Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17625 and CA264_17630 overlap by 17 nucleotides CA264_17630 and CA264_17635 are separated by 9 nucleotides CA264_17635 and CA264_17640 are separated by 224 nucleotides
CA264_17625: CA264_17625 - TIGR00374 family protein, at 4,104,605 to 4,105,651
_17625
CA264_17630: CA264_17630 - D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase, at 4,105,635 to 4,106,132
_17630
CA264_17635: CA264_17635 - hypothetical protein, at 4,106,142 to 4,106,822
_17635
CA264_17640: CA264_17640 - acyl-CoA dehydrogenase, at 4,107,047 to 4,108,186
_17640
Position (kb) 4106
4107 Strain fitness (log2 ratio) -1
0
1 at 4106.119 kb on + strand at 4106.135 kb on + strand at 4106.136 kb on - strand at 4106.154 kb on + strand at 4106.155 kb on - strand at 4106.155 kb on - strand at 4106.159 kb on + strand at 4106.186 kb on + strand at 4106.226 kb on + strand, within CA264_17635 at 4106.308 kb on + strand, within CA264_17635 at 4106.308 kb on + strand, within CA264_17635 at 4106.308 kb on + strand, within CA264_17635 at 4106.309 kb on - strand, within CA264_17635 at 4106.314 kb on + strand, within CA264_17635 at 4106.314 kb on + strand, within CA264_17635 at 4106.315 kb on - strand, within CA264_17635 at 4106.346 kb on + strand, within CA264_17635 at 4106.383 kb on - strand, within CA264_17635 at 4106.388 kb on + strand, within CA264_17635 at 4106.463 kb on + strand, within CA264_17635 at 4106.463 kb on + strand, within CA264_17635 at 4106.557 kb on + strand, within CA264_17635 at 4106.606 kb on + strand, within CA264_17635 at 4106.748 kb on + strand, within CA264_17635 at 4106.748 kb on + strand, within CA264_17635 at 4106.748 kb on + strand, within CA264_17635 at 4106.787 kb on + strand at 4106.787 kb on + strand at 4106.787 kb on + strand at 4106.787 kb on + strand at 4106.787 kb on + strand at 4106.788 kb on - strand at 4106.790 kb on + strand at 4106.790 kb on + strand at 4106.794 kb on + strand at 4106.795 kb on - strand at 4106.820 kb on + strand at 4106.833 kb on - strand at 4106.927 kb on - strand at 4106.953 kb on + strand at 4107.040 kb on - strand at 4107.046 kb on + strand at 4107.046 kb on + strand at 4107.217 kb on + strand, within CA264_17640 at 4107.374 kb on + strand, within CA264_17640 at 4107.374 kb on + strand, within CA264_17640 at 4107.375 kb on - strand, within CA264_17640 at 4107.375 kb on - strand, within CA264_17640 at 4107.550 kb on - strand, within CA264_17640 at 4107.550 kb on - strand, within CA264_17640 at 4107.563 kb on + strand, within CA264_17640 at 4107.716 kb on - strand, within CA264_17640 at 4107.803 kb on - strand, within CA264_17640
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 4,106,119 + -0.1 4,106,135 + -0.6 4,106,136 - -1.4 4,106,154 + -0.7 4,106,155 - -0.7 4,106,155 - +0.3 4,106,159 + +0.3 4,106,186 + -0.4 4,106,226 + CA264_17635 0.12 -0.4 4,106,308 + CA264_17635 0.24 +0.7 4,106,308 + CA264_17635 0.24 -0.6 4,106,308 + CA264_17635 0.24 -0.3 4,106,309 - CA264_17635 0.25 -0.5 4,106,314 + CA264_17635 0.25 -0.2 4,106,314 + CA264_17635 0.25 +0.3 4,106,315 - CA264_17635 0.25 -1.6 4,106,346 + CA264_17635 0.30 -0.5 4,106,383 - CA264_17635 0.35 +1.6 4,106,388 + CA264_17635 0.36 +0.3 4,106,463 + CA264_17635 0.47 -0.2 4,106,463 + CA264_17635 0.47 -0.2 4,106,557 + CA264_17635 0.61 -0.1 4,106,606 + CA264_17635 0.68 -1.0 4,106,748 + CA264_17635 0.89 -0.8 4,106,748 + CA264_17635 0.89 -0.1 4,106,748 + CA264_17635 0.89 +1.0 4,106,787 + -0.7 4,106,787 + -0.4 4,106,787 + +0.0 4,106,787 + +1.1 4,106,787 + -0.1 4,106,788 - -0.7 4,106,790 + +0.4 4,106,790 + -0.4 4,106,794 + -0.4 4,106,795 - +0.4 4,106,820 + -0.5 4,106,833 - -0.8 4,106,927 - -0.1 4,106,953 + +0.4 4,107,040 - -0.3 4,107,046 + -0.9 4,107,046 + +0.2 4,107,217 + CA264_17640 0.15 +0.0 4,107,374 + CA264_17640 0.29 +0.4 4,107,374 + CA264_17640 0.29 +0.2 4,107,375 - CA264_17640 0.29 -0.4 4,107,375 - CA264_17640 0.29 +0.1 4,107,550 - CA264_17640 0.44 -0.9 4,107,550 - CA264_17640 0.44 +0.3 4,107,563 + CA264_17640 0.45 +0.2 4,107,716 - CA264_17640 0.59 +0.3 4,107,803 - CA264_17640 0.66 +0.3
Or see this region's nucleotide sequence