Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14840 and CA264_14845 are separated by 183 nucleotides CA264_14845 and CA264_14850 are separated by 240 nucleotides
CA264_14840: CA264_14840 - hypothetical protein, at 3,485,201 to 3,486,928
_14840
CA264_14845: CA264_14845 - magnesium chelatase, at 3,487,112 to 3,488,005
_14845
CA264_14850: CA264_14850 - hypothetical protein, at 3,488,246 to 3,488,827
_14850
Position (kb)
3487
3488
3489 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3486.112 kb on + strand, within CA264_14840 at 3486.116 kb on + strand, within CA264_14840 at 3486.116 kb on + strand, within CA264_14840 at 3486.117 kb on - strand, within CA264_14840 at 3486.117 kb on - strand, within CA264_14840 at 3486.127 kb on - strand, within CA264_14840 at 3486.148 kb on + strand, within CA264_14840 at 3486.156 kb on + strand, within CA264_14840 at 3486.157 kb on - strand, within CA264_14840 at 3486.195 kb on + strand, within CA264_14840 at 3486.205 kb on + strand, within CA264_14840 at 3486.217 kb on - strand, within CA264_14840 at 3486.223 kb on + strand, within CA264_14840 at 3486.230 kb on - strand, within CA264_14840 at 3486.271 kb on - strand, within CA264_14840 at 3486.274 kb on + strand, within CA264_14840 at 3486.274 kb on + strand, within CA264_14840 at 3486.278 kb on + strand, within CA264_14840 at 3486.278 kb on + strand, within CA264_14840 at 3486.278 kb on + strand, within CA264_14840 at 3486.319 kb on + strand, within CA264_14840 at 3486.319 kb on + strand, within CA264_14840 at 3486.352 kb on - strand, within CA264_14840 at 3486.355 kb on + strand, within CA264_14840 at 3486.360 kb on + strand, within CA264_14840 at 3486.402 kb on + strand, within CA264_14840 at 3486.432 kb on + strand, within CA264_14840 at 3486.433 kb on - strand, within CA264_14840 at 3486.433 kb on - strand, within CA264_14840 at 3486.433 kb on - strand, within CA264_14840 at 3486.433 kb on - strand, within CA264_14840 at 3486.433 kb on - strand, within CA264_14840 at 3486.433 kb on - strand, within CA264_14840 at 3486.456 kb on - strand, within CA264_14840 at 3486.470 kb on + strand, within CA264_14840 at 3486.520 kb on + strand, within CA264_14840 at 3486.520 kb on + strand, within CA264_14840 at 3486.521 kb on - strand, within CA264_14840 at 3486.521 kb on - strand, within CA264_14840 at 3486.529 kb on - strand, within CA264_14840 at 3486.531 kb on + strand, within CA264_14840 at 3486.532 kb on - strand, within CA264_14840 at 3486.586 kb on - strand, within CA264_14840 at 3486.588 kb on + strand, within CA264_14840 at 3486.589 kb on - strand, within CA264_14840 at 3486.616 kb on - strand, within CA264_14840 at 3486.616 kb on - strand, within CA264_14840 at 3486.641 kb on - strand, within CA264_14840 at 3486.695 kb on - strand, within CA264_14840 at 3486.704 kb on - strand, within CA264_14840 at 3486.704 kb on - strand, within CA264_14840 at 3486.810 kb on - strand at 3486.814 kb on + strand at 3486.814 kb on + strand at 3486.815 kb on - strand at 3486.831 kb on + strand at 3486.839 kb on - strand at 3486.847 kb on + strand at 3486.847 kb on + strand at 3486.848 kb on - strand at 3486.848 kb on - strand at 3486.878 kb on - strand at 3486.937 kb on - strand at 3486.937 kb on - strand at 3487.020 kb on + strand at 3487.020 kb on + strand at 3487.021 kb on - strand at 3487.024 kb on + strand at 3487.046 kb on - strand at 3487.098 kb on - strand at 3487.104 kb on + strand at 3487.105 kb on - strand at 3487.105 kb on - strand at 3487.177 kb on - strand at 3487.221 kb on + strand, within CA264_14845 at 3487.222 kb on - strand, within CA264_14845 at 3487.222 kb on - strand, within CA264_14845 at 3487.472 kb on - strand, within CA264_14845 at 3487.474 kb on + strand, within CA264_14845 at 3487.475 kb on - strand, within CA264_14845 at 3487.475 kb on - strand, within CA264_14845 at 3487.495 kb on + strand, within CA264_14845 at 3487.510 kb on + strand, within CA264_14845 at 3487.510 kb on + strand, within CA264_14845 at 3487.535 kb on + strand, within CA264_14845 at 3487.587 kb on - strand, within CA264_14845 at 3487.599 kb on + strand, within CA264_14845 at 3487.599 kb on + strand, within CA264_14845 at 3487.600 kb on - strand, within CA264_14845 at 3487.636 kb on - strand, within CA264_14845 at 3487.717 kb on - strand, within CA264_14845 at 3487.900 kb on - strand, within CA264_14845 at 3487.900 kb on - strand, within CA264_14845 at 3488.038 kb on - strand at 3488.042 kb on + strand at 3488.104 kb on - strand at 3488.150 kb on - strand at 3488.170 kb on + strand at 3488.179 kb on + strand at 3488.179 kb on + strand at 3488.179 kb on + strand at 3488.180 kb on - strand at 3488.221 kb on + strand at 3488.222 kb on - strand at 3488.224 kb on + strand at 3488.224 kb on + strand at 3488.245 kb on + strand at 3488.262 kb on + strand at 3488.284 kb on + strand at 3488.422 kb on - strand, within CA264_14850 at 3488.454 kb on + strand, within CA264_14850 at 3488.455 kb on - strand, within CA264_14850 at 3488.459 kb on + strand, within CA264_14850 at 3488.460 kb on - strand, within CA264_14850 at 3488.490 kb on + strand, within CA264_14850 at 3488.490 kb on + strand, within CA264_14850 at 3488.490 kb on + strand, within CA264_14850 at 3488.490 kb on + strand, within CA264_14850 at 3488.490 kb on + strand, within CA264_14850 at 3488.491 kb on - strand, within CA264_14850 at 3488.499 kb on + strand, within CA264_14850 at 3488.499 kb on + strand, within CA264_14850 at 3488.499 kb on + strand, within CA264_14850 at 3488.504 kb on + strand, within CA264_14850 at 3488.511 kb on + strand, within CA264_14850 at 3488.511 kb on + strand, within CA264_14850 at 3488.511 kb on + strand, within CA264_14850 at 3488.512 kb on - strand, within CA264_14850 at 3488.512 kb on - strand, within CA264_14850 at 3488.516 kb on + strand, within CA264_14850 at 3488.520 kb on + strand, within CA264_14850 at 3488.520 kb on + strand, within CA264_14850 at 3488.520 kb on + strand, within CA264_14850 at 3488.521 kb on - strand, within CA264_14850 at 3488.521 kb on - strand, within CA264_14850 at 3488.521 kb on - strand, within CA264_14850 at 3488.526 kb on + strand, within CA264_14850 at 3488.527 kb on - strand, within CA264_14850 at 3488.561 kb on + strand, within CA264_14850 at 3488.561 kb on + strand, within CA264_14850 at 3488.562 