Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12850 and CA264_12855 are separated by 170 nucleotides CA264_12855 and CA264_12860 overlap by 1 nucleotides CA264_12860 and CA264_12865 are separated by 10 nucleotides CA264_12865 and CA264_12870 are separated by 755 nucleotides
CA264_12850: CA264_12850 - hypothetical protein, at 2,995,642 to 2,995,854
_12850
CA264_12855: CA264_12855 - hypothetical protein, at 2,996,025 to 2,996,267
_12855
CA264_12860: CA264_12860 - hypothetical protein, at 2,996,267 to 2,996,773
_12860
CA264_12865: CA264_12865 - Zn-dependent hydrolase, at 2,996,784 to 2,998,445
_12865
CA264_12870: CA264_12870 - deoxynucleoside kinase, at 2,999,201 to 2,999,815
_12870
Position (kb)
2996
2997
2998
2999 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2995.841 kb on + strand at 2995.903 kb on - strand at 2995.907 kb on + strand at 2996.010 kb on + strand at 2996.011 kb on - strand at 2996.024 kb on - strand at 2996.042 kb on + strand at 2996.042 kb on + strand at 2996.042 kb on + strand at 2996.043 kb on - strand at 2996.049 kb on + strand at 2996.049 kb on + strand at 2996.050 kb on - strand, within CA264_12855 at 2996.055 kb on - strand, within CA264_12855 at 2996.205 kb on + strand, within CA264_12855 at 2996.206 kb on - strand, within CA264_12855 at 2996.269 kb on - strand at 2996.538 kb on + strand, within CA264_12860 at 2996.539 kb on - strand, within CA264_12860 at 2996.562 kb on - strand, within CA264_12860 at 2996.634 kb on + strand, within CA264_12860 at 2996.634 kb on + strand, within CA264_12860 at 2996.634 kb on + strand, within CA264_12860 at 2996.727 kb on + strand at 2996.727 kb on + strand at 2996.728 kb on - strand at 2996.728 kb on - strand at 2996.803 kb on - strand at 2996.803 kb on - strand at 2996.803 kb on - strand at 2996.823 kb on + strand at 2996.823 kb on + strand at 2997.142 kb on + strand, within CA264_12865 at 2997.142 kb on + strand, within CA264_12865 at 2997.142 kb on + strand, within CA264_12865 at 2997.142 kb on + strand, within CA264_12865 at 2997.142 kb on + strand, within CA264_12865 at 2997.142 kb on + strand, within CA264_12865 at 2997.143 kb on - strand, within CA264_12865 at 2997.143 kb on - strand, within CA264_12865 at 2997.143 kb on - strand, within CA264_12865 at 2997.199 kb on + strand, within CA264_12865 at 2997.200 kb on - strand, within CA264_12865 at 2997.200 kb on - strand, within CA264_12865 at 2997.354 kb on + strand, within CA264_12865 at 2997.355 kb on - strand, within CA264_12865 at 2997.358 kb on + strand, within CA264_12865 at 2997.359 kb on - strand, within CA264_12865 at 2997.465 kb on + strand, within CA264_12865 at 2997.466 kb on - strand, within CA264_12865 at 2997.538 kb on + strand, within CA264_12865 at 2997.590 kb on + strand, within CA264_12865 at 2997.689 kb on - strand, within CA264_12865 at 2997.730 kb on + strand, within CA264_12865 