29 -2.1 4,572,807 + CA264_19810 0.35 -1.9 4,572,845 + CA264_19810 0.39 -1.4 4,572,854 + CA264_19810 0.40 -2.6 4,572,854 + CA264_19810 0.40 -3.2 4,572,974 - CA264_19810 0.53 -2.2 4,572,974 - CA264_19810 0.53 -4.7 4,572,995 + CA264_19810 0.55 -0.4 4,572,996 - CA264_19810 0.55 +0.6 4,573,026 - CA264_19810 0.58 -1.0 4,573,100 + CA264_19810 0.66 -0.5 4,573,417 + +0.9 4,573,417 + -0.8 4,573,418 - -4.0 4,573,430 + -0.6 4,573,430 + -0.3 4,573,431 - -4.0 4,573,431 - -2.8 4,573,495 - CA264_19815 0.37 -1.9 4,573,495 - CA264_19815 0.37 -2.1 4,573,518 - CA264_19815 0.48 -1.9 4,573,518 - CA264_19815 0.48 -2.2 4,573,541 - CA264_19815 0.60 -2.8 4,573,611 + -0.7 4,573,630 + -1.9 4,573,630 + -0.6 4,573,631 - -2.6 4,573,631 - -1.4 4,573,631 - -0.9 4,573,638 - -2.2 4,573,638 - -0.9 4,573,668 - -1.1 4,573,711 - -1.9 4,573,777 - -1.9 4,574,094 + CA264_19820 0.35 -0.4 4,574,134 + CA264_19820 0.40 -0.7 4,574,237 + CA264_19820 0.52 -0.4 4,574,238 - CA264_19820 0.53 -0.6 4,574,270 + CA264_19820 0.57 -1.1 4,574,387 + CA264_19820 0.71 -0.8 4,574,387 + CA264_19820 0.71 -1.1 4,574,387 + CA264_19820 0.71 -0.6 4,574,387 + CA264_19820 0.71 +0.3 4,574,389 + CA264_19820 0.71 -1.6 4,574,466 - CA264_19820 0.81 -0.6 4,574,466 - CA264_19820 0.81 -0.9 4,574,505 + CA264_19820 0.86 -0.3 4,574,568 + -0.5 4,574,569 - +0.0 4,574,581 - -1.0 4,574,611 - -1.0 4,574,612 + -0.9
Or see this region's nucleotide sequence