Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18240 and CA264_18245 are separated by 530 nucleotides CA264_18245 and CA264_18250 are separated by 47 nucleotides CA264_18250 and CA264_18255 are separated by 56 nucleotides
CA264_18240: CA264_18240 - hypothetical protein, at 4,241,059 to 4,242,474
_18240
CA264_18245: CA264_18245 - NADH-quinone oxidoreductase subunit A, at 4,243,005 to 4,243,514
_18245
CA264_18250: CA264_18250 - NADH-quinone oxidoreductase subunit B, at 4,243,562 to 4,244,104
_18250
CA264_18255: CA264_18255 - hypothetical protein, at 4,244,161 to 4,247,547
_18255
Position (kb)
4243
4244 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4242.041 kb on - strand, within CA264_18240 at 4242.051 kb on + strand, within CA264_18240 at 4242.052 kb on - strand, within CA264_18240 at 4242.052 kb on - strand, within CA264_18240 at 4242.053 kb on + strand, within CA264_18240 at 4242.054 kb on - strand, within CA264_18240 at 4242.071 kb on + strand, within CA264_18240 at 4242.119 kb on - strand, within CA264_18240 at 4242.125 kb on - strand, within CA264_18240 at 4242.381 kb on + strand at 4242.382 kb on - strand at 4242.382 kb on - strand at 4242.431 kb on + strand at 4242.431 kb on + strand at 4242.431 kb on + strand at 4242.475 kb on - strand at 4242.511 kb on - strand at 4242.511 kb on - strand at 4242.511 kb on - strand at 4242.579 kb on + strand at 4242.598 kb on + strand at 4242.598 kb on + strand at 4242.599 kb on - strand at 4242.658 kb on - strand at 4242.658 kb on - strand at 4242.672 kb on + strand at 4242.695 kb on - strand at 4242.751 kb on + strand at 4242.752 kb on - strand at 4242.754 kb on - strand at 4242.754 kb on - strand at 4242.863 kb on - strand at 4242.865 kb on + strand at 4242.907 kb on + strand at 4242.928 kb on + strand at 4242.962 kb on - strand at 4243.002 kb on - strand at 4243.037 kb on + strand at 4243.334 kb on + strand, within CA264_18245 at 4243.452 kb on + strand, within CA264_18245 at 4243.512 kb on + strand at 4243.591 kb on - strand at 4243.616 kb on - strand at 4243.672 kb on + strand, within CA264_18250 at 4244.115 kb on + strand at 4244.122 kb on + strand at 4244.225 kb on + strand at 4244.226 kb on - strand at 4244.227 kb on + strand at 4244.232 kb on + strand at 4244.309 kb on + strand at 4244.461 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 4,242,041 - CA264_18240 0.69 -0.9 4,242,051 + CA264_18240 0.70 -0.4 4,242,052 - CA264_18240 0.70 -0.4 4,242,052 - CA264_18240 0.70 +0.9 4,242,053 + CA264_18240 0.70 -0.8 4,242,054 - CA264_18240 0.70 -0.3 4,242,071 + CA264_18240 0.71 -0.3 4,242,119 - CA264_18240 0.75 -0.8 4,242,125 - CA264_18240 0.75 -0.2 4,242,381 + -1.8 4,242,382 - -0.9 4,242,382 - -0.4 4,242,431 + -0.4 4,242,431 + -0.4 4,242,431 + -0.6 4,242,475 - -0.6 4,242,511 - +0.6 4,242,511 - -0.4 4,242,511 - +0.1 4,242,579 + -0.0 4,242,598 + -0.9 4,242,598 + -0.8 4,242,599 - -0.1 4,242,658 - -0.4 4,242,658 - -0.8 4,242,672 + -0.5 4,242,695 - -0.4 4,242,751 + -0.1 4,242,752 - -3.4 4,242,754 - -0.2 4,242,754 - +0.3 4,242,863 - -0.2 4,242,865 + +1.5 4,242,907 + +0.7 4,242,928 + +0.8 4,242,962 - -0.4 4,243,002 - -0.3 4,243,037 + +1.1 4,243,334 + CA264_18245 0.65 -0.8 4,243,452 + CA264_18245 0.88 -1.1 4,243,512 + -2.0 4,243,591 - +0.2 4,243,616 - -0.7 4,243,672 + CA264_18250 0.20 -0.2 4,244,115 + -0.3 4,244,122 + +0.1 4,244,225 + +0.7 4,244,226 - -0.8 4,244,227 + -0.4 4,244,232 + -0.2 4,244,309 + -0.4 4,244,461 - +1.0
Or see this region's nucleotide sequence