Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12420 and CA264_12425 are separated by 73 nucleotides CA264_12425 and CA264_12430 overlap by 1 nucleotides
CA264_12420: CA264_12420 - ABC transporter ATP-binding protein, at 2,892,910 to 2,894,628
_12420
CA264_12425: CA264_12425 - CMP-N-acetylneuraminic acid synthetase, at 2,894,702 to 2,895,385
_12425
CA264_12430: CA264_12430 - nucleotidyltransferase, at 2,895,385 to 2,896,431
_12430
Position (kb)
2894
2895
2896 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2893.785 kb on - strand, within CA264_12420 at 2893.851 kb on + strand, within CA264_12420 at 2894.167 kb on - strand, within CA264_12420 at 2894.181 kb on + strand, within CA264_12420 at 2894.181 kb on + strand at 2894.292 kb on + strand, within CA264_12420 at 2894.338 kb on - strand, within CA264_12420 at 2894.340 kb on + strand, within CA264_12420 at 2894.446 kb on + strand, within CA264_12420 at 2894.479 kb on - strand at 2894.549 kb on - strand at 2894.759 kb on + strand at 2894.827 kb on + strand, within CA264_12425 at 2894.827 kb on + strand, within CA264_12425 at 2894.850 kb on + strand, within CA264_12425 at 2894.850 kb on + strand, within CA264_12425 at 2894.850 kb on + strand, within CA264_12425 at 2894.851 kb on - strand, within CA264_12425 at 2894.920 kb on + strand, within CA264_12425 at 2894.922 kb on + strand, within CA264_12425 at 2894.959 kb on - strand, within CA264_12425 at 2894.990 kb on + strand, within CA264_12425 at 2895.014 kb on + strand, within CA264_12425 at 2895.015 kb on - strand at 2895.017 kb on - strand, within CA264_12425 at 2895.017 kb on - strand, within CA264_12425 at 2895.064 kb on + strand, within CA264_12425 at 2895.082 kb on + strand, within CA264_12425 at 2895.085 kb on - strand, within CA264_12425 at 2895.194 kb on + strand, within CA264_12425 at 2895.393 kb on + strand at 2895.393 kb on + strand at 2895.397 kb on - strand at 2895.401 kb on + strand at 2895.401 kb on + strand at 2895.402 kb on - strand at 2895.402 kb on - strand at 2895.402 kb on - strand at 2895.403 kb on + strand at 2895.403 kb on + strand at 2895.405 kb on + strand at 2895.405 kb on + strand at 2895.406 kb on - strand at 2895.406 kb on - strand at 2895.448 kb on + strand at 2895.549 kb on - strand, within CA264_12430 at 2895.571 kb on - strand, within CA264_12430 at 2895.575 kb on + strand, within CA264_12430 at 2895.594 kb on - strand, within CA264_12430 at 2895.600 kb on + strand, within CA264_12430 at 2895.600 kb on + strand, within CA264_12430 at 2895.600 kb on + strand, within CA264_12430 at 2895.602 kb on + strand, within CA264_12430 at 2895.602 kb on + strand, within CA264_12430 at 2895.602 kb on + strand, within CA264_12430 at 2895.603 kb on - strand, within CA264_12430 at 2895.664 kb on + strand, within CA264_12430 at 2895.670 kb on + strand, within CA264_12430 at 2895.750 kb on + strand, within CA264_12430 at 2895.750 kb on + strand, within CA264_12430 at 2895.754 kb on + strand, within CA264_12430 at 2895.782 kb on + strand at 2895.803 kb on - strand, within CA264_12430 at 2895.807 kb on + strand, within CA264_12430 at 2895.825 kb on + strand, within CA264_12430 at 2895.851 kb on + strand, within CA264_12430 at 2895.856 kb on + strand, within CA264_12430 at 2895.876 kb on + strand, within CA264_12430 at 2895.890 kb on + strand, within CA264_12430 at 2895.890 kb on + strand at 2895.952 kb on + strand, within CA264_12430 at 2895.960 kb on + strand, within CA264_12430 at 2895.960 kb on + strand, within CA264_12430 at 2895.960 kb on + strand, within CA264_12430 at 2895.961 kb on - strand, within CA264_12430 