at 2997.750 kb on - strand, within CA264_12865 at 2997.805 kb on + strand, within CA264_12865 at 2997.805 kb on + strand, within CA264_12865 at 2997.806 kb on - strand, within CA264_12865 at 2997.844 kb on + strand, within CA264_12865 at 2997.845 kb on - strand, within CA264_12865 at 2997.953 kb on + strand, within CA264_12865 at 2997.983 kb on - strand, within CA264_12865 at 2998.127 kb on + strand, within CA264_12865 at 2998.136 kb on + strand, within CA264_12865 at 2998.138 kb on + strand, within CA264_12865 at 2998.138 kb on + strand, within CA264_12865 at 2998.138 kb on + strand, within CA264_12865 at 2998.193 kb on - strand, within CA264_12865 at 2998.220 kb on + strand, within CA264_12865 at 2998.309 kb on + strand at 2998.309 kb on + strand at 2998.310 kb on - strand at 2998.310 kb on - strand at 2998.310 kb on - strand at 2998.426 kb on - strand at 2998.426 kb on - strand at 2998.428 kb on + strand at 2998.428 kb on + strand at 2998.428 kb on + strand at 2998.429 kb on - strand at 2998.455 kb on + strand at 2998.456 kb on - strand at 2998.480 kb on - strand at 2998.482 kb on + strand at 2998.483 kb on - strand at 2998.541 kb on - strand at 2998.588 kb on - strand at 2998.591 kb on + strand at 2998.631 kb on + strand at 2998.632 kb on - strand at 2998.651 kb on + strand at 2998.651 kb on + strand at 2998.652 kb on - strand at 2998.652 kb on - strand at 2998.652 kb on - strand at 2998.665 kb on - strand at 2998.666 kb on + strand at 2998.667 kb on - strand at 2998.667 kb on - strand at 2998.672 kb on + strand at 2998.672 kb on + strand at 2998.714 kb on + strand at 2998.715 kb on - strand at 2998.715 kb on - strand at 2998.717 kb on - strand at 2998.717 kb on - strand at 2998.807 kb on + strand at 2998.824 kb on + strand at 2998.825 kb on - strand at 2998.825 kb on - strand at 2998.863 kb on + strand at 2998.863 kb on + strand at 2998.873 kb on - strand at 2998.919 kb on - strand at 2999.077 kb on - strand at 2999.082 kb on - strand at 2999.176 kb on - strand at 2999.184 kb on - strand at 2999.184 kb on - strand at 2999.184 kb on - strand at 2999.332 kb on + strand, within CA264_12870 at 2999.337 kb on + strand, within CA264_12870 at 2999.337 kb on + strand, within CA264_12870 at 2999.338 kb on - strand, within CA264_12870 at 2999.338 kb on - strand, within CA264_12870 at 2999.365 kb on + strand, within CA264_12870 at 2999.365 kb on + strand, within CA264_12870 at 2999.366 kb on - strand, within CA264_12870 at 2999.443 kb on - strand, within CA264_12870
