Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15245 and CA264_15250 are separated by 11 nucleotides CA264_15250 and CA264_15255 overlap by 4 nucleotides CA264_15255 and CA264_15260 are separated by 39 nucleotides
CA264_15245: CA264_15245 - hypothetical protein, at 3,570,864 to 3,572,252
_15245
CA264_15250: CA264_15250 - cbs domain containing protein, at 3,572,264 to 3,572,929
_15250
CA264_15255: CA264_15255 - alpha/beta hydrolase, at 3,572,926 to 3,573,699
_15255
CA264_15260: CA264_15260 - glutamine amidotransferase, at 3,573,739 to 3,574,320
_15260
Position (kb)
3572
3573 Strain fitness (log2 ratio)
-2
-1
0
1 at 3571.291 kb on + strand, within CA264_15245 at 3571.292 kb on - strand, within CA264_15245 at 3571.318 kb on + strand, within CA264_15245 at 3571.327 kb on + strand, within CA264_15245 at 3571.328 kb on - strand, within CA264_15245 at 3571.328 kb on - strand, within CA264_15245 at 3571.420 kb on + strand, within CA264_15245 at 3571.497 kb on - strand, within CA264_15245 at 3571.498 kb on + strand, within CA264_15245 at 3571.547 kb on - strand, within CA264_15245 at 3571.549 kb on + strand, within CA264_15245 at 3571.669 kb on + strand, within CA264_15245 at 3571.669 kb on + strand, within CA264_15245 at 3571.683 kb on + strand, within CA264_15245 at 3571.683 kb on + strand, within CA264_15245 at 3571.747 kb on + strand, within CA264_15245 at 3571.748 kb on - strand, within CA264_15245 at 3571.856 kb on - strand, within CA264_15245 at 3571.861 kb on - strand, within CA264_15245 at 3571.861 kb on - strand, within CA264_15245 at 3571.939 kb on + strand, within CA264_15245 at 3571.998 kb on - strand, within CA264_15245 at 3571.999 kb on + strand, within CA264_15245 at 3572.005 kb on - strand, within CA264_15245 at 3572.005 kb on - strand, within CA264_15245 at 3572.008 kb on + strand, within CA264_15245 at 3572.227 kb on - strand at 3572.270 kb on - strand at 3572.270 kb on - strand at 3572.270 kb on - strand at 3572.278 kb on - strand at 3572.455 kb on - strand, within CA264_15250 at 3572.455 kb on - strand, within CA264_15250 at 3572.455 kb on - strand, within CA264_15250 at 3572.620 kb on - strand, within CA264_15250 at 3572.689 kb on - strand, within CA264_15250 at 3572.803 kb on - strand, within CA264_15250 at 3572.944 kb on - strand at 3572.944 kb on - strand at 3572.968 kb on + strand at 3573.021 kb on + strand, within CA264_15255 at 3573.021 kb on + strand, within CA264_15255 at 3573.022 kb on - strand, within CA264_15255 at 3573.025 kb on + strand, within CA264_15255 at 3573.087 kb on + strand, within CA264_15255 at 3573.088 kb on - strand, within CA264_15255 at 3573.130 kb on + strand, within CA264_15255 at 3573.131 kb on - strand, within CA264_15255 at 3573.153 kb on + strand, within CA264_15255 at 3573.154 kb on - strand, within CA264_15255 at 3573.157 kb on - strand, within