kb on - strand, within CA264_14850 at 3488.656 kb on + strand, within CA264_14850 at 3488.664 kb on + strand, within CA264_14850 at 3488.665 kb on - strand, within CA264_14850 at 3488.669 kb on + strand, within CA264_14850 at 3488.670 kb on - strand, within CA264_14850 at 3488.750 kb on + strand, within CA264_14850 at 3488.751 kb on - strand, within CA264_14850 at 3488.791 kb on + strand at 3488.791 kb on + strand at 3488.791 kb on + strand at 3488.791 kb on + strand at 3488.792 kb on - strand at 3488.808 kb on - strand at 3488.810 kb on - strand at 3488.810 kb on - strand at 3488.830 kb on + strand at 3488.837 kb on + strand at 3488.840 kb on + strand at 3488.841 kb on - strand at 3488.841 kb on - strand at 3488.841 kb on - strand at 3488.847 kb on + strand at 3488.848 kb on - strand at 3488.892 kb on + strand at 3488.893 kb on - strand at 3488.904 kb on + strand at 3488.914 kb on + strand at 3488.914 kb on + strand at 3488.914 kb on + strand at 3488.914 kb on + strand at 3488.914 kb on + strand at 3488.914 kb on + strand at 3488.915 kb on - strand at 3488.915 kb on - strand at 3488.946 kb on + strand at 3488.946 kb on + strand at 3488.947 kb on - strand at 3488.947 kb on - strand at 3488.947 kb on - strand at 3488.948 kb on + strand at 3488.951 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 3,486,112 + CA264_14840 0.53 +0.5 3,486,116 + CA264_14840 0.53 +0.5 3,486,116 + CA264_14840 0.53 +0.3 3,486,117 - CA264_14840 0.53 -0.0 3,486,117 - CA264_14840 0.53 +0.2 3,486,127 - CA264_14840 0.54 +0.7 3,486,148 + CA264_14840 0.55 +0.2 3,486,156 + CA264_14840 0.55 -0.1 3,486,157 - CA264_14840 0.55 -0.0 3,486,195 + CA264_14840 0.58 -0.1 3,486,205 + CA264_14840 0.58 -1.0 3,486,217 - CA264_14840 0.59 -0.1 3,486,223 + CA264_14840 0.59 +1.2 3,486,230 - CA264_14840 0.60 +0.1 3,486,271 - CA264_14840 0.62 -0.6 3,486,274 + CA264_14840 0.62 +0.4 3,486,274 + CA264_14840 0.62 -1.3 3,486,278 + CA264_14840 0.62 -0.6 3,486,278 + CA264_14840 0.62 +0.4 3,486,278 + CA264_14840 0.62 +0.4 3,486,319 + CA264_14840 0.65 +0.5 3,486,319 + CA264_14840 0.65 +0.6 3,486,352 - CA264_14840 0.67 -0.4 3,486,355 + CA264_14840 0.67 +0.3 3,486,360 + CA264_14840 0.67 +0.0 3,486,402 + CA264_14840 0.70 +1.7 3,486,432 + CA264_14840 0.71 +1.0 3,486,433 - CA264_14840 0.71 -0.3 3,486,433 - CA264_14840 0.71 -0.1 3,486,433 - CA264_14840 0.71 -0.3 3,486,433 - CA264_14840 0.71 +1.8 3,486,433 - CA264_14840 0.71 -0.1 3,486,433 - CA264_14840 0.71 +0.7 3,486,456 - CA264_14840 0.73 -0.5 3,486,470 + CA264_14840 0.73 +0.1 3,486,520 + CA264_14840 0.76 -0.1 3,486,520 + CA264_14840 0.76 -1.0 3,486,521 - CA264_14840 0.76 -0.0 3,486,521 - CA264_14840 0.76 +0.6 3,486,529 - CA264_14840 0.77 -0.1 3,486,531 + CA264_14840 0.77 +0.5 3,486,532 - CA264_14840 0.77 +0.3 3,486,586 - CA264_14840 0.80 +0.1 3,486,588 + CA264_14840 0.80 +0.8 3,486,589 - CA264_14840 0.80 -0.6 3,486,616 - CA264_14840 0.82 +0.5 3,486,616 - CA264_14840 0.82 +2.2 3,486,641 - CA264_14840 0.83 -0.6 3,486,695 - CA264_14840 0.86 -0.6 3,486,704 - CA264_14840 0.87 +0.5 3,486,704 - CA264_14840 0.87 +0.8 3,486,810 - -0.0 3,486,814 + -0.2 3,486,814 + -1.9 3,486,815 - -0.1 3,486,831 + -0.1 3,486,839 - -0.2 