Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11635 and CA264_11640 are separated by 161 nucleotides CA264_11640 and CA264_11645 are separated by 97 nucleotides CA264_11645 and CA264_11650 are separated by 368 nucleotides
CA264_11635: CA264_11635 - hypothetical protein, at 2,713,615 to 2,714,991
_11635
CA264_11640: CA264_11640 - hypothetical protein, at 2,715,153 to 2,715,608
_11640
CA264_11645: CA264_11645 - peptidase, at 2,715,706 to 2,717,505
_11645
CA264_11650: CA264_11650 - hypothetical protein, at 2,717,874 to 2,718,308
_11650
Position (kb)
2715
2716
2717
2718 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2714.718 kb on - strand, within CA264_11635 at 2714.724 kb on + strand, within CA264_11635 at 2714.724 kb on + strand, within CA264_11635 at 2714.725 kb on - strand, within CA264_11635 at 2714.725 kb on - strand, within CA264_11635 at 2714.786 kb on + strand, within CA264_11635 at 2714.787 kb on - strand, within CA264_11635 at 2714.787 kb on - strand, within CA264_11635 at 2714.789 kb on + strand, within CA264_11635 at 2714.789 kb on + strand, within CA264_11635 at 2714.790 kb on - strand, within CA264_11635 at 2714.798 kb on - strand, within CA264_11635 at 2714.880 kb on - strand at 2714.909 kb on - strand at 2714.946 kb on + strand at 2715.036 kb on + strand at 2715.036 kb on + strand at 2715.126 kb on - strand at 2715.164 kb on + strand at 2715.251 kb on + strand, within CA264_11640 at 2715.271 kb on - strand, within CA264_11640 at 2715.308 kb on - strand, within CA264_11640 at 2715.308 kb on - strand, within CA264_11640 at 2715.424 kb on - strand, within CA264_11640 at 2715.441 kb on - strand, within CA264_11640 at 2715.480 kb on + strand, within CA264_11640 at 2715.480 kb on + strand, within CA264_11640 at 2715.486 kb on + strand, within CA264_11640 at 2715.489 kb on - strand, within CA264_11640 at 2715.566 kb on + strand at 2715.598 kb on + strand at 2715.606 kb on + strand at 2715.644 kb on - strand at 2715.644 kb on - strand at 2715.644 kb on - strand at 2715.663 kb on + strand at 2715.789 kb on - strand at 2715.794 kb on - strand at 2715.870 kb on + strand at 2715.870 kb on + strand at 2715.873 kb on + strand at 2715.873 kb on + strand at 2715.873 kb on + strand at 2715.874 kb on - strand at 2715.874 kb on - strand at 2715.907 kb on + strand, within CA264_11645 at 2715.908 kb on - strand, within CA264_11645 at 2715.989 kb on + strand, within CA264_11645 at 2715.990 kb on - strand, within CA264_11645 at 2716.012 kb on - strand, within CA264_11645 at 2716.065 kb on + strand, within CA264_11645 at 2716.088 kb on + strand, within CA264_11645 at 2716.090 kb on + strand, within CA264_11645 at 2716.091 kb on - strand, within CA264_11645 at 2716.091 kb on - strand, within CA264_11645 at 2716.191 kb on + strand, within CA264_11645 at 2716.233 kb on - strand, within CA264_11645 at 2716.253 kb on - strand, within CA264_11645 at 2716.255 kb on + strand, within CA264_11645 at 2716.256 kb on - strand, within CA264_11645 at 2716.281 kb on - strand, within CA264_11645 at 2716.281 kb on - strand, within CA264_11645 at 2716.281 kb on - strand, within CA264_11645 at 2716.281 kb on - strand, within CA264_11645 at 2716.296 kb on - strand, within CA264_11645 at 2716.326 kb on + strand, within CA264_11645 at 2716.327 kb on - strand, within CA264_11645 at 2716.346 kb on + strand, within CA264_11645 at 2716.347 kb on - strand, within CA264_11645 at 2716.354 kb on + strand, within CA264_11645 at 2716.355 kb on - strand, within CA264_11645 at 2716.355 kb on - strand, within CA264_11645 at 2716.355 kb on - strand, within CA264_11645 at 2716.376 kb on + strand, within CA264_11645 at 2716.404 kb on + strand, within CA264_11645 at 2716.405 kb on - strand, within CA264_11645 at 2716.405 kb on - strand, within CA264_11645 at 2716.463 kb on - strand, within CA264_11645 at 2716.474 kb on + strand, within CA264_11645 at 2716.474 kb on + strand, within CA264_11645 at 2716.531 kb on - strand, within CA264_11645 at 2716.535 kb on - strand, within CA264_11645 at 2716.557 kb on + strand, within CA264_11645 at 2716.558 kb on - strand, within CA264_11645 at 2716.561 kb on + strand, within CA264_11645 at 2716.561 kb on + strand, within CA264_11645 at 2716.562 kb on - strand, within CA264_11645 at 2716.562 kb on - strand, within CA264_11645 at 2716.562 kb on - strand, within CA264_11645 at 2716.620 kb on + strand, within CA264_11645 at 2716.620 kb on + strand, within CA264_11645 at 2716.621 kb on - strand, within CA264_11645 at 2716.650 kb on + strand, within CA264_11645 at 2716.650 kb on + strand, within CA264_11645 at 2716.660 kb on - strand, within CA264_11645 at 2716.660 kb on - strand, within CA264_11645 at 2716.759 kb on + strand, within CA264_11645 at 2716.770 kb on + strand, within CA264_11645 at 2716.770 kb on + strand, within CA264_11645 at 2716.814 kb on - strand, within CA264_11645 at 2716.836 kb on + strand, within CA264_11645 at 2716.837 kb on - strand, within CA264_11645 at 2716.837 kb on - strand, within CA264_11645 at 2716.843 kb on + strand, within CA264_11645 at 2716.844 kb on - strand, within CA264_11645 at 2716.845 kb on + strand, within CA264_11645 at 2716.846 kb on - strand, within CA264_11645 at 2716.846 kb on - strand, within CA264_11645 at 2716.867 kb on + strand, within CA264_11645 at 2716.868 kb on - strand, within CA264_11645 at 2716.873 kb on - strand, within CA264_11645 at 2716.875 kb on + strand, within CA264_11645 at 2716.875 kb on + strand, within CA264_11645 at 2716.925 kb on + strand, within CA264_11645 at 2717.044 kb on + strand, within CA264_11645 at 2717.044 kb on + strand, within CA264_11645 at 2717.075 kb on - strand, within CA264_11645 at 2717.118 kb on + strand, within CA264_11645 at 2717.134 kb on + strand, within CA264_11645 at 2717.171 kb on - strand, within CA264_11645 at 2717.193 kb on - strand, within CA264_11645 at 2717.206 kb on - strand, within CA264_11645 at 2717.207 kb on + strand, within CA264_11645 at 2717.222 kb on + strand, within CA264_11645 at 2717.285 kb on + strand, within CA264_11645 at 2717.292 kb on - strand, within CA264_11645 at 2717.319 kb on + strand, within CA264_11645 at 2717.382 kb on + strand at 2717.394 kb on - strand at 2717.394 kb on - strand at 2717.401 kb on - strand at 2717.444 kb on + strand at 2717.496 kb on + strand at 2717.497 kb on - strand at 2717.497 kb on - strand at 2717.502 kb on - strand at 2717.502 kb on - strand at 2717.502 kb on - strand at 2717.506 kb on + strand at 2717.506 kb on + strand at 2717.510 kb on - strand at 2717.581 kb on - strand at 2717.595 kb on + strand at 2717.595 kb on + strand at 2717.605 kb on + strand at 2717.606 kb on - strand at 2717.606 kb on - strand at 2717.611 kb on + strand at 2717.621 kb on - strand at 2717.683 kb on + strand at 2717.684 kb on - strand at 2717.696 kb on + strand at 2717.749 kb on + strand at 2717.750 kb on - strand at 2717.763 