CA264_15255 at 3573.157 kb on - strand, within CA264_15255 at 3573.201 kb on + strand, within CA264_15255 at 3573.226 kb on + strand, within CA264_15255 at 3573.274 kb on - strand, within CA264_15255 at 3573.274 kb on - strand, within CA264_15255 at 3573.297 kb on - strand, within CA264_15255 at 3573.584 kb on - strand, within CA264_15255 at 3573.638 kb on - strand at 3573.658 kb on + strand at 3573.663 kb on - strand at 3573.663 kb on - strand at 3573.663 kb on - strand at 3573.668 kb on + strand at 3573.763 kb on - strand at 3573.771 kb on + strand at 3573.771 kb on + strand at 3573.774 kb on + strand at 3573.775 kb on - strand at 3573.929 kb on - strand, within CA264_15260
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 3,571,291 + CA264_15245 0.31 -0.9 3,571,292 - CA264_15245 0.31 -0.8 3,571,318 + CA264_15245 0.33 -1.6 3,571,327 + CA264_15245 0.33 -0.3 3,571,328 - CA264_15245 0.33 -0.0 3,571,328 - CA264_15245 0.33 -0.3 3,571,420 + CA264_15245 0.40 -0.9 3,571,497 - CA264_15245 0.46 -2.0 3,571,498 + CA264_15245 0.46 +1.3 3,571,547 - CA264_15245 0.49 -2.0 3,571,549 + CA264_15245 0.49 -0.2 3,571,669 + CA264_15245 0.58 -1.3 3,571,669 + CA264_15245 0.58 -0.7 3,571,683 + CA264_15245 0.59 +0.1 3,571,683 + CA264_15245 0.59 +0.5 3,571,747 + CA264_15245 0.64 -0.8 3,571,748 - CA264_15245 0.64 -1.4 3,571,856 - CA264_15245 0.71 -0.9 3,571,861 - CA264_15245 0.72 -0.8 3,571,861 - CA264_15245 0.72 +0.4 3,571,939 + CA264_15245 0.77 -0.7 3,571,998 - CA264_15245 0.82 -0.8 3,571,999 + CA264_15245 0.82 -1.3 3,572,005 - CA264_15245 0.82 -0.6 3,572,005 - CA264_15245 0.82 -0.0 3,572,008 + CA264_15245 0.82 -0.7 3,572,227 - -1.2 3,572,270 - -1.2 3,572,270 - -1.4 3,572,270 - -1.2 3,572,278 - -0.4 3,572,455 - CA264_15250 0.29 -0.2 3,572,455 - CA264_15250 0.29 -1.3 3,572,455 - CA264_15250 0.29 -1.4 3,572,620 - CA264_15250 0.53 -1.1 3,572,689 - CA264_15250 0.64 -1.5 3,572,803 - CA264_15250 0.81 -1.3 3,572,944 - -0.4 3,572,944 - -0.5 3,572,968 + -0.9 3,573,021 + CA264_15255 0.12 -1.4 3,573,021 + CA264_15255 0.12 -0.7 3,573,022 - CA264_15255 0.12 +0.2 3,573,025 + CA264_15255 0.13 -1.2 3,573,087 + CA264_15255 0.21 -0.3 3,573,088 - CA264_15255 0.21 -0.7 3,573,130 + CA264_15255 0.26 -0.4 3,573,131 - CA264_15255 0.26 -0.4 3,573,153 + CA264_15255 0.29 -0.3 3,573,154 - CA264_15255 0.29 +0.6 3,573,157 - CA264_15255 0.30 -0.5 3,573,157 - CA264_15255 0.30 -1.6 3,573,201 + CA264_15255 0.36 -0.2 3,573,226 + CA264_15255 0.39 -0.5 3,573,274 - CA264_15255 0.45 +0.8 3,573,274 - CA264_15255 0.45 -0.7 3,573,297 - CA264_15255 0.48 -0.9 3,573,584 - CA264_15255 0.85 -0.6 3,573,638 - -0.4 3,573,658 + -1.2 3,573,663 - -1.8 3,573,663 - -0.2 3,573,663 - +1.2 3,573,668 + -0.1 3,573,763 - -0.8 3,573,771 + -0.6 3,573,771 + -0.5 3,573,774 + -0.8 3,573,775 - -1.4 3,573,929 - CA264_15260 0.33 -0.5
Or see this region's nucleotide sequence