Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11395 and CA264_11400 are separated by 545 nucleotides CA264_11400 and CA264_11405 are separated by 93 nucleotides
CA264_11395: CA264_11395 - hypothetical protein, at 2,639,678 to 2,640,880
_11395
CA264_11400: CA264_11400 - alkaline phosphatase, at 2,641,426 to 2,643,105
_11400
CA264_11405: CA264_11405 - glycerophosphodiester phosphodiesterase, at 2,643,199 to 2,644,098
_11405
Position (kb)
2641
2642
2643
2644 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2640.444 kb on - strand, within CA264_11395 at 2640.475 kb on + strand, within CA264_11395 at 2640.478 kb on - strand, within CA264_11395 at 2640.492 kb on - strand, within CA264_11395 at 2640.492 kb on - strand, within CA264_11395 at 2640.492 kb on - strand, within CA264_11395 at 2640.512 kb on - strand, within CA264_11395 at 2640.512 kb on - strand, within CA264_11395 at 2640.537 kb on + strand, within CA264_11395 at 2640.662 kb on - strand, within CA264_11395 at 2640.713 kb on - strand, within CA264_11395 at 2640.714 kb on + strand, within CA264_11395 at 2640.788 kb on - strand at 2640.788 kb on - strand at 2640.788 kb on - strand at 2640.795 kb on - strand at 2640.812 kb on - strand at 2640.920 kb on - strand at 2640.923 kb on + strand at 2640.924 kb on - strand at 2640.938 kb on - strand at 2640.942 kb on + strand at 2640.956 kb on - strand at 2640.963 kb on + strand at 2640.963 kb on + strand at 2640.966 kb on + strand at 2640.966 kb on + strand at 2640.967 kb on - strand at 2640.985 kb on + strand at 2640.986 kb on - strand at 2640.996 kb on + strand at 2640.997 kb on - strand at 2640.997 kb on - strand at 2640.997 kb on - strand at 2640.997 kb on - strand at 2641.000 kb on + strand at 2641.001 kb on - strand at 2641.001 kb on - strand at 2641.001 kb on - strand at 2641.050 kb on - strand at 2641.071 kb on + strand at 2641.082 kb on + strand at 2641.083 kb on - strand at 2641.088 kb on - strand at 2641.088 kb on - strand at 2641.105 kb on + strand at 2641.106 kb on - strand at 2641.199 kb on - strand at 2641.202 kb on + strand at 2641.214 kb on + strand at 2641.222 kb on + strand at 2641.257 kb on + strand at 2641.257 kb on + strand at 2641.356 kb on + strand at 2641.374 kb on - strand at 2641.375 kb on + strand at 2641.375 kb on + strand at 2641.376 kb on - strand at 2641.422 kb on - strand at 2641.432 kb on + strand at 2641.433 kb on - strand at 2641.458 kb on + strand at 2641.476 kb on + strand at 2641.476 kb on + strand at 2641.476 kb on + strand at 2641.477 kb on - strand at 2641.480 kb on - strand at 2641.488 kb on + strand at 2641.489 kb on - strand at 2641.489 kb on - strand at 2641.549 kb on + strand at 2641.585 kb on - strand at 2641.589 kb on + strand at 2641.590 kb on - strand at 2641.590 kb on - strand at 2641.596 kb on - strand, within CA264_11400 at 2641.655 kb on - strand, within CA264_11400 at 