Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19605 and CA264_19610 are separated by 36 nucleotides CA264_19610 and CA264_19615 are separated by 193 nucleotides
CA264_19605: CA264_19605 - RNA polymerase, at 4,530,161 to 4,530,718
_19605
CA264_19610: CA264_19610 - hypothetical protein, at 4,530,755 to 4,531,387
_19610
CA264_19615: CA264_19615 - hypothetical protein, at 4,531,581 to 4,532,540
_19615
Position (kb)
4530
4531
4532 Strain fitness (log2 ratio)
-2
-1
0
1 at 4529.834 kb on + strand at 4530.002 kb on - strand at 4530.051 kb on + strand at 4530.082 kb on + strand at 4530.154 kb on + strand at 4530.186 kb on + strand at 4530.187 kb on - strand at 4530.245 kb on + strand, within CA264_19605 at 4530.246 kb on - strand, within CA264_19605 at 4530.254 kb on + strand, within CA264_19605 at 4530.254 kb on + strand, within CA264_19605 at 4530.254 kb on + strand, within CA264_19605 at 4530.265 kb on + strand, within CA264_19605 at 4530.266 kb on - strand, within CA264_19605 at 4530.299 kb on + strand, within CA264_19605 at 4530.362 kb on + strand, within CA264_19605 at 4530.363 kb on - strand, within CA264_19605 at 4530.363 kb on - strand, within CA264_19605 at 4530.419 kb on - strand, within CA264_19605 at 4530.522 kb on + strand, within CA264_19605 at 4530.522 kb on + strand, within CA264_19605 at 4530.544 kb on - strand, within CA264_19605 at 4530.584 kb on + strand, within CA264_19605 at 4530.584 kb on + strand, within CA264_19605 at 4530.729 kb on + strand at 4530.736 kb on + strand at 4530.745 kb on + strand at 4530.745 kb on + strand at 4530.748 kb on + strand at 4530.748 kb on + strand at 4530.748 kb on + strand at 4530.748 kb on + strand at 4530.748 kb on + strand at 4530.749 kb on - strand at 4530.859 kb on + strand, within CA264_19610 at 4531.336 kb on - strand at 4531.348 kb on + strand at 4531.349 kb on - strand at 4531.349 kb on - strand at 4531.352 kb on - strand at 4531.360 kb on + strand at 4531.360 kb on + strand at 4531.591 kb on + strand at 4531.591 kb on + strand at 4531.831 kb on + strand, within CA264_19615 at 4531.944 kb on + strand, within CA264_19615 at 4531.954 kb on - strand, within CA264_19615 at 4532.005 kb on - strand, within CA264_19615 at 4532.124 kb on + strand, within CA264_19615 at 4532.259 kb on + strand, within CA264_19615 at 4532.374 kb on + strand, within CA264_19615
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 4,529,834 + -0.3 4,530,002 - +0.5 4,530,051 + -0.5 4,530,082 + +0.1 4,530,154 + -1.2 4,530,186 + -1.2 4,530,187 - -0.3 4,530,245 + CA264_19605 0.15 -0.4 4,530,246 - CA264_19605 0.15 -0.2 4,530,254 + CA264_19605 0.17 -0.3 4,530,254 + CA264_19605 0.17 -0.8 4,530,254 + CA264_19605 0.17 -0.6 4,530,265 + CA264_19605 0.19 -0.3 4,530,266 - CA264_19605 0.19 -0.5 4,530,299 + CA264_19605 0.25 -1.3 4,530,362 + CA264_19605 0.36 -0.8 4,530,363 - CA264_19605 0.36 -0.7 4,530,363 - CA264_19605 0.36 -0.3 4,530,419 - CA264_19605 0.46 -0.6 4,530,522 + CA264_19605 0.65 -0.6 4,530,522 + CA264_19605 0.65 -2.5 4,530,544 - CA264_19605 0.69 -1.3 4,530,584 + CA264_19605 0.76 -0.8 4,530,584 + CA264_19605 0.76 -0.2 4,530,729 + -2.4 4,530,736 + +0.2 4,530,745 + -1.7 4,530,745 + +0.4 4,530,748 + -0.5 4,530,748 + -0.6 4,530,748 + -0.9 4,530,748 + -1.3 4,530,748 + -0.9 4,530,749 - +0.8 4,530,859 + CA264_19610 0.16 -1.5 4,531,336 - -1.0 4,531,348 + +0.0 4,531,349 - -1.2 4,531,349 - -1.5 4,531,352 - -1.6 4,531,360 + -0.7 4,531,360 + -0.9 4,531,591 + +0.2 4,531,591 + -2.2 4,531,831 + CA264_19615 0.26 -1.2 4,531,944 + CA264_19615 0.38 -0.0 4,531,954 - CA264_19615 0.39 -0.0 4,532,005 - CA264_19615 0.44 -1.2 4,532,124 + CA264_19615 0.57 -0.2 4,532,259 + CA264_19615 0.71 -0.7 4,532,374 + CA264_19615 0.83 +0.7
Or see this region's nucleotide sequence