Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14380 and CA264_14385 are separated by 195 nucleotides CA264_14385 and CA264_14390 are separated by 64 nucleotides
CA264_14380: CA264_14380 - aminobenzoyl-glutamate transporter, at 3,375,297 to 3,376,823
_14380
CA264_14385: CA264_14385 - LD-carboxypeptidase, at 3,377,019 to 3,377,912
_14385
CA264_14390: CA264_14390 - hypothetical protein, at 3,377,977 to 3,379,647
_14390
Position (kb)
3377
3378 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3376.100 kb on - strand, within CA264_14380 at 3376.184 kb on - strand, within CA264_14380 at 3376.184 kb on - strand, within CA264_14380 at 3376.221 kb on + strand, within CA264_14380 at 3376.365 kb on - strand, within CA264_14380 at 3376.393 kb on + strand, within CA264_14380 at 3376.393 kb on + strand, within CA264_14380 at 3376.393 kb on + strand, within CA264_14380 at 3376.393 kb on + strand, within CA264_14380 at 3376.393 kb on + strand, within CA264_14380 at 3376.394 kb on - strand, within CA264_14380 at 3376.394 kb on - strand, within CA264_14380 at 3376.398 kb on + strand, within CA264_14380 at 3376.399 kb on - strand, within CA264_14380 at 3376.399 kb on - strand, within CA264_14380 at 3376.421 kb on + strand, within CA264_14380 at 3376.422 kb on - strand, within CA264_14380 at 3376.731 kb on + strand at 3376.731 kb on + strand at 3376.736 kb on + strand at 3376.736 kb on + strand at 3376.737 kb on - strand at 3376.823 kb on + strand at 3376.824 kb on - strand at 3376.825 kb on + strand at 3376.826 kb on - strand at 3376.844 kb on + strand at 3376.978 kb on - strand at 3376.996 kb on + strand at 3376.996 kb on + strand at 3376.997 kb on - strand at 3377.014 kb on + strand at 3377.015 kb on - strand at 3377.015 kb on - strand at 3377.015 kb on - strand at 3377.231 kb on + strand, within CA264_14385 at 3377.231 kb on + strand, within CA264_14385 at 3377.231 kb on + strand, within CA264_14385 at 3377.344 kb on + strand, within CA264_14385 at 3377.344 kb on + strand, within CA264_14385 at 3377.344 kb on + strand, within CA264_14385 at 3377.389 kb on + strand, within CA264_14385 at 3377.390 kb on - strand, within CA264_14385 at 3377.482 kb on - strand, within CA264_14385 at 3377.631 kb on + strand, within CA264_14385 at 3377.645 kb on - strand, within CA264_14385 at 3377.770 kb on + strand, within CA264_14385 at 3377.770 kb on + strand, within CA264_14385 at 3377.771 kb on - strand, within CA264_14385 at 3377.836 kb on + strand at 3377.895 kb on - strand at 3377.911 kb on - strand at 3377.980 kb on + strand at 3377.980 kb on + strand at 3377.980 kb on + strand at 3377.980 kb on + strand at 3377.980 kb on + strand at 3377.980 kb on + strand at 3377.981 kb on - strand at 3378.002 kb on + strand at 3378.125 kb on - strand at 3378.157 kb on - strand, within CA264_14390 at 3378.223 kb on + strand, within CA264_14390 at 3378.240 kb on + strand, within CA264_14390 at 3378.240 kb on + strand, within CA264_14390 at 3378.244 kb on + strand, within CA264_14390 at 3378.286 kb on + strand, within CA264_14390 at 3378.289 kb on + strand, within CA264_14390 at 3378.291 kb on + strand, within CA264_14390 at 3378.291 kb on + strand, within CA264_14390 at 3378.424 kb on + strand, within CA264_14390 at 3378.427 kb on + strand, within CA264_14390 at 3378.521 kb on + strand, within CA264_14390 at 3378.584 kb on + strand, within CA264_14390 at 3378.612 kb on + strand, within CA264_14390 at 