Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17495 and CA264_17500 are separated by 360 nucleotides CA264_17500 and CA264_17505 are separated by 12 nucleotides CA264_17505 and CA264_17510 are separated by 99 nucleotides
CA264_17495: CA264_17495 - hypothetical protein, at 4,076,265 to 4,076,855
_17495
CA264_17500: CA264_17500 - molecular chaperone DnaK, at 4,077,216 to 4,077,605
_17500
CA264_17505: CA264_17505 - SMC-Scp complex subunit ScpB, at 4,077,618 to 4,078,181
_17505
CA264_17510: CA264_17510 - pseudouridylate synthase, at 4,078,281 to 4,079,909
_17510
Position (kb)
4077
4078
4079 Strain fitness (log2 ratio)
-2
-1
0
1 at 4076.639 kb on + strand, within CA264_17495 at 4076.639 kb on + strand, within CA264_17495 at 4076.640 kb on - strand, within CA264_17495 at 4076.640 kb on - strand, within CA264_17495 at 4076.641 kb on + strand, within CA264_17495 at 4076.642 kb on - strand, within CA264_17495 at 4076.642 kb on - strand, within CA264_17495 at 4076.838 kb on + strand at 4076.855 kb on + strand at 4076.867 kb on - strand at 4076.873 kb on + strand at 4076.878 kb on - strand at 4076.917 kb on + strand at 4076.954 kb on - strand at 4076.961 kb on - strand at 4076.961 kb on - strand at 4076.989 kb on - strand at 4077.002 kb on - strand at 4077.067 kb on + strand at 4077.103 kb on - strand at 4077.107 kb on + strand at 4077.108 kb on - strand at 4077.112 kb on - strand at 4077.112 kb on - strand at 4077.112 kb on - strand at 4077.127 kb on + strand at 4077.188 kb on - strand at 4077.204 kb on + strand at 4077.204 kb on + strand at 4077.205 kb on - strand at 4077.208 kb on - strand at 4077.214 kb on + strand at 4077.215 kb on - strand at 4077.215 kb on - strand at 4077.215 kb on - strand at 4077.221 kb on + strand at 4077.314 kb on - strand, within CA264_17500 at 4077.502 kb on - strand, within CA264_17500 at 4077.517 kb on + strand, within CA264_17500 at 4077.596 kb on + strand at 4077.860 kb on - strand, within CA264_17505 at 4077.860 kb on - strand, within CA264_17505 at 4077.926 kb on + strand, within CA264_17505 at 4078.031 kb on - strand, within CA264_17505 at 4078.208 kb on - strand at 4078.209 kb on + strand at 4078.210 kb on - strand at 4078.230 kb on + strand at 4078.231 kb on - strand at 4078.272 kb on + strand at 4078.273 kb on - strand at 4078.273 kb on - strand at 4078.273 kb on - strand at 4078.273 kb on - strand at 4078.273 kb on - strand at 4078.276 kb on + strand at 4078.276 kb on + strand at 4078.277 kb on - strand at 4078.277 kb on - strand at 4078.277 kb on - strand at 4078.472 kb on + strand, within CA264_17510 at 4078.473 kb on - strand, within CA264_17510 at 4078.482 kb on - strand, within CA264_17510 at 4078.942 kb on - strand, within CA264_17510
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 4,076,639 + CA264_17495 0.63 -0.6 4,076,639 + CA264_17495 0.63 -1.4 4,076,640 - CA264_17495 0.63 -0.3 4,076,640 - CA264_17495 0.63 -0.8 4,076,641 + CA264_17495 0.64 -0.7 4,076,642 - CA264_17495 0.64 -0.1 4,076,642 - CA264_17495 0.64 -0.1 4,076,838 + -1.1 4,076,855 + -0.9 4,076,867 - -0.7 4,076,873 + -0.0 4,076,878 - -1.0 4,076,917 + -0.6 4,076,954 - -0.0 4,076,961 - +0.2 4,076,961 - -0.8 4,076,989 - -0.7 4,077,002 - -1.2 4,077,067 + -0.1 4,077,103 - +0.6 4,077,107 + -0.5 4,077,108 - -1.5 4,077,112 - -0.2 4,077,112 - -1.3 4,077,112 - -0.3 4,077,127 + -1.6 4,077,188 - -1.4 4,077,204 + -0.0 4,077,204 + -0.3 4,077,205 - -1.9 4,077,208 - -0.1 4,077,214 + -0.3 4,077,215 - -0.5 4,077,215 - +0.2 4,077,215 - -0.8 4,077,221 + +0.6 4,077,314 - CA264_17500 0.25 -1.2 4,077,502 - CA264_17500 0.73 -0.3 4,077,517 + CA264_17500 0.77 -1.0 4,077,596 + +0.8 4,077,860 - CA264_17505 0.43 -0.5 4,077,860 - CA264_17505 0.43 +0.3 4,077,926 + CA264_17505 0.55 -0.3 4,078,031 - CA264_17505 0.73 -0.5 4,078,208 - -0.7 4,078,209 + -0.2 4,078,210 - -0.6 4,078,230 + -0.9 4,078,231 - -0.0 4,078,272 + -0.3 4,078,273 - +0.0 4,078,273 - -0.8 4,078,273 - -0.0 4,078,273 - -0.1 4,078,273 - +0.5 4,078,276 + -0.7 4,078,276 + -0.5 4,078,277 - -0.8 4,078,277 - +0.0 4,078,277 - -1.1 4,078,472 + CA264_17510 0.12 -0.7 4,078,473 - CA264_17510 0.12 -0.6 4,078,482 - CA264_17510 0.12 -0.4 4,078,942 - CA264_17510 0.41 -0.2
Or see this region's nucleotide sequence