Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19085 and CA264_19090 overlap by 17 nucleotides CA264_19090 and CA264_19095 are separated by 274 nucleotides
CA264_19085: CA264_19085 - RNA polymerase subunit sigma-24, at 4,434,682 to 4,435,260
_19085
CA264_19090: CA264_19090 - hypothetical protein, at 4,435,244 to 4,436,938
_19090
CA264_19095: CA264_19095 - hypothetical protein, at 4,437,213 to 4,437,584
_19095
Position (kb)
4435
4436
4437 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4434.290 kb on + strand at 4434.291 kb on - strand at 4434.293 kb on + strand at 4434.407 kb on - strand at 4434.438 kb on - strand at 4434.493 kb on + strand at 4434.605 kb on - strand at 4434.605 kb on - strand at 4434.615 kb on + strand at 4434.651 kb on + strand at 4434.726 kb on - strand at 4434.769 kb on + strand, within CA264_19085 at 4434.769 kb on + strand, within CA264_19085 at 4434.840 kb on + strand, within CA264_19085 at 4434.944 kb on + strand, within CA264_19085 at 4435.009 kb on - strand, within CA264_19085 at 4435.056 kb on - strand, within CA264_19085 at 4435.059 kb on + strand, within CA264_19085 at 4435.106 kb on - strand, within CA264_19085 at 4435.180 kb on + strand, within CA264_19085 at 4435.199 kb on + strand, within CA264_19085 at 4435.200 kb on - strand, within CA264_19085 at 4435.360 kb on + strand at 4435.361 kb on - strand at 4435.382 kb on + strand at 4435.383 kb on - strand at 4435.403 kb on + strand at 4435.464 kb on - strand, within CA264_19090 at 4435.467 kb on - strand, within CA264_19090 at 4435.720 kb on + strand, within CA264_19090 at 4435.720 kb on + strand, within CA264_19090 at 4436.495 kb on - strand, within CA264_19090 at 4436.589 kb on - strand, within CA264_19090 at 4436.913 kb on - strand at 4437.048 kb on + strand at 4437.061 kb on - strand at 4437.086 kb on + strand at 4437.087 kb on - strand at 4437.118 kb on - strand at 4437.122 kb on + strand at 4437.122 kb on + strand at 4437.122 kb on + strand at 4437.122 kb on + strand at 4437.123 kb on - strand at 4437.123 kb on - strand at 4437.136 kb on + strand at 4437.137 kb on - strand at 4437.160 kb on + strand at 4437.161 kb on - strand at 4437.228 kb on + strand at 4437.345 kb on + strand, within CA264_19095 at 4437.346 kb on - strand, within CA264_19095 at 4437.424 kb on - strand, within CA264_19095 at 4437.438 kb on - strand, within CA264_19095 at 4437.475 kb on + strand, within CA264_19095 at 4437.493 kb on + strand, within CA264_19095 at 4437.493 kb on + strand, within CA264_19095 at 4437.582 kb on + strand at 4437.600 kb on + strand at 4437.601 kb on - strand at 4437.608 kb on - strand at 4437.617 kb on - strand at 4437.617 kb on - strand at 4437.635 kb on - strand at 4437.672 kb on + strand at 4437.760 kb on - strand at 4437.770 kb on + strand at 4437.771 kb on - strand at 4437.793 kb on - strand at 4437.815 kb on - strand at 4437.821 kb on - strand at 4437.821 kb on - strand at 4437.837 kb on - strand at 4437.850 kb on + strand at 4437.852 kb on + strand at 4437.856 kb on + strand at 4437.858 kb on + strand at 4437.911 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 4,434,290 + -0.6 4,434,291 - -1.8 4,434,293 + -1.2 4,434,407 - -0.7 4,434,438 - -0.6 4,434,493 + -0.7 4,434,605 - -0.9 4,434,605 - -0.7 4,434,615 + -1.0 4,434,651 + +0.9 4,434,726 - +0.1 4,434,769 + CA264_19085 0.15 -0.5 4,434,769 + CA264_19085 0.15 -0.5 4,434,840 + CA264_19085 0.27 -0.7 4,434,944 + CA264_19085 0.45 -0.9 4,435,009 - CA264_19085 0.56 -0.8 4,435,056 - CA264_19085 0.65 -0.3 4,435,059 + CA264_19085 0.65 -0.2 4,435,106 - CA264_19085 0.73 -0.7 4,435,180 + CA264_19085 0.86 -0.3 4,435,199 + CA264_19085 0.89 +0.4 4,435,200 - CA264_19085 0.89 -0.6 4,435,360 + -0.3 4,435,361 - -1.2 4,435,382 + -0.4 4,435,383 - -0.3 4,435,403 + -1.2 4,435,464 - CA264_19090 0.13 -1.4 4,435,467 - CA264_19090 0.13 -1.7 4,435,720 + CA264_19090 0.28 -0.4 4,435,720 + CA264_19090 0.28 +0.5 4,436,495 - CA264_19090 0.74 -1.2 4,436,589 - CA264_19090 0.79 -0.3 4,436,913 - -0.1 4,437,048 + -1.5 4,437,061 - -0.6 4,437,086 + -0.0 4,437,087 - -0.1 4,437,118 - -1.5 4,437,122 + +0.0 4,437,122 + +1.1 4,437,122 + -0.1 4,437,122 + -0.2 4,437,123 - -0.5 4,437,123 - -0.7 4,437,136 + -0.9 4,437,137 - -1.7 4,437,160 + +0.2 4,437,161 - -0.5 4,437,228 + -0.4 4,437,345 + CA264_19095 0.35 -0.1 4,437,346 - CA264_19095 0.36 -0.3 4,437,424 - CA264_19095 0.57 -1.0 4,437,438 - CA264_19095 0.60 +0.4 4,437,475 + CA264_19095 0.70 -1.5 4,437,493 + CA264_19095 0.75 -0.8 4,437,493 + CA264_19095 0.75 -0.5 4,437,582 + -1.0 4,437,600 + -0.9 4,437,601 - -0.5 4,437,608 - -0.9 4,437,617 - -1.4 4,437,617 - -2.3 4,437,635 - -0.9 4,437,672 + +0.4 4,437,760 - -3.3 4,437,770 + -1.0 4,437,771 - -0.2 4,437,793 - +0.3 4,437,815 - -0.6 4,437,821 - -0.2 4,437,821 - -0.8 4,437,837 - -0.9 4,437,850 + -1.2 4,437,852 + -0.6 4,437,856 + -3.3 4,437,858 + +0.4 4,437,911 - -0.3
Or see this region's nucleotide sequence