Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14010 and CA264_14015 are separated by 20 nucleotides CA264_14015 and CA264_14020 are separated by 455 nucleotides
CA264_14010: CA264_14010 - carbohydrate kinase, at 3,280,428 to 3,281,459
_14010
CA264_14015: CA264_14015 - bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase, at 3,281,480 to 3,282,151
_14015
CA264_14020: CA264_14020 - hypothetical protein, at 3,282,607 to 3,284,424
_14020
Position (kb)
3281
3282
3283 Strain fitness (log2 ratio)
-2
-1
0
1 at 3280.590 kb on + strand, within CA264_14010 at 3280.595 kb on + strand, within CA264_14010 at 3280.595 kb on + strand, within CA264_14010 at 3280.702 kb on - strand, within CA264_14010 at 3280.702 kb on - strand, within CA264_14010 at 3280.746 kb on + strand, within CA264_14010 at 3280.747 kb on - strand, within CA264_14010 at 3280.752 kb on - strand, within CA264_14010 at 3280.818 kb on + strand, within CA264_14010 at 3280.818 kb on + strand, within CA264_14010 at 3280.960 kb on - strand, within CA264_14010 at 3280.960 kb on - strand, within CA264_14010 at 3281.132 kb on - strand, within CA264_14010 at 3281.180 kb on + strand, within CA264_14010 at 3281.217 kb on + strand, within CA264_14010 at 3281.218 kb on - strand, within CA264_14010 at 3281.300 kb on + strand, within CA264_14010 at 3281.317 kb on - strand, within CA264_14010 at 3281.325 kb on + strand, within CA264_14010 at 3281.466 kb on - strand at 3281.468 kb on - strand at 3281.479 kb on + strand at 3281.480 kb on - strand at 3281.514 kb on + strand at 3281.544 kb on - strand at 3281.545 kb on + strand at 3281.546 kb on - strand at 3281.588 kb on + strand, within CA264_14015 at 3281.588 kb on + strand, within CA264_14015 at 3281.589 kb on - strand, within CA264_14015 at 3281.618 kb on - strand, within CA264_14015 at 3281.650 kb on + strand, within CA264_14015 at 3281.713 kb on - strand, within CA264_14015 at 3281.738 kb on + strand, within CA264_14015 at 3281.738 kb on + strand, within CA264_14015 at 3281.739 kb on - strand, within CA264_14015 at 3281.962 kb on + strand, within CA264_14015 at 3281.998 kb on + strand, within CA264_14015 at 3282.068 kb on - strand, within CA264_14015 at 3282.149 kb on + strand at 3282.181 kb on + strand at 3282.289 kb on - strand at 3282.318 kb on - strand at 3282.337 kb on - strand at 3282.345 kb on + strand at 3282.346 kb on - strand at 3282.346 kb on - strand at 3282.427 kb on - strand at 3282.428 kb on + strand at 3282.429 kb on - strand at 3282.452 kb on - strand at 3282.594 kb on - strand at 3282.639 kb on - strand at 3282.755 kb on - strand at 3282.767 kb on - strand at 3282.919 kb on + strand, within CA264_14020 at 3282.919 kb on + strand, within CA264_14020 at 3282.946 kb on - strand, within CA264_14020 at 3282.962 kb on - strand, within CA264_14020 at 3282.962 kb on - strand, within CA264_14020 at 3282.977 kb on - strand, within CA264_14020 at 3283.046 kb on + strand, within CA264_14020 at 3283.046 kb on + strand, within CA264_14020 at 3283.046 kb on + strand, within CA264_14020 at 3283.047 kb on - strand, within CA264_14020 at 3283.047 kb on - strand, within CA264_14020 at 3283.084 kb on + strand, within CA264_14020
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 3,280,590 + CA264_14010 0.16 -1.0 3,280,595 + CA264_14010 0.16 -1.4 3,280,595 + CA264_14010 0.16 -0.1 3,280,702 - CA264_14010 0.27 +0.1 3,280,702 - CA264_14010 0.27 -0.6 3,280,746 + CA264_14010 0.31 -0.4 3,280,747 - CA264_14010 0.31 -0.9 3,280,752 - CA264_14010 0.31 -0.3 3,280,818 + CA264_14010 0.38 -1.2 3,280,818 + CA264_14010 0.38 -0.1 3,280,960 - CA264_14010 0.52 -0.7 3,280,960 - CA264_14010 0.52 +0.8 3,281,132 - CA264_14010 0.68 -0.6 3,281,180 + CA264_14010 0.73 -0.7 3,281,217 + CA264_14010 0.76 -0.3 3,281,218 - CA264_14010 0.77 -2.1 3,281,300 + CA264_14010 0.84 +1.4 3,281,317 - CA264_14010 0.86 -0.4 3,281,325 + CA264_14010 0.87 +0.1 3,281,466 - +1.4 3,281,468 - -0.9 3,281,479 + -0.2 3,281,480 - -0.6 3,281,514 + -0.6 3,281,544 - -1.1 3,281,545 + -0.9 3,281,546 - -0.1 3,281,588 + CA264_14015 0.16 -2.1 3,281,588 + CA264_14015 0.16 -1.4 3,281,589 - CA264_14015 0.16 +0.3 3,281,618 - CA264_14015 0.21 -0.2 3,281,650 + CA264_14015 0.25 -0.9 3,281,713 - CA264_14015 0.35 -0.7 3,281,738 + CA264_14015 0.38 -1.8 3,281,738 + CA264_14015 0.38 +0.7 3,281,739 - CA264_14015 0.39 -0.0 3,281,962 + CA264_14015 0.72 -0.2 3,281,998 + CA264_14015 0.77 -0.9 3,282,068 - CA264_14015 0.88 -2.3 3,282,149 + -0.1 3,282,181 + -2.4 3,282,289 - -0.4 3,282,318 - +0.8 3,282,337 - +0.0 3,282,345 + -0.3 3,282,346 - -1.2 3,282,346 - +0.6 3,282,427 - +0.0 3,282,428 + -0.6 3,282,429 - -1.0 3,282,452 - +0.2 3,282,594 - -0.2 3,282,639 - -2.0 3,282,755 - -0.4 3,282,767 - -1.2 3,282,919 + CA264_14020 0.17 +0.6 3,282,919 + CA264_14020 0.17 -0.7 3,282,946 - CA264_14020 0.19 -0.7 3,282,962 - CA264_14020 0.20 +0.6 3,282,962 - CA264_14020 0.20 -0.6 3,282,977 - CA264_14020 0.20 -1.4 3,283,046 + CA264_14020 0.24 -1.3 3,283,046 + CA264_14020 0.24 -0.7 3,283,046 + CA264_14020 0.24 -1.8 3,283,047 - CA264_14020 0.24 -0.9 3,283,047 - CA264_14020 0.24 +0.0 3,283,084 + CA264_14020 0.26 -2.6
Or see this region's nucleotide sequence