2641.655 kb on - strand, within CA264_11400 at 2641.660 kb on + strand, within CA264_11400 at 2641.660 kb on + strand, within CA264_11400 at 2641.660 kb on + strand, within CA264_11400 at 2641.661 kb on - strand, within CA264_11400 at 2641.661 kb on - strand, within CA264_11400 at 2641.680 kb on - strand, within CA264_11400 at 2641.686 kb on - strand, within CA264_11400 at 2641.750 kb on - strand, within CA264_11400 at 2641.751 kb on + strand, within CA264_11400 at 2641.752 kb on - strand, within CA264_11400 at 2641.771 kb on + strand, within CA264_11400 at 2641.772 kb on - strand, within CA264_11400 at 2641.772 kb on - strand, within CA264_11400 at 2641.853 kb on + strand, within CA264_11400 at 2641.874 kb on + strand, within CA264_11400 at 2641.875 kb on - strand, within CA264_11400 at 2641.952 kb on + strand, within CA264_11400 at 2641.969 kb on - strand, within CA264_11400 at 2641.969 kb on - strand, within CA264_11400 at 2641.971 kb on + strand, within CA264_11400 at 2641.982 kb on + strand, within CA264_11400 at 2642.031 kb on - strand, within CA264_11400 at 2642.031 kb on - strand, within CA264_11400 at 2642.050 kb on - strand, within CA264_11400 at 2642.050 kb on - strand, within CA264_11400 at 2642.050 kb on - strand, within CA264_11400 at 2642.079 kb on + strand, within CA264_11400 at 2642.099 kb on + strand, within CA264_11400 at 2642.099 kb on + strand, within CA264_11400 at 2642.100 kb on - strand, within CA264_11400 at 2642.100 kb on - strand, within CA264_11400 at 2642.100 kb on - strand, within CA264_11400 at 2642.100 kb on - strand, within CA264_11400 at 2642.202 kb on + strand, within CA264_11400 at 2642.262 kb on + strand, within CA264_11400 at 2642.272 kb on + strand, within CA264_11400 at 2642.273 kb on - strand, within CA264_11400 at 2642.280 kb on - strand, within CA264_11400 at 2642.313 kb on + strand, within CA264_11400 at 2642.313 kb on + strand, within CA264_11400 at 2642.314 kb on - strand, within CA264_11400 at 2642.314 kb on - strand, within CA264_11400 at 2642.381 kb on + strand, within CA264_11400 at 2642.399 kb on - strand, within CA264_11400 at 2642.399 kb on - strand, within CA264_11400 at 2642.423 kb on + strand, within CA264_11400 at 2642.424 kb on - strand, within CA264_11400 at 2642.448 kb on + strand, within CA264_11400 at 2642.479 kb on + strand, within CA264_11400 at 2642.481 kb on + strand, within CA264_11400 at 2642.482 kb on - strand, within CA264_11400 at 2642.482 kb on - strand, within CA264_11400 at 2642.482 kb on - strand, within CA264_11400 at 2642.483 kb on + strand, within CA264_11400 at 2642.483 kb on + strand, within CA264_11400 at 2642.483 kb on + strand, within CA264_11400 at 2642.484 kb on - strand, within CA264_11400 at 2642.486 kb on + strand, within CA264_11400 at 2642.486 kb on + strand, within CA264_11400 at 2642.487 kb on - strand, within CA264_11400 at 2642.529 kb on - strand, within CA264_11400 at 2642.593 kb on + strand, within CA264_11400 at 2642.594 kb on - strand, within CA264_11400 at 2642.613 kb on + strand, within CA264_11400 at 2642.613 kb on + strand, within CA264_11400 at 2642.618 kb on - strand, within CA264_11400 at 2642.624 kb on - strand, within CA264_11400 at 2642.624 kb on - strand, within CA264_11400 at 2642.692 kb on + strand, within CA264_11400 at 2642.709 kb on + strand, within CA264_11400 at 2642.723 kb on + strand, within CA264_11400 at 2642.751 kb on - strand, within CA264_11400 at 2642.787 kb on + strand, within CA264_11400 at 2642.837 kb on + strand, within CA264_11400 at 2642.843 kb on + strand, within CA264_11400 at 2642.860 kb on - strand, within CA264_11400 at 2642.861 kb on + strand, within CA264_11400 at 2642.861 kb on + strand, within CA264_11400 at 2642.862 kb on - strand, within CA264_11400 at 2642.862 kb on - strand, within CA264_11400 at 2642.865 kb on - strand, within CA264_11400 at 2642.947 kb on + strand at 2642.948 kb on - strand at 2642.952 kb on + strand at 2642.982 kb on + strand at 2642.982 kb on + strand at 2642.983 kb on - strand at 2642.983 kb on - strand at 2642.983 kb on - strand at 2642.984 kb on + strand at 2643.079 kb on - strand at 2643.098 kb on - strand at 2643.106 kb on - strand at 2643.106 kb on - strand at 2643.108 kb on + strand at 2643.108 kb on + strand at 2643.109 kb on - strand at 2643.236 kb on + strand at 2643.236 kb on + strand at 2643.353 kb on + strand, within CA264_11405 at 2643.353 kb on + strand, within CA264_11405 at 2643.353 kb on + strand, within CA264_11405 at 2643.353 kb on + strand, within CA264_11405 at 2643.353 kb on + strand, within CA264_11405 at 2643.354 kb on - strand, within CA264_11405 at 2643.354 kb on - strand, within CA264_11405 at 2643.407 kb on + strand, within CA264_11405 at 2643.407 kb on + strand, within CA264_11405 at 2643.408 kb on - strand, within CA264_11405 at 2643.408 kb on - strand, within CA264_11405 at 2643.408 kb on - strand, within CA264_11405 at 2643.408 kb on - strand, within CA264_11405 at 2643.447 kb on - strand, within CA264_11405 at 2643.486 kb on - strand, within CA264_11405 at 2643.551 kb on + strand, within CA264_11405 at 2643.594 kb on - strand, within CA264_11405 at 2643.691 kb on + strand, within CA264_11405 at 2643.692 kb on - strand, within CA264_11405 at 2643.694 kb on + strand, within CA264_11405 at 2643.779 kb on + strand, within CA264_11405 at 2643.811 kb on - strand, within CA264_11405 at 2643.871 kb on + strand, within CA264_11405 at 2643.903 kb on + strand, within CA264_11405 at 2643.903 kb on + strand, within CA264_11405 at 2643.904 kb on - strand, within CA264_11405 at 2643.925 kb on - strand, within CA264_11405 at 2643.989 kb on + strand, within CA264_11405 at 2643.999 kb on - strand, within CA264_11405 at 2644.044 kb on + strand at 2644.058 kb on - strand at 2644.105 