Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11770 and CA264_11775 are separated by 898 nucleotides CA264_11775 and CA264_11780 are separated by 248 nucleotides CA264_11780 and CA264_11785 are separated by 68 nucleotides CA264_11785 and CA264_11790 are separated by 121 nucleotides
CA264_11770: CA264_11770 - hypothetical protein, at 2,742,741 to 2,744,102
_11770
CA264_11775: CA264_11775 - hypothetical protein, at 2,745,001 to 2,745,228
_11775
CA264_11780: CA264_11780 - tRNA-Arg, at 2,745,477 to 2,745,550
_11780
CA264_11785: CA264_11785 - tRNA-Pro, at 2,745,619 to 2,745,695
_11785
CA264_11790: CA264_11790 - tRNA-Ser, at 2,745,817 to 2,745,903
_11790
Position (kb)
2745
2746 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2744.210 kb on + strand at 2744.211 kb on - strand at 2744.246 kb on + strand at 2744.254 kb on + strand at 2744.264 kb on + strand at 2744.264 kb on + strand at 2744.354 kb on + strand at 2744.356 kb on + strand at 2744.356 kb on + strand at 2744.409 kb on + strand at 2744.410 kb on - strand at 2744.410 kb on - strand at 2744.411 kb on + strand at 2744.412 kb on - strand at 2744.412 kb on - strand at 2744.412 kb on - strand at 2744.412 kb on - strand at 2744.415 kb on - strand at 2744.415 kb on - strand at 2744.430 kb on - strand at 2744.442 kb on - strand at 2744.465 kb on - strand at 2744.485 kb on - strand at 2744.489 kb on + strand at 2744.648 kb on - strand at 2744.669 kb on - strand at 2744.697 kb on + strand at 2744.733 kb on - strand at 2744.733 kb on - strand at 2744.733 kb on - strand at 2744.751 kb on - strand at 2744.751 kb on - strand at 2744.756 kb on + strand at 2744.770 kb on - strand at 2744.770 kb on - strand at 2744.773 kb on - strand at 2744.782 kb on - strand at 2744.796 kb on - strand at 2744.798 kb on - strand at 2744.799 kb on + strand at 2744.799 kb on + strand at 2744.799 kb on + strand at 2744.803 kb on + strand at 2744.803 kb on + strand at 2744.803 kb on + strand at 2744.803 kb on + strand at 2744.803 kb on + strand at 2744.804 kb on - strand at 2744.804 kb on - strand at 2744.804 kb on - strand at 2744.804 kb on - strand at 2744.844 kb on + strand at 2744.890 kb on - strand at 2744.924 kb on + strand at 2744.934 kb on + strand at 2744.954 kb on + strand at 2744.979 kb on + strand at 2744.979 kb on + strand at 2745.000 kb on + strand at 2745.015 kb on - strand at 2745.015 kb on - strand at 2745.018 kb on + strand at 2745.091 kb on + strand, within CA264_11775 at 2745.114 kb on + strand, within CA264_11775 at 2745.115 kb on - strand, within CA264_11775 at 2745.133 kb on + strand, within CA264_11775 at 2745.133 kb on + strand, within CA264_11775 at 2745.134 kb on - strand, within CA264_11775 at 2745.134 kb on - strand, within CA264_11775 at 2745.179 kb on + strand, within CA264_11775 at 2745.180 kb on - strand, within CA264_11775 at 2745.180 kb on - strand, within CA264_11775 at 2745.193 kb on - strand, within CA264_11775 at 2745.244 kb on - strand at 2745.247 kb on + strand at 2745.273 kb on - strand at 2745.273 kb on - strand at 2745.277 kb on + strand at 2745.277 kb on + strand at 2745.282 kb on + strand at 2745.282 kb on + strand at 2745.303 kb on + strand at 2745.303 kb on + strand at 2745.303 kb on + strand at 2745.309 kb on + strand at 2745.309 kb on + strand at 2745.309 kb on + strand at 2745.315 kb on + strand at 2745.315 kb on + strand at 2745.812 kb on + strand at 2745.812 kb on + strand at 2745.813 kb on - strand at 2746.031 kb on - strand at 2746.037 kb on - strand at 2746.100 kb on + strand at 2746.101 kb on - strand at 2746.169 kb on - strand at 2746.169 kb on - strand at 2746.190 kb on + strand at 2746.190 kb on + strand at 2746.190 kb on + strand at 2746.191 kb on - strand at 2746.211 kb on + strand at 2746.211 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 2,744,210 + -0.5 2,744,211 - +0.5 2,744,246 + -0.7 2,744,254 + +1.0 2,744,264 + -0.2 2,744,264 + +0.5 2,744,354 + +0.1 2,744,356 + +0.3 2,744,356 + -1.1 2,744,409 + -0.3 2,744,410 - -1.6 2,744,410 - -1.0 2,744,411 + -0.3 2,744,412 - -1.1 2,744,412 - -0.5 2,744,412 - -0.6 2,744,412 - +0.9 2,744,415 - +0.4 2,744,415 - +0.2 2,744,430 - +0.3 2,744,442 - -0.2 2,744,465 - +0.3 2,744,485 - -1.4 2,744,489 + -0.7 2,744,648 - +1.3 2,744,669 - -0.6 2,744,697 + -1.1 2,744,733 - +0.5 2,744,733 - -1.9 2,744,733 - -0.1 2,744,751 - -0.3 2,744,751 - +0.7 2,744,756 + +0.3 2,744,770 - -2.4 2,744,770 - -0.1 2,744,773 - -0.4 2,744,782 - -0.6 2,744,796 - -0.2 2,744,798 - +0.8 2,744,799 + -0.6 2,744,799 + -0.2 2,744,799 + -1.2 2,744,803 + -0.8 2,744,803 + +0.3 2,744,803 + -0.5 2,744,803 + -0.0 2,744,803 + -0.5 2,744,804 - +0.2 2,744,804 - +0.4 2,744,804 - +1.3 2,744,804 - -0.2 2,744,844 + -0.4 2,744,890 - +0.6 2,744,924 + +0.8 2,744,934 + +0.5 2,744,954 + -0.0 2,744,979 + -1.0 2,744,979 + +0.3 2,745,000 + -1.4 2,745,015 - +0.0 2,745,015 - -1.1 2,745,018 + -0.6 2,745,091 + CA264_11775 0.39 -0.1 2,745,114 + CA264_11775 0.50 +1.4 2,745,115 - CA264_11775 0.50 +0.2 2,745,133 + CA264_11775 0.58 -0.4 2,745,133 + CA264_11775 0.58 +0.7 2,745,134 - CA264_11775 0.58 +0.0 2,745,134 - CA264_11775 0.58 +0.9 2,745,179 + CA264_11775 0.78 +1.0 2,745,180 - CA264_11775 0.79 -0.5 2,745,180 - CA264_11775 0.79 -1.2 2,745,193 - CA264_11775 0.84 +1.2 2,745,244 - -0.8 2,745,247 + -0.7 2,745,273 - -0.7 2,745,273 - +1.2 2,745,277 + +3.0 2,745,277 + -1.4 2,745,282 + -0.7 2,745,282 + +0.2 2,745,303 + -2.2 2,745,303 + +0.1 2,745,303 + -1.0 2,745,309 + +0.2 2,745,309 + -0.1 2,745,309 + -0.9 2,745,315 + +1.0 2,745,315 + -0.2 2,745,812 + -1.6 2,745,812 + -1.5 2,745,813 - +0.6 2,746,031 - -0.1 2,746,037 - +0.4 2,746,100 + -0.6 2,746,101 - -0.7 2,746,169 - -0.4 2,746,169 - +0.9 2,746,190 + -0.2 2,746,190 + +0.8 2,746,190 + -0.1 2,746,191 - -0.3 2,746,211 + +0.2 2,746,211 + +0.0
Or see this region's nucleotide sequence