Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11380 and CA264_11385 are separated by 469 nucleotides CA264_11385 and CA264_11390 are separated by 300 nucleotides
CA264_11380: CA264_11380 - hypothetical protein, at 2,636,207 to 2,637,736
_11380
CA264_11385: CA264_11385 - hypothetical protein, at 2,638,206 to 2,638,529
_11385
CA264_11390: CA264_11390 - hypothetical protein, at 2,638,830 to 2,639,228
_11390
Position (kb)
2638
2639 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2637.213 kb on + strand, within CA264_11380 at 2637.243 kb on + strand, within CA264_11380 at 2637.322 kb on + strand, within CA264_11380 at 2637.337 kb on - strand, within CA264_11380 at 2637.376 kb on - strand, within CA264_11380 at 2637.376 kb on - strand, within CA264_11380 at 2637.384 kb on + strand, within CA264_11380 at 2637.385 kb on - strand, within CA264_11380 at 2637.486 kb on + strand, within CA264_11380 at 2637.543 kb on + strand, within CA264_11380 at 2637.544 kb on - strand, within CA264_11380 at 2637.544 kb on - strand, within CA264_11380 at 2637.549 kb on - strand, within CA264_11380 at 2637.549 kb on - strand, within CA264_11380 at 2637.598 kb on - strand at 2637.716 kb on + strand at 2637.717 kb on - strand at 2637.749 kb on + strand at 2637.750 kb on - strand at 2637.750 kb on - strand at 2637.759 kb on + strand at 2637.771 kb on + strand at 2637.772 kb on - strand at 2637.785 kb on - strand at 2637.785 kb on - strand at 2637.788 kb on + strand at 2637.789 kb on - strand at 2637.812 kb on - strand at 2637.860 kb on + strand at 2637.860 kb on + strand at 2637.862 kb on + strand at 2637.863 kb on - strand at 2637.875 kb on + strand at 2637.925 kb on + strand at 2637.972 kb on + strand at 2637.990 kb on + strand at 2637.991 kb on - strand at 2637.992 kb on + strand at 2637.992 kb on + strand at 2637.993 kb on - strand at 2637.993 kb on - strand at 2637.993 kb on - strand at 2638.068 kb on + strand at 2638.068 kb on + strand at 2638.068 kb on + strand at 2638.069 kb on - strand at 2638.093 kb on + strand at 2638.093 kb on + strand at 2638.094 kb on - strand at 2638.151 kb on - strand at 2638.269 kb on - strand, within CA264_11385 at 2638.324 kb on + strand, within CA264_11385 at 2638.397 kb on - strand, within CA264_11385 at 2638.397 kb on - strand, within CA264_11385 at 2638.397 kb on - strand, within CA264_11385 at 2638.401 kb on + strand, within CA264_11385 at 2638.402 kb on - strand, within CA264_11385 at 2638.402 kb on - strand, within CA264_11385 at 2638.410 kb on - strand, within CA264_11385 at 2638.422 kb on + strand, within CA264_11385 at 2638.510 kb on - strand at 2638.510 kb on - strand at 2638.525 kb on - strand at 2638.529 kb on + strand at 2638.530 kb on - strand at 2638.621 kb on - strand at 2638.629 kb on + strand at 2638.630 kb on - strand at 2638.641 kb on + strand at 2638.675 kb on + strand at 2638.675 kb on + strand at 2638.676 kb on - strand at 2638.676 kb on - strand at 2638.676 kb on - strand