kb on + strand at 2717.770 kb on + strand at 2717.776 kb on - strand at 2717.790 kb on - strand at 2717.875 kb on + strand at 2717.898 kb on + strand at 2717.900 kb on + strand at 2717.900 kb on + strand at 2717.901 kb on - strand at 2717.920 kb on - strand, within CA264_11650 at 2717.920 kb on - strand, within CA264_11650 at 2717.921 kb on + strand, within CA264_11650 at 2717.941 kb on + strand, within CA264_11650 at 2718.003 kb on + strand, within CA264_11650 at 2718.066 kb on + strand, within CA264_11650 at 2718.067 kb on - strand, within CA264_11650 at 2718.075 kb on + strand, within CA264_11650 at 2718.075 kb on + strand, within CA264_11650 at 2718.075 kb on + strand, within CA264_11650 at 2718.075 kb on + strand, within CA264_11650 at 2718.076 kb on - strand, within CA264_11650 at 2718.181 kb on - strand, within CA264_11650 at 2718.200 kb on + strand, within CA264_11650 at 2718.219 kb on + strand, within CA264_11650 at 2718.230 kb on + strand, within CA264_11650 at 2718.240 kb on - strand, within CA264_11650 at 2718.240 kb on - strand, within CA264_11650 at 2718.253 kb on - strand, within CA264_11650 at 2718.276 kb on + strand at 2718.297 kb on - strand at 2718.320 kb on + strand at 2718.329 kb on - strand at 2718.332 kb on + strand at 2718.373 kb on - strand at 2718.373 kb on - strand at 2718.431 kb on + strand at 2718.464 kb on + strand at 2718.464 kb on + strand at 2718.484 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 2,714,718 - CA264_11635 0.80 -1.3 2,714,724 + CA264_11635 0.81 -1.6 2,714,724 + CA264_11635 0.81 +0.9 2,714,725 - CA264_11635 0.81 -1.0 2,714,725 - CA264_11635 0.81 +2.2 2,714,786 + CA264_11635 0.85 -0.7 2,714,787 - CA264_11635 0.85 -0.7 2,714,787 - CA264_11635 0.85 -0.7 2,714,789 + CA264_11635 0.85 -0.7 2,714,789 + CA264_11635 0.85 +0.5 2,714,790 - CA264_11635 0.85 -1.5 2,714,798 - CA264_11635 0.86 -0.3 2,714,880 - -1.5 2,714,909 - +1.4 2,714,946 + -0.3 2,715,036 + -0.7 2,715,036 + -1.3 2,715,126 - -1.5 2,715,164 + +0.6 2,715,251 + CA264_11640 0.21 -0.0 2,715,271 - CA264_11640 0.26 -0.8 2,715,308 - CA264_11640 0.34 +0.1 2,715,308 - CA264_11640 0.34 +0.1 2,715,424 - CA264_11640 0.59 -0.9 2,715,441 - CA264_11640 0.63 -1.9 2,715,480 + CA264_11640 0.72 +0.2 2,715,480 + CA264_11640 0.72 -1.0 2,715,486 + CA264_11640 0.73 -0.8 2,715,489 - CA264_11640 0.74 -0.0 2,715,566 + -0.5 2,715,598 + -2.1 2,715,606 + +0.2 2,715,644 - -0.2 2,715,644 - +0.5 2,715,644 - -0.6 2,715,663 + +1.2 2,715,789 - +0.0 2,715,794 - -0.6 2,715,870 + -0.4 2,715,870 + +0.5 2,715,873 + +0.5 2,715,873 + -0.6 2,715,873 + -0.4 2,715,874 - +0.5 2,715,874 - -0.7 2,715,907 + CA264_11645 0.11 -1.0 2,715,908 - CA264_11645 0.11 -1.0 2,715,989 + CA264_11645 0.16 -1.2 2,715,990 - CA264_11645 0.16 -0.2 2,716,012 - CA264_11645 0.17 +2.1 2,716,065 + CA264_11645 0.20 -3.5 2,716,088 + CA264_11645 0.21 -0.6 2,716,090 + CA264_11645 0.21 -1.8 2,716,091 - CA264_11645 0.21 -0.5 2,716,091 - CA264_11645 0.21 -0.3 2,716,191 + CA264_11645 0.27 -0.5 2,716,233 - CA264_11645 0.29 +1.8 2,716,253 - CA264_11645 0.30 -0.9 2,716,255 + CA264_11645 0.30 -0.7 2,716,256 - CA264_11645 0.31 +0.0 2,716,281 - CA264_11645 0.32 +2.0 2,716,281 - CA264_11645 0.32 -1.3 2,716,281 - CA264_11645 0.32 +0.4 2,716,281 - CA264_11645 0.32 +1.3 2,716,296 - CA264_11645 0.33 -0.5 2,716,326 + CA264_11645 0.34 -0.3 2,716,327 - CA264_11645 0.34 +0.3 2,716,346 + CA264_11645 0.36 +0.7 2,716,347 - CA264_11645 0.36 -0.7 2,716,354 + CA264_11645 