3378.613 kb on - strand, within CA264_14390 at 3378.617 kb on - strand, within CA264_14390 at 3378.619 kb on + strand, within CA264_14390 at 3378.619 kb on + strand, within CA264_14390 at 3378.624 kb on + strand, within CA264_14390 at 3378.689 kb on + strand, within CA264_14390 at 3378.689 kb on + strand, within CA264_14390 at 3378.730 kb on - strand, within CA264_14390 at 3378.797 kb on + strand, within CA264_14390 at 3378.798 kb on - strand, within CA264_14390 at 3378.798 kb on - strand, within CA264_14390 at 3378.802 kb on + strand, within CA264_14390 at 3378.802 kb on + strand, within CA264_14390 at 3378.846 kb on - strand, within CA264_14390 at 3378.873 kb on + strand, within CA264_14390 at 3378.875 kb on + strand, within CA264_14390
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 3,376,100 - CA264_14380 0.53 -2.1 3,376,184 - CA264_14380 0.58 +0.3 3,376,184 - CA264_14380 0.58 -0.3 3,376,221 + CA264_14380 0.61 +0.1 3,376,365 - CA264_14380 0.70 -0.5 3,376,393 + CA264_14380 0.72 +1.1 3,376,393 + CA264_14380 0.72 -3.1 3,376,393 + CA264_14380 0.72 -0.8 3,376,393 + CA264_14380 0.72 -0.6 3,376,393 + CA264_14380 0.72 -0.3 3,376,394 - CA264_14380 0.72 -0.3 3,376,394 - CA264_14380 0.72 -0.1 3,376,398 + CA264_14380 0.72 +1.0 3,376,399 - CA264_14380 0.72 -0.3 3,376,399 - CA264_14380 0.72 -0.2 3,376,421 + CA264_14380 0.74 +0.1 3,376,422 - CA264_14380 0.74 -0.1 3,376,731 + -0.9 3,376,731 + -0.8 3,376,736 + -1.2 3,376,736 + +2.3 3,376,737 - -0.9 3,376,823 + -0.5 3,376,824 - -0.7 3,376,825 + -0.7 3,376,826 - -1.6 3,376,844 + -1.3 3,376,978 - -0.4 3,376,996 + -1.1 3,376,996 + +0.7 3,376,997 - +0.2 3,377,014 + -0.1 3,377,015 - -0.6 3,377,015 - -0.1 3,377,015 - -1.3 3,377,231 + CA264_14385 0.24 +1.0 3,377,231 + CA264_14385 0.24 -2.0 3,377,231 + CA264_14385 0.24 -1.3 3,377,344 + CA264_14385 0.36 -0.2 3,377,344 + CA264_14385 0.36 -1.3 3,377,344 + CA264_14385 0.36 -1.2 3,377,389 + CA264_14385 0.41 -1.1 3,377,390 - CA264_14385 0.41 +0.4 3,377,482 - CA264_14385 0.52 -0.5 3,377,631 + CA264_14385 0.68 -1.2 3,377,645 - CA264_14385 0.70 -1.1 3,377,770 + CA264_14385 0.84 -1.5 3,377,770 + CA264_14385 0.84 -0.5 3,377,771 - CA264_14385 0.84 -1.5 3,377,836 + -0.3 3,377,895 - -1.9 3,377,911 - +0.2 3,377,980 + +0.4 3,377,980 + -0.9 3,377,980 + -0.4 3,377,980 + -1.2 3,377,980 + -0.3 3,377,980 + -0.8 3,377,981 - -0.5 3,378,002 + -0.8 3,378,125 - +0.1 3,378,157 - CA264_14390 0.11 -0.7 3,378,223 + CA264_14390 0.15 -0.9 3,378,240 + CA264_14390 0.16 -1.6 3,378,240 + CA264_14390 0.16 -0.7 3,378,244 + CA264_14390 0.16 -1.1 3,378,286 + CA264_14390 0.18 -0.9 3,378,289 + CA264_14390 0.19 -0.3 3,378,291 + CA264_14390 0.19 -0.8 3,378,291 + CA264_14390 0.19 -2.3 3,378,424 + CA264_14390 0.27 +0.0 3,378,427 + CA264_14390 0.27 -0.9 3,378,521 + CA264_14390 0.33 -1.0 3,378,584 + CA264_14390 0.36 -1.1 3,378,612 + CA264_14390 0.38 +1.2 3,378,613 - CA264_14390 0.38 -0.8 3,378,617 - CA264_14390 0.38 +0.7 3,378,619 + CA264_14390 0.38 -0.3 3,378,619 + CA264_14390 0.38 -0.3 3,378,624 + CA264_14390 0.39 +1.2 3,378,689 + CA264_14390 0.43 -0.5 3,378,689 + CA264_14390 0.43 +0.4 3,378,730 - CA264_14390 0.45 +0.3 3,378,797 + CA264_14390 0.49 -0.3 3,378,798 - CA264_14390 0.49 -0.3 3,378,798 - CA264_14390 0.49 -1.3 3,378,802 + CA264_14390 0.49 +0.3 3,378,802 + CA264_14390 0.49 -1.8 3,378,846 - CA264_14390 0.52 -0.3 3,378,873 + CA264_14390 0.54 -1.9 3,378,875 + CA264_14390 0.54 -0.4
Or see this region's nucleotide sequence