Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12000 and CA264_12005 are separated by 56 nucleotides CA264_12005 and CA264_12010 are separated by 241 nucleotides
CA264_12000: CA264_12000 - MBL fold metallo-hydrolase, at 2,786,523 to 2,787,620
_12000
CA264_12005: CA264_12005 - hypothetical protein, at 2,787,677 to 2,787,865
_12005
CA264_12010: CA264_12010 - ATP-binding protein, at 2,788,107 to 2,788,841
_12010
Position (kb)
2787
2788 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2786.743 kb on + strand, within CA264_12000 at 2786.744 kb on - strand, within CA264_12000 at 2786.744 kb on - strand, within CA264_12000 at 2786.744 kb on - strand, within CA264_12000 at 2786.815 kb on - strand, within CA264_12000 at 2786.838 kb on + strand, within CA264_12000 at 2786.838 kb on + strand, within CA264_12000 at 2786.839 kb on - strand, within CA264_12000 at 2786.839 kb on - strand, within CA264_12000 at 2786.840 kb on + strand, within CA264_12000 at 2786.882 kb on - strand, within CA264_12000 at 2786.901 kb on + strand, within CA264_12000 at 2786.902 kb on - strand, within CA264_12000 at 2786.902 kb on - strand, within CA264_12000 at 2786.902 kb on - strand, within CA264_12000 at 2786.902 kb on - strand, within CA264_12000 at 2786.930 kb on + strand, within CA264_12000 at 2786.939 kb on + strand, within CA264_12000 at 2787.137 kb on - strand, within CA264_12000 at 2787.154 kb on - strand, within CA264_12000 at 2787.158 kb on + strand, within CA264_12000 at 2787.159 kb on - strand, within CA264_12000 at 2787.201 kb on + strand, within CA264_12000 at 2787.327 kb on + strand, within CA264_12000 at 2787.327 kb on + strand, within CA264_12000 at 2787.330 kb on - strand, within CA264_12000 at 2787.331 kb on + strand, within CA264_12000 at 2787.332 kb on - strand, within CA264_12000 at 2787.433 kb on + strand, within CA264_12000 at 2787.475 kb on - strand, within CA264_12000 at 2787.572 kb on - strand at 2787.612 kb on + strand at 2787.675 kb on - strand at 2787.740 kb on + strand, within CA264_12005 at 2787.741 kb on - strand, within CA264_12005 at 2787.780 kb on - strand, within CA264_12005 at 2787.809 kb on - strand, within CA264_12005 at 2787.839 kb on - strand, within CA264_12005 at 2787.870 kb on + strand at 2787.870 kb on + strand at 2787.871 kb on - strand at 2787.910 kb on - strand at 2787.927 kb on - strand at 2787.927 kb on - strand at 2787.983 kb on + strand at 2788.081 kb on + strand at 2788.192 kb on - strand, within CA264_12010 at 2788.240 kb on + strand, within CA264_12010 at 2788.240 kb on + strand, within CA264_12010 at 2788.240 kb on + strand, within CA264_12010 at 2788.241 kb on - strand, within CA264_12010 at 2788.241 kb on - strand, within CA264_12010 at 2788.349 kb on + strand, within CA264_12010 at 2788.350 kb on - strand, within CA264_12010 at 2788.379 kb on - strand, within CA264_12010 at 2788.379 kb on - strand, within CA264_12010 at 2788.526 kb on + strand, within CA264_12010 at 2788.715 kb on + strand, within CA264_12010 at 2788.716 kb on - strand, within CA264_12010 at 2788.842 kb on + strand at 2788.843 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 2,786,743 + CA264_12000 0.20 +1.4 2,786,744 - CA264_12000 0.20 +0.0 2,786,744 - CA264_12000 0.20 -1.0 2,786,744 - CA264_12000 0.20 -0.2 2,786,815 - CA264_12000 0.27 +0.7 2,786,838 + CA264_12000 0.29 -0.2 2,786,838 + CA264_12000 0.29 +0.6 2,786,839 - CA264_12000 0.29 +0.6 2,786,839 - CA264_12000 0.29 -1.6 2,786,840 + CA264_12000 0.29 -2.1 2,786,882 - CA264_12000 0.33 +2.5 2,786,901 + CA264_12000 0.34 -0.8 2,786,902 - CA264_12000 0.35 -0.6 2,786,902 - CA264_12000 0.35 +0.2 2,786,902 - CA264_12000 0.35 +0.6 2,786,902 - CA264_12000 0.35 -1.3 2,786,930 + CA264_12000 0.37 +0.8 2,786,939 + CA264_12000 0.38 -1.1 2,787,137 - CA264_12000 0.56 -1.1 2,787,154 - CA264_12000 0.57 -0.1 2,787,158 + CA264_12000 0.58 -1.3 2,787,159 - CA264_12000 0.58 -2.3 2,787,201 + CA264_12000 0.62 -0.1 2,787,327 + CA264_12000 0.73 +0.7 2,787,327 + CA264_12000 0.73 -0.3 2,787,330 - CA264_12000 0.73 -1.0 2,787,331 + CA264_12000 0.74 -0.9 2,787,332 - CA264_12000 0.74 +0.2 2,787,433 + CA264_12000 0.83 -0.4 2,787,475 - CA264_12000 0.87 +0.0 2,787,572 - -1.1 2,787,612 + +0.1 2,787,675 - +0.3 2,787,740 + CA264_12005 0.33 -1.2 2,787,741 - CA264_12005 0.34 -1.3 2,787,780 - CA264_12005 0.54 -2.5 2,787,809 - CA264_12005 0.70 -0.6 2,787,839 - CA264_12005 0.86 +1.4 2,787,870 + -0.3 2,787,870 + +1.4 2,787,871 - -0.5 2,787,910 - -0.4 2,787,927 - -0.3 2,787,927 - -0.7 2,787,983 + -1.2 2,788,081 + +0.2 2,788,192 - CA264_12010 0.12 +1.4 2,788,240 + CA264_12010 0.18 -0.2 2,788,240 + CA264_12010 0.18 -0.4 2,788,240 + CA264_12010 0.18 -0.5 2,788,241 - CA264_12010 0.18 -0.5 2,788,241 - CA264_12010 0.18 -0.6 2,788,349 + CA264_12010 0.33 +1.9 2,788,350 - CA264_12010 0.33 -0.1 2,788,379 - CA264_12010 0.37 +0.0 2,788,379 - CA264_12010 0.37 -0.5 2,788,526 + CA264_12010 0.57 -0.4 2,788,715 + CA264_12010 0.83 +0.2 2,788,716 - CA264_12010 0.83 +0.3 2,788,842 + +1.1 2,788,843 - -0.7
Or see this region's nucleotide sequence