at 2896.017 kb on + strand, within CA264_12430 at 2896.018 kb on - strand, within CA264_12430 at 2896.020 kb on + strand, within CA264_12430 at 2896.085 kb on + strand, within CA264_12430 at 2896.194 kb on + strand, within CA264_12430 at 2896.194 kb on + strand, within CA264_12430 at 2896.196 kb on + strand, within CA264_12430 at 2896.240 kb on - strand, within CA264_12430 at 2896.243 kb on + strand, within CA264_12430 at 2896.244 kb on - strand, within CA264_12430 at 2896.246 kb on + strand, within CA264_12430 at 2896.246 kb on + strand, within CA264_12430 at 2896.284 kb on + strand, within CA264_12430 at 2896.286 kb on - strand, within CA264_12430 at 2896.286 kb on - strand, within CA264_12430 at 2896.331 kb on - strand at 2896.343 kb on - strand at 2896.367 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 2,893,785 - CA264_12420 0.51 -2.5 2,893,851 + CA264_12420 0.55 -1.1 2,894,167 - CA264_12420 0.73 +0.2 2,894,181 + CA264_12420 0.74 -1.6 2,894,181 + +0.4 2,894,292 + CA264_12420 0.80 -0.6 2,894,338 - CA264_12420 0.83 +0.8 2,894,340 + CA264_12420 0.83 -0.4 2,894,446 + CA264_12420 0.89 -1.3 2,894,479 - -0.1 2,894,549 - -1.1 2,894,759 + -1.2 2,894,827 + CA264_12425 0.18 -0.2 2,894,827 + CA264_12425 0.18 -1.4 2,894,850 + CA264_12425 0.22 -1.1 2,894,850 + CA264_12425 0.22 -1.2 2,894,850 + CA264_12425 0.22 -1.0 2,894,851 - CA264_12425 0.22 -1.3 2,894,920 + CA264_12425 0.32 +1.8 2,894,922 + CA264_12425 0.32 -0.6 2,894,959 - CA264_12425 0.38 -1.9 2,894,990 + CA264_12425 0.42 +0.1 2,895,014 + CA264_12425 0.46 -0.9 2,895,015 - +0.8 2,895,017 - CA264_12425 0.46 -1.3 2,895,017 - CA264_12425 0.46 -0.6 2,895,064 + CA264_12425 0.53 -0.4 2,895,082 + CA264_12425 0.56 -1.1 2,895,085 - CA264_12425 0.56 -1.1 2,895,194 + CA264_12425 0.72 +1.8 2,895,393 + +0.1 2,895,393 + +0.6 2,895,397 - +0.5 2,895,401 + -1.1 2,895,401 + +0.4 2,895,402 - -0.7 2,895,402 - +2.8 2,895,402 - -1.4 2,895,403 + -2.8 2,895,403 + -1.2 2,895,405 + +0.6 2,895,405 + -0.5 2,895,406 - +0.1 2,895,406 - -0.7 2,895,448 + +1.2 2,895,549 - CA264_12430 0.16 -1.8 2,895,571 - CA264_12430 0.18 -1.1 2,895,575 + CA264_12430 0.18 -1.9 2,895,594 - CA264_12430 0.20 -1.4 2,895,600 + CA264_12430 0.21 -0.9 2,895,600 + CA264_12430 0.21 +0.2 2,895,600 + CA264_12430 0.21 -1.1 2,895,602 + CA264_12430 0.21 -0.8 2,895,602 + CA264_12430 0.21 -1.4 2,895,602 + CA264_12430 0.21 +0.3 2,895,603 - CA264_12430 0.21 -0.9 2,895,664 + CA264_12430 0.27 +0.4 2,895,670 + CA264_12430 0.27 +0.5 2,895,750 + CA264_12430 0.35 -1.6 2,895,750 + CA264_12430 0.35 +0.5 2,895,754 + CA264_12430 0.35 +0.6 2,895,782 + +0.2 2,895,803 - CA264_12430 0.40 -1.2 2,895,807 + CA264_12430 0.40 -0.8 2,895,825 + CA264_12430 0.42 -0.7 2,895,851 + CA264_12430 0.45 -0.8 2,895,856 + CA264_12430 0.45 -0.2 2,895,876 + CA264_12430 0.47 -2.8 2,895,890 + CA264_12430 0.48 -0.4 2,895,890 + +1.4 2,895,952 + CA264_12430 0.54 +0.4 2,895,960 + CA264_12430 0.55 -0.1 2,895,960 + CA264_12430 0.55 +0.4 2,895,960 + CA264_12430 0.55 +0.6 2,895,961 - CA264_12430 0.55 +0.6 2,896,017 + CA264_12430 0.60 -1.6 2,896,018 - CA264_12430 0.60 -0.2 2,896,020 + CA264_12430 0.61 -0.1 2,896,085 + CA264_12430 0.67 -0.1 2,896,194 + CA264_12430 0.77 -1.2 2,896,194 + CA264_12430 0.77 -1.5 2,896,196 + CA264_12430 0.77 +0.4 2,896,240 - CA264_12430 0.82 -0.4 2,896,243 + CA264_12430 0.82 -1.4 2,896,244 - CA264_12430 0.82 -0.9 2,896,246 + CA264_12430 0.82 -1.0 2,896,246 + CA264_12430 0.82 -0.1 2,896,284 + CA264_12430 0.86 -1.3 2,896,286 - CA264_12430 0.86 +0.5 2,896,286 - CA264_12430 0.86 +0.2 2,896,331 - -0.9 2,896,343 - +1.7 2,896,367 - -0.6
Or see this region's nucleotide sequence