Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17405 and CA264_17410 are separated by 191 nucleotides CA264_17410 and CA264_17415 are separated by 390 nucleotides CA264_17415 and CA264_17420 are separated by 126 nucleotides
CA264_17405: CA264_17405 - N-formylglutamate amidohydrolase, at 4,059,064 to 4,059,870
_17405
CA264_17410: CA264_17410 - hypothetical protein, at 4,060,062 to 4,061,294
_17410
CA264_17415: CA264_17415 - hypothetical protein, at 4,061,685 to 4,061,885
_17415
CA264_17420: CA264_17420 - hypothetical protein, at 4,062,012 to 4,062,260
_17420
Position (kb)
4060
4061
4062 Strain fitness (log2 ratio)
-2
-1
0
1 at 4059.066 kb on - strand at 4059.066 kb on - strand at 4059.385 kb on + strand, within CA264_17405 at 4059.446 kb on + strand, within CA264_17405 at 4059.446 kb on + strand, within CA264_17405 at 4059.447 kb on - strand, within CA264_17405 at 4059.447 kb on - strand, within CA264_17405 at 4059.447 kb on - strand, within CA264_17405 at 4059.461 kb on + strand, within CA264_17405 at 4059.462 kb on - strand, within CA264_17405 at 4059.463 kb on + strand, within CA264_17405 at 4059.466 kb on + strand, within CA264_17405 at 4059.466 kb on + strand, within CA264_17405 at 4059.466 kb on + strand, within CA264_17405 at 4059.467 kb on - strand, within CA264_17405 at 4059.489 kb on + strand, within CA264_17405 at 4059.512 kb on - strand, within CA264_17405 at 4059.617 kb on + strand, within CA264_17405 at 4059.665 kb on + strand, within CA264_17405 at 4059.754 kb on - strand, within CA264_17405 at 4059.837 kb on + strand at 4059.838 kb on - strand at 4059.838 kb on - strand at 4059.839 kb on + strand at 4059.840 kb on - strand at 4059.842 kb on + strand at 4059.842 kb on + strand at 4059.842 kb on + strand at 4059.842 kb on + strand at 4059.843 kb on - strand at 4059.843 kb on - strand at 4059.843 kb on - strand at 4059.844 kb on + strand at 4059.844 kb on + strand at 4059.845 kb on - strand at 4059.845 kb on - strand at 4059.853 kb on + strand at 4059.853 kb on + strand at 4060.008 kb on + strand at 4060.034 kb on + strand at 4060.074 kb on + strand at 4060.074 kb on + strand at 4060.099 kb on + strand at 4060.162 kb on + strand at 4060.270 kb on + strand, within CA264_17410 at 4060.412 kb on + strand, within CA264_17410 at 4060.821 kb on + strand, within CA264_17410 at 4060.837 kb on - strand, within CA264_17410 at 4060.892 kb on - strand, within CA264_17410 at 4060.929 kb on + strand, within CA264_17410 at 4060.929 kb on + strand, within CA264_17410 at 4060.929 kb on + strand, within CA264_17410 at 4060.935 kb on + strand, within CA264_17410 at 4060.935 kb on + strand, within CA264_17410 at 4060.935 kb on + strand, within CA264_17410 at 4060.936 kb on - strand, within CA264_17410 at 4060.936 kb on - strand, within CA264_17410 at 4060.936 kb on - strand, within CA264_17410 at 4060.936 kb on - strand, within CA264_17410 at 4061.013 kb on + strand, within CA264_17410 at 4061.014 kb on - strand, within CA264_17410 at 4061.014 kb on - strand, within CA264_17410 at 4061.016 kb on - strand, within CA264_17410 at 4061.142 kb on + strand, within CA264_17410 at 4061.358 kb on + strand at 4061.359 kb on - strand at 4061.401 kb on - strand at 4061.434 kb on + strand at 4061.436 kb on + strand at 4061.436 kb on + strand at 4061.437 kb on - strand at 4061.440 kb on - strand at 4061.453 kb on - strand at 4061.527 kb on - strand at 4061.541 kb on + strand at 4061.542 kb on - strand at 4061.542 kb on - strand at 4061.622 kb on + strand at 4061.690 kb on + strand at 4061.711 kb on + strand, within CA264_17415 at 4061.740 kb on + strand, within CA264_17415 at 4061.805 kb on + strand, within CA264_17415 