3,486,847 + -0.8 3,486,847 + -1.5 3,486,848 - -0.2 3,486,848 - -0.1 3,486,878 - -1.1 3,486,937 - -0.2 3,486,937 - -0.6 3,487,020 + -0.3 3,487,020 + -0.4 3,487,021 - -0.8 3,487,024 + -0.8 3,487,046 - -0.6 3,487,098 - +0.1 3,487,104 + -0.5 3,487,105 - +0.9 3,487,105 - -0.1 3,487,177 - -0.4 3,487,221 + CA264_14845 0.12 -1.1 3,487,222 - CA264_14845 0.12 +0.6 3,487,222 - CA264_14845 0.12 -0.4 3,487,472 - CA264_14845 0.40 -0.6 3,487,474 + CA264_14845 0.40 -1.2 3,487,475 - CA264_14845 0.41 -0.1 3,487,475 - CA264_14845 0.41 -0.4 3,487,495 + CA264_14845 0.43 -0.6 3,487,510 + CA264_14845 0.45 -0.5 3,487,510 + CA264_14845 0.45 -0.4 3,487,535 + CA264_14845 0.47 -1.2 3,487,587 - CA264_14845 0.53 -0.2 3,487,599 + CA264_14845 0.54 -0.6 3,487,599 + CA264_14845 0.54 -1.6 3,487,600 - CA264_14845 0.55 +0.2 3,487,636 - CA264_14845 0.59 +0.0 3,487,717 - CA264_14845 0.68 -0.6 3,487,900 - CA264_14845 0.88 -0.3 3,487,900 - CA264_14845 0.88 -0.2 3,488,038 - +1.8 3,488,042 + -0.8 3,488,104 - -1.0 3,488,150 - -0.9 3,488,170 + -0.9 3,488,179 + -0.9 3,488,179 + -0.4 3,488,179 + -1.4 3,488,180 - -0.9 3,488,221 + -0.1 3,488,222 - -0.7 3,488,224 + +0.8 3,488,224 + -0.0 3,488,245 + -1.1 3,488,262 + -0.4 3,488,284 + -0.2 3,488,422 - CA264_14850 0.30 -0.9 3,488,454 + CA264_14850 0.36 +0.2 3,488,455 - CA264_14850 0.36 -1.4 3,488,459 + CA264_14850 0.37 -0.2 3,488,460 - CA264_14850 0.37 -0.5 3,488,490 + CA264_14850 0.42 -0.1 3,488,490 + CA264_14850 0.42 -0.8 3,488,490 + CA264_14850 0.42 -1.2 3,488,490 + CA264_14850 0.42 +0.6 3,488,490 + CA264_14850 0.42 -0.5 3,488,491 - CA264_14850 0.42 -0.1 3,488,499 + CA264_14850 0.43 -0.1 3,488,499 + CA264_14850 0.43 -0.3 3,488,499 + CA264_14850 0.43 -0.0 3,488,504 + CA264_14850 0.44 -0.6 3,488,511 + CA264_14850 0.46 -0.1 3,488,511 + CA264_14850 0.46 +0.4 3,488,511 + CA264_14850 0.46 -0.3 3,488,512 - CA264_14850 0.46 -0.1 3,488,512 - CA264_14850 0.46 -1.1 3,488,516 + CA264_14850 0.46 -0.8 3,488,520 + CA264_14850 0.47 -0.8 3,488,520 + CA264_14850 0.47 -0.5 3,488,520 + CA264_14850 0.47 -2.2 3,488,521 - CA264_14850 0.47 +0.2 3,488,521 - CA264_14850 0.47 -2.0 3,488,521 - CA264_14850 0.47 -0.1 3,488,526 + CA264_14850 0.48 +0.6 3,488,527 - CA264_14850 0.48 +1.8 3,488,561 + CA264_14850 0.54 +0.8 3,488,561 + CA264_14850 0.54 +0.1 3,488,562 - CA264_14850 0.54 -1.2 3,488,656 + CA264_14850 0.70 +0.4 3,488,664 + CA264_14850 0.72 -0.6 3,488,665 - CA264_14850 0.72 -0.7 3,488,669 + CA264_14850 0.73 -0.4 3,488,670 - CA264_14850 0.73 -1.0 3,488,750 + CA264_14850 0.87 -0.2 3,488,751 - CA264_14850 0.87 -1.9 3,488,791 + -0.3 3,488,791 + -0.3 3,488,791 + -0.3 3,488,791 + +0.2 3,488,792 - -2.0 3,488,808 - -0.8 3,488,810 - -0.4 3,488,810 - -1.7 3,488,830 + -0.6 3,488,837 + -0.2 3,488,840 + -0.0 3,488,841 - -0.2 3,488,841 - -0.8 3,488,841 - +0.4 3,488,847 + -2.4 3,488,848 - +1.4 3,488,892 + -1.4 3,488,893 - -0.3 3,488,904 + -1.1 3,488,914 + -0.8 3,488,914 + -0.2 3,488,914 + -0.1 3,488,914 + +1.2 3,488,914 + -0.7 3,488,914 + -0.2 3,488,915 - +0.2 3,488,915 - -1.4 3,488,946 + -0.2 3,488,946 + +0.1 3,488,947 - -2.3 3,488,947 - -1.2 3,488,947 - +0.0 3,488,948 + -1.1 3,488,951 - -1.4
Or see this region's nucleotide sequence