0.36 +1.0 2,716,355 - CA264_11645 0.36 -1.7 2,716,355 - CA264_11645 0.36 -0.5 2,716,355 - CA264_11645 0.36 -0.7 2,716,376 + CA264_11645 0.37 -0.8 2,716,404 + CA264_11645 0.39 +0.2 2,716,405 - CA264_11645 0.39 -0.2 2,716,405 - CA264_11645 0.39 -1.2 2,716,463 - CA264_11645 0.42 -0.6 2,716,474 + CA264_11645 0.43 -1.2 2,716,474 + CA264_11645 0.43 -1.1 2,716,531 - CA264_11645 0.46 +0.5 2,716,535 - CA264_11645 0.46 -0.3 2,716,557 + CA264_11645 0.47 -0.3 2,716,558 - CA264_11645 0.47 -1.0 2,716,561 + CA264_11645 0.47 -0.9 2,716,561 + CA264_11645 0.47 -1.2 2,716,562 - CA264_11645 0.48 +0.3 2,716,562 - CA264_11645 0.48 +0.7 2,716,562 - CA264_11645 0.48 +0.3 2,716,620 + CA264_11645 0.51 -0.9 2,716,620 + CA264_11645 0.51 -0.9 2,716,621 - CA264_11645 0.51 -1.1 2,716,650 + CA264_11645 0.52 -0.9 2,716,650 + CA264_11645 0.52 -0.2 2,716,660 - CA264_11645 0.53 -0.2 2,716,660 - CA264_11645 0.53 -0.7 2,716,759 + CA264_11645 0.58 -0.4 2,716,770 + CA264_11645 0.59 -0.8 2,716,770 + CA264_11645 0.59 +0.7 2,716,814 - CA264_11645 0.62 +0.7 2,716,836 + CA264_11645 0.63 -0.2 2,716,837 - CA264_11645 0.63 -0.1 2,716,837 - CA264_11645 0.63 +0.0 2,716,843 + CA264_11645 0.63 -0.8 2,716,844 - CA264_11645 0.63 -0.1 2,716,845 + CA264_11645 0.63 -0.1 2,716,846 - CA264_11645 0.63 +1.4 2,716,846 - CA264_11645 0.63 -0.4 2,716,867 + CA264_11645 0.65 -1.1 2,716,868 - CA264_11645 0.65 -1.2 2,716,873 - CA264_11645 0.65 -1.0 2,716,875 + CA264_11645 0.65 -0.5 2,716,875 + CA264_11645 0.65 -0.1 2,716,925 + CA264_11645 0.68 +0.1 2,717,044 + CA264_11645 0.74 +0.6 2,717,044 + CA264_11645 0.74 -1.1 2,717,075 - CA264_11645 0.76 +0.1 2,717,118 + CA264_11645 0.78 -1.7 2,717,134 + CA264_11645 0.79 -0.4 2,717,171 - CA264_11645 0.81 +0.5 2,717,193 - CA264_11645 0.83 -0.1 2,717,206 - CA264_11645 0.83 -1.7 2,717,207 + CA264_11645 0.83 -0.0 2,717,222 + CA264_11645 0.84 -0.3 2,717,285 + CA264_11645 0.88 -0.4 2,717,292 - CA264_11645 0.88 -1.2 2,717,319 + CA264_11645 0.90 -0.3 2,717,382 + +0.3 2,717,394 - -1.6 2,717,394 - -1.6 2,717,401 - +0.3 2,717,444 + -0.1 2,717,496 + -0.5 2,717,497 - -0.3 2,717,497 - +0.7 2,717,502 - +1.8 2,717,502 - -1.2 2,717,502 - -0.8 2,717,506 + +0.3 2,717,506 + -1.9 2,717,510 - -0.4 2,717,581 - -0.9 2,717,595 + +0.2 2,717,595 + -2.0 2,717,605 + -0.1 2,717,606 - -0.2 2,717,606 - -0.4 2,717,611 + -1.2 2,717,621 - +0.8 2,717,683 + -1.2 2,717,684 - -0.2 2,717,696 + -0.8 2,717,749 + -0.6 2,717,750 - -0.9 2,717,763 + -1.8 2,717,770 + -0.4 2,717,776 - -0.6 2,717,790 - -0.7 2,717,875 + -1.8 2,717,898 + +0.2 2,717,900 + -1.2 2,717,900 + +0.3 2,717,901 - -0.2 2,717,920 - CA264_11650 0.11 -0.3 2,717,920 - CA264_11650 0.11 +0.1 2,717,921 + CA264_11650 0.11 +2.4 2,717,941 + CA264_11650 0.15 -1.2 2,718,003 + CA264_11650 0.30 +1.5 2,718,066 + CA264_11650 0.44 +2.0 2,718,067 - CA264_11650 0.44 +0.9 2,718,075 + CA264_11650 0.46 +0.2 2,718,075 + CA264_11650 0.46 -1.0 2,718,075 + CA264_11650 0.46 +1.3 2,718,075 + CA264_11650 0.46 +1.1 2,718,076 - CA264_11650 0.46 -1.4 2,718,181 - CA264_11650 0.71 +0.2 2,718,200 + CA264_11650 0.75 -0.4 2,718,219 + CA264_11650 0.79 -0.7 2,718,230 + CA264_11650 0.82 -2.3 2,718,240 - CA264_11650 0.84 +0.4 2,718,240 - CA264_11650 0.84 +0.7 2,718,253 - CA264_11650 0.87 -1.5 2,718,276 + +0.1 2,718,297 - +1.0 2,718,320 + -0.3 2,718,329 - -0.2 2,718,332 + +0.7 2,718,373 - -1.2 2,718,373 - -0.8 2,718,431 + -0.7 2,718,464 + -0.5 2,718,464 + -0.2 2,718,484 + +0.0
Or see this region's nucleotide sequence