at 4061.816 kb on - strand, within CA264_17415 at 4061.852 kb on + strand, within CA264_17415 at 4061.852 kb on + strand, within CA264_17415 at 4061.853 kb on - strand, within CA264_17415 at 4061.892 kb on - strand at 4061.962 kb on + strand at 4061.962 kb on + strand at 4061.994 kb on + strand at 4062.130 kb on + strand, within CA264_17420 at 4062.131 kb on - strand, within CA264_17420 at 4062.167 kb on + strand, within CA264_17420 at 4062.175 kb on + strand, within CA264_17420 at 4062.193 kb on - strand, within CA264_17420 at 4062.193 kb on - strand, within CA264_17420 at 4062.193 kb on - strand, within CA264_17420 at 4062.225 kb on - strand, within CA264_17420 at 4062.246 kb on - strand at 4062.261 kb on + strand at 4062.261 kb on + strand at 4062.261 kb on + strand at 4062.262 kb on - strand at 4062.262 kb on - strand at 4062.280 kb on + strand at 4062.281 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 4,059,066 - +0.2 4,059,066 - +1.6 4,059,385 + CA264_17405 0.40 -0.9 4,059,446 + CA264_17405 0.47 -0.9 4,059,446 + CA264_17405 0.47 -0.3 4,059,447 - CA264_17405 0.47 -0.5 4,059,447 - CA264_17405 0.47 -0.8 4,059,447 - CA264_17405 0.47 -0.5 4,059,461 + CA264_17405 0.49 -0.4 4,059,462 - CA264_17405 0.49 +0.2 4,059,463 + CA264_17405 0.49 -0.6 4,059,466 + CA264_17405 0.50 -0.1 4,059,466 + CA264_17405 0.50 -0.5 4,059,466 + CA264_17405 0.50 -0.4 4,059,467 - CA264_17405 0.50 -0.1 4,059,489 + CA264_17405 0.53 -1.0 4,059,512 - CA264_17405 0.56 -1.0 4,059,617 + CA264_17405 0.69 +0.3 4,059,665 + CA264_17405 0.74 -0.6 4,059,754 - CA264_17405 0.86 -0.2 4,059,837 + -0.7 4,059,838 - -0.7 4,059,838 - -0.2 4,059,839 + -0.9 4,059,840 - -0.9 4,059,842 + -0.8 4,059,842 + -0.2 4,059,842 + -1.1 4,059,842 + -0.6 4,059,843 - -0.8 4,059,843 - -0.0 4,059,843 - -1.5 4,059,844 + -0.4 4,059,844 + -0.3 4,059,845 - +0.8 4,059,845 - -1.5 4,059,853 + +0.8 4,059,853 + -0.5 4,060,008 + -0.5 4,060,034 + -0.8 4,060,074 + -0.4 4,060,074 + -0.4 4,060,099 + +0.8 4,060,162 + -0.5 4,060,270 + CA264_17410 0.17 -0.8 4,060,412 + CA264_17410 0.28 -0.0 4,060,821 + CA264_17410 0.62 -1.3 4,060,837 - CA264_17410 0.63 -0.3 4,060,892 - CA264_17410 0.67 -0.0 4,060,929 + CA264_17410 0.70 -0.9 4,060,929 + CA264_17410 0.70 -0.5 4,060,929 + CA264_17410 0.70 -0.2 4,060,935 + CA264_17410 0.71 -0.0 4,060,935 + CA264_17410 0.71 +0.4 4,060,935 + CA264_17410 0.71 +0.4 4,060,936 - CA264_17410 0.71 -1.7 4,060,936 - CA264_17410 0.71 +0.1 4,060,936 - CA264_17410 0.71 -0.4 4,060,936 - CA264_17410 0.71 -1.1 4,061,013 + CA264_17410 0.77 +0.0 4,061,014 - CA264_17410 0.77 +0.0 4,061,014 - CA264_17410 0.77 -0.3 4,061,016 - CA264_17410 0.77 -1.1 4,061,142 + CA264_17410 0.88 -0.7 4,061,358 + -0.3 4,061,359 - -0.6 4,061,401 - -0.4 4,061,434 + +0.8 4,061,436 + -0.2 4,061,436 + -0.7 4,061,437 - -0.5 4,061,440 - +0.1 4,061,453 - -0.3 4,061,527 - -0.2 4,061,541 + -0.5 4,061,542 - -1.4 4,061,542 - -0.3 4,061,622 + -0.5 4,061,690 + -0.6 4,061,711 + CA264_17415 0.13 -1.1 4,061,740 + CA264_17415 0.27 -0.6 4,061,805 + CA264_17415 0.60 -2.0 4,061,816 - CA264_17415 0.65 +0.0 4,061,852 + CA264_17415 0.83 -0.7 4,061,852 + CA264_17415 0.83 -1.0 4,061,853 - CA264_17415 0.84 -0.5 4,061,892 - -0.8 4,061,962 + -1.1 4,061,962 + -0.4 4,061,994 + +0.0 4,062,130 + CA264_17420 0.47 -0.3 4,062,131 - CA264_17420 0.48 -0.1 4,062,167 + CA264_17420 0.62 -1.4 4,062,175 + CA264_17420 0.65 +0.6 4,062,193 - CA264_17420 0.73 -0.2 4,062,193 - CA264_17420 0.73 -0.7 4,062,193 - CA264_17420 0.73 -0.6 4,062,225 - CA264_17420 0.86 +0.2 4,062,246 - -0.7 4,062,261 + -0.5 4,062,261 + -0.4 4,062,261 + -0.3 4,062,262 - +0.2 4,062,262 - +0.5 4,062,280 + -0.4 4,062,281 - -0.6
Or see this region's nucleotide sequence