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 2,995,841 + -0.3 2,995,903 - -0.6 2,995,907 + +0.7 2,996,010 + +0.3 2,996,011 - -0.2 2,996,024 - -0.1 2,996,042 + +0.9 2,996,042 + +0.5 2,996,042 + -0.9 2,996,043 - -1.2 2,996,049 + +0.0 2,996,049 + -0.5 2,996,050 - CA264_12855 0.10 +0.3 2,996,055 - CA264_12855 0.12 -0.0 2,996,205 + CA264_12855 0.74 -1.0 2,996,206 - CA264_12855 0.74 -0.0 2,996,269 - -1.5 2,996,538 + CA264_12860 0.53 -0.5 2,996,539 - CA264_12860 0.54 +1.3 2,996,562 - CA264_12860 0.58 +0.8 2,996,634 + CA264_12860 0.72 -0.8 2,996,634 + CA264_12860 0.72 -0.7 2,996,634 + CA264_12860 0.72 +0.6 2,996,727 + -0.3 2,996,727 + -0.7 2,996,728 - -1.7 2,996,728 - -0.5 2,996,803 - -1.2 2,996,803 - -1.1 2,996,803 - -1.2 2,996,823 + +0.6 2,996,823 + +2.4 2,997,142 + CA264_12865 0.22 -0.2 2,997,142 + CA264_12865 0.22 +0.0 2,997,142 + CA264_12865 0.22 -1.1 2,997,142 + CA264_12865 0.22 -0.2 2,997,142 + CA264_12865 0.22 -0.3 2,997,142 + CA264_12865 0.22 -0.4 2,997,143 - CA264_12865 0.22 +0.3 2,997,143 - CA264_12865 0.22 -0.4 2,997,143 - CA264_12865 0.22 -1.0 2,997,199 + CA264_12865 0.25 -0.5 2,997,200 - CA264_12865 0.25 -0.1 2,997,200 - CA264_12865 0.25 -1.0 2,997,354 + CA264_12865 0.34 -0.0 2,997,355 - CA264_12865 0.34 +0.4 2,997,358 + CA264_12865 0.35 -1.7 2,997,359 - CA264_12865 0.35 -0.6 2,997,465 + CA264_12865 0.41 -0.6 2,997,466 - CA264_12865 0.41 -0.4 2,997,538 + CA264_12865 0.45 +0.3 2,997,590 + CA264_12865 0.48 -0.8 2,997,689 - CA264_12865 0.54 -2.1 2,997,730 + CA264_12865 0.57 -0.7 2,997,750 - CA264_12865 0.58 -0.2 2,997,805 + CA264_12865 0.61 +0.4 2,997,805 + CA264_12865 0.61 -0.2 2,997,806 - CA264_12865 0.61 -2.7 2,997,844 + CA264_12865 0.64 -0.6 2,997,845 - CA264_12865 0.64 -1.0 2,997,953 + CA264_12865 0.70 +0.3 2,997,983 - CA264_12865 0.72 -0.8 2,998,127 + CA264_12865 0.81 -0.6 2,998,136 + CA264_12865 0.81 -0.4 2,998,138 + CA264_12865 0.81 -0.6 2,998,138 + CA264_12865 0.81 -1.7 2,998,138 + CA264_12865 0.81 +1.6 2,998,193 - CA264_12865 0.85 -0.2 2,998,220 + CA264_12865 0.86 +0.2 2,998,309 + -0.4 2,998,309 + -1.8 2,998,310 - +0.6 2,998,310 - -0.1 2,998,310 - -1.2 2,998,426 - +1.5 2,998,426 - -1.2 2,998,428 + -1.3 2,998,428 + +0.3 2,998,428 + -1.1 2,998,429 - -0.2 2,998,455 + +0.3 2,998,456 - -0.2 2,998,480 - -0.4 2,998,482 + -1.0 2,998,483 - -0.2 2,998,541 - +2.4 2,998,588 - -0.4 2,998,591 + -0.6 2,998,631 + -0.7 2,998,632 - -1.0 2,998,651 + -1.4 2,998,651 + -1.2 2,998,652 - +0.6 2,998,652 - -0.1 2,998,652 - -0.7 2,998,665 - -0.2 2,998,666 + -2.9 2,998,667 - -1.5 2,998,667 - +1.1 2,998,672 + -0.9 2,998,672 + -0.4 2,998,714 + -0.7 2,998,715 - -1.0 2,998,715 - -0.2 2,998,717 - +0.1 2,998,717 - -0.0 2,998,807 + -0.3 2,998,824 + -1.5 2,998,825 - +0.0 2,998,825 - -0.3 2,998,863 + -0.3 2,998,863 + +0.0 2,998,873 - -0.1 2,998,919 - -0.2 2,999,077 - -1.3 2,999,082 - -1.8 2,999,176 - -0.0 2,999,184 - -1.0 2,999,184 - -1.2 2,999,184 - -0.7 2,999,332 + CA264_12870 0.21 +1.6 2,999,337 + CA264_12870 0.22 +0.9 2,999,337 + CA264_12870 0.22 +0.9 2,999,338 - CA264_12870 0.22 -0.3 2,999,338 - CA264_12870 0.22 -0.4 2,999,365 + CA264_12870 0.27 -1.6 2,999,365 + CA264_12870 0.27 +0.7 2,999,366 - CA264_12870 0.27 -0.6 2,999,443 - CA264_12870 0.39 +0.1
Or see this region's nucleotide sequence