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 2,640,444 - CA264_11395 0.64 -0.5 2,640,475 + CA264_11395 0.66 +2.1 2,640,478 - CA264_11395 0.67 -0.2 2,640,492 - CA264_11395 0.68 -0.4 2,640,492 - CA264_11395 0.68 -1.3 2,640,492 - CA264_11395 0.68 -0.4 2,640,512 - CA264_11395 0.69 +0.1 2,640,512 - CA264_11395 0.69 -1.3 2,640,537 + CA264_11395 0.71 -0.5 2,640,662 - CA264_11395 0.82 -0.9 2,640,713 - CA264_11395 0.86 -0.3 2,640,714 + CA264_11395 0.86 -0.3 2,640,788 - -0.4 2,640,788 - -1.5 2,640,788 - -0.5 2,640,795 - -0.9 2,640,812 - -1.6 2,640,920 - -0.5 2,640,923 + +0.3 2,640,924 - +1.1 2,640,938 - -0.1 2,640,942 + -0.5 2,640,956 - -0.0 2,640,963 + +0.6 2,640,963 + +0.2 2,640,966 + -0.2 2,640,966 + +1.1 2,640,967 - +2.0 2,640,985 + -0.4 2,640,986 - -0.6 2,640,996 + -0.6 2,640,997 - -0.5 2,640,997 - -1.2 2,640,997 - +0.2 2,640,997 - -0.5 2,641,000 + -0.5 2,641,001 - -0.2 2,641,001 - -0.2 2,641,001 - +0.5 2,641,050 - -1.1 2,641,071 + +0.2 2,641,082 + +0.1 2,641,083 - -0.6 2,641,088 - -0.3 2,641,088 - -1.5 2,641,105 + +0.2 2,641,106 - -0.8 2,641,199 - -0.1 2,641,202 + -0.9 2,641,214 + -0.6 2,641,222 + -0.1 2,641,257 + +0.1 2,641,257 + -0.2 2,641,356 + -1.1 2,641,374 - -0.7 2,641,375 + +0.1 2,641,375 + +0.2 2,641,376 - +0.6 2,641,422 - +0.0 2,641,432 + -1.5 2,641,433 - -0.3 2,641,458 + -0.6 2,641,476 + -0.4 2,641,476 + -1.9 2,641,476 + -0.5 2,641,477 - +0.2 2,641,480 - -0.3 2,641,488 + -0.5 2,641,489 - -0.6 2,641,489 - -1.0 2,641,549 + -1.2 2,641,585 - -0.5 2,641,589 + +0.2 2,641,590 - +0.6 2,641,590 - -0.2 2,641,596 - CA264_11400 0.10 +0.0 2,641,655 - CA264_11400 0.14 +1.5 2,641,655 - CA264_11400 0.14 -0.2 2,641,660 + CA264_11400 0.14 -0.3 2,641,660 + CA264_11400 0.14 +2.4 2,641,660 + CA264_11400 0.14 -1.9 2,641,661 - CA264_11400 0.14 -0.7 2,641,661 - CA264_11400 0.14 -1.2 2,641,680 - CA264_11400 0.15 -0.6 2,641,686 - CA264_11400 0.15 -0.9 2,641,750 - CA264_11400 0.19 -1.0 2,641,751 + CA264_11400 0.19 -0.5 2,641,752 - CA264_11400 0.19 -1.2 2,641,771 + CA264_11400 0.21 -1.3 2,641,772 - CA264_11400 0.21 -0.4 2,641,772 - CA264_11400 0.21 -0.2 2,641,853 + CA264_11400 0.25 +0.8 2,641,874 + CA264_11400 0.27 -0.7 2,641,875 - CA264_11400 0.27 -0.5 2,641,952 + CA264_11400 0.31 +0.0 2,641,969 - CA264_11400 0.32 -3.5 2,641,969 - CA264_11400 0.32 +0.8 2,641,971 + CA264_11400 0.32 +0.9 2,641,982 + CA264_11400 0.33 -0.7 2,642,031 - CA264_11400 0.36 +0.3 2,642,031 - CA264_11400 0.36 +0.3 2,642,050 - CA264_11400 0.37 -0.1 2,642,050 - CA264_11400 0.37 +0.6 2,642,050 - CA264_11400 0.37 -0.5 2,642,079 + CA264_11400 0.39 -2.4 2,642,099 + CA264_11400 0.40 -0.4 2,642,099 + CA264_11400 0.40 +0.2 2,642,100 - CA264_11400 0.40 +0.2 2,642,100 - CA264_11400 0.40 -0.9 2,642,100 - CA264_11400 0.40 +0.1 2,642,100 - CA264_11400 0.40 +0.7 2,642,202 + CA264_11400 0.46 -0.6 2,642,262 + CA264_11400 0.50 +0.5 2,642,272 + CA264_11400 0.50 -0.1 2,642,273 - CA264_11400 0.50 -1.7 2,642,280 - CA264_11400 0.51 -0.2 2,642,313 + CA264_11400 0.53 -0.3 2,642,313 + CA264_11400 0.53 -0.4 2,642,314 - CA264_11400 0.53 -0.6 2,642,314 - CA264_11400 0.53 -0.7 2,642,381 + CA264_11400 0.57 +1.1 2,642,399 - CA264_11400 0.58 +0.4 2,642,399 - CA264_11400 0.58 -0.7 2,642,423 + CA264_11400 0.59 -1.1 2,642,424 - CA264_11400 0.59 -0.6 2,642,448 + CA264_11400 0.61 -0.1 2,642,479 + CA264_11400 0.63 -0.1 2,642,481 + CA264_11400 0.63 -0.8 2,642,482 - CA264_11400 0.63 -0.1 2,642,482 - CA264_11400 0.63 +0.2 2,642,482 - CA264_11400 0.63 +0.0 2,642,483 + CA264_11400 0.63 -0.8 2,642,483 + CA264_11400 0.63 -2.6 2,642,483 + CA264_11400 0.63 -0.6 2,642,484 - CA264_11400 0.63 -1.6 2,642,486 + CA264_11400 0.63 +0.0 2,642,486 + CA264_11400 0.63 +0.3 2,642,487 - CA264_11400 0.63 -0.3 2,642,529 - CA264_11400 0.66 -0.1 2,642,593 + CA264_11400 0.69 -1.5 2,642,594 - CA264_11400 0.70 -0.3 2,642,613 + CA264_11400 0.71 -0.3 2,642,613 + CA264_11400 0.71 -0.4 2,642,618 - CA264_11400 0.71 -1.1 2,642,624 - CA264_11400 0.71 +0.2 2,642,624 - CA264_11400 0.71 +1.2 2,642,692 + CA264_11400 0.75 -0.1 2,642,709 + CA264_11400 0.76 -0.0 2,642,723 + CA264_11400 0.77 -0.3 2,642,751 - CA264_11400 0.79 +0.4 2,642,787 + CA264_11400 0.81 +0.0 2,642,837 + CA264_11400 0.84 -2.3 2,642,843 + CA264_11400 0.84 +0.4 2,642,860 - CA264_11400 0.85 -1.5 2,642,861 + CA264_11400 0.85 -0.7 2,642,861 + CA264_11400 0.85 +0.2 2,642,862 - CA264_11400 0.85 +0.5 2,642,862 - CA264_11400 0.85 +0.8 2,642,865 - CA264_11400 0.86 +0.5 2,642,947 + +0.5 2,642,948 - +2.0 2,642,952 + -0.3 2,642,982 + -2.4 2,642,982 + -0.6 2,642,983 - -1.7 2,642,983 - -0.3 2,642,983 - +0.2 2,642,984 + -1.1 2,643,079 - -0.7 2,643,098 - +0.1 2,643,106 - -0.3 2,643,106 - -0.2 2,643,108 + -1.8 2,643,108 + +1.2 2,643,109 - -0.1 2,643,236 + -0.8 2,643,236 + -1.0 2,643,353 + CA264_11405 0.17 -0.4 2,643,353 + CA264_11405 0.17 +0.0 2,643,353 + CA264_11405 0.17 -0.7 2,643,353 + CA264_11405 0.17 -2.3 2,643,353 + CA264_11405 0.17 -1.2 2,643,354 - CA264_11405 0.17 -0.2 2,643,354 - CA264_11405 0.17 -0.7 2,643,407 + CA264_11405 0.23 -0.2 2,643,407 + CA264_11405 0.23 -0.3 2,643,408 - CA264_11405 0.23 -0.1 2,643,408 - CA264_11405 0.23 -1.6 2,643,408 - CA264_11405 0.23 +0.2 2,643,408 - CA264_11405 0.23 -0.4 2,643,447 - CA264_11405 0.28 -2.2 2,643,486 - CA264_11405 0.32 -0.4 2,643,551 + CA264_11405 0.39 -0.2 2,643,594 - CA264_11405 0.44 -0.1 2,643,691 + CA264_11405 0.55 -0.4 2,643,692 - CA264_11405 0.55 -2.0 2,643,694 + CA264_11405 0.55 -2.0 2,643,779 + CA264_11405 0.64 -0.7 2,643,811 - CA264_11405 0.68 +0.0 2,643,871 + CA264_11405 0.75 -0.8 2,643,903 + CA264_11405 0.78 +0.0 2,643,903 + CA264_11405 0.78 -1.5 2,643,904 - CA264_11405 0.78 -0.5 2,643,925 - CA264_11405 0.81 -0.2 2,643,989 + CA264_11405 0.88 +0.3 2,643,999 - CA264_11405 0.89 -1.0 2,644,044 + -0.5 2,644,058 - +0.2 2,644,105 + -0.3
Or see this region's nucleotide sequence