at 2638.678 kb on + strand at 2638.679 kb on - strand at 2638.700 kb on - strand at 2638.714 kb on - strand at 2638.723 kb on + strand at 2638.724 kb on - strand at 2638.758 kb on - strand at 2638.774 kb on - strand at 2638.777 kb on - strand at 2638.778 kb on + strand at 2638.778 kb on + strand at 2638.779 kb on - strand at 2638.781 kb on - strand at 2638.787 kb on + strand at 2638.787 kb on + strand at 2638.787 kb on + strand at 2638.788 kb on - strand at 2638.826 kb on + strand at 2638.826 kb on + strand at 2638.826 kb on + strand at 2638.826 kb on + strand at 2638.827 kb on - strand at 2638.827 kb on - strand at 2638.827 kb on - strand at 2638.829 kb on + strand at 2638.829 kb on + strand at 2638.830 kb on - strand at 2639.086 kb on - strand, within CA264_11390 at 2639.218 kb on + strand at 2639.219 kb on - strand at 2639.313 kb on + strand at 2639.313 kb on + strand at 2639.341 kb on + strand at 2639.342 kb on - strand at 2639.342 kb on - strand at 2639.342 kb on - strand at 2639.346 kb on - strand at 2639.372 kb on + strand at 2639.372 kb on + strand at 2639.382 kb on + strand at 2639.382 kb on + strand at 2639.383 kb on - strand at 2639.383 kb on - strand at 2639.391 kb on - strand at 2639.391 kb on - strand at 2639.391 kb on - strand at 2639.392 kb on + strand at 2639.393 kb on - strand at 2639.408 kb on + strand at 2639.417 kb on - strand at 2639.460 kb on + strand at 2639.461 kb on - strand at 2639.461 kb on - strand at 2639.466 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 2,637,213 + CA264_11380 0.66 +0.7 2,637,243 + CA264_11380 0.68 -0.7 2,637,322 + CA264_11380 0.73 -0.8 2,637,337 - CA264_11380 0.74 -0.6 2,637,376 - CA264_11380 0.76 -0.1 2,637,376 - CA264_11380 0.76 -0.4 2,637,384 + CA264_11380 0.77 +0.2 2,637,385 - CA264_11380 0.77 -1.3 2,637,486 + CA264_11380 0.84 -1.3 2,637,543 + CA264_11380 0.87 -0.3 2,637,544 - CA264_11380 0.87 -0.2 2,637,544 - CA264_11380 0.87 +0.1 2,637,549 - CA264_11380 0.88 -1.2 2,637,549 - CA264_11380 0.88 +0.9 2,637,598 - +0.3 2,637,716 + +0.2 2,637,717 - +0.5 2,637,749 + -0.0 2,637,750 - -1.4 2,637,750 - -1.2 2,637,759 + -0.8 2,637,771 + -1.7 2,637,772 - -1.3 2,637,785 - +0.0 2,637,785 - -0.2 2,637,788 + +0.7 2,637,789 - +0.5 2,637,812 - +0.5 2,637,860 + +1.6 2,637,860 + +0.1 2,637,862 + -0.3 2,637,863 - -0.6 2,637,875 + -0.5 2,637,925 + -0.9 2,637,972 + +0.9 2,637,990 + -0.7 2,637,991 - +0.1 2,637,992 + -0.4 2,637,992 + -0.5 2,637,993 - -1.3 2,637,993 - +0.7 2,637,993 - +0.2 2,638,068 + -0.2 2,638,068 + +0.5 2,638,068 + -0.3 2,638,069 - +3.3 2,638,093 + +0.0 2,638,093 + -0.3 2,638,094 - +0.9 2,638,151 - -0.6 2,638,269 - CA264_11385 0.19 -0.3 2,638,324 + CA264_11385 0.36 -0.8 2,638,397 - CA264_11385 0.59 -0.9 2,638,397 - CA264_11385 0.59 -1.0 2,638,397 - CA264_11385 0.59 -0.4 2,638,401 + CA264_11385 0.60 +0.3 2,638,402 - CA264_11385 0.60 -0.4 2,638,402 - CA264_11385 0.60 -0.3 2,638,410 - CA264_11385 0.63 -1.1 2,638,422 + CA264_11385 0.67 -1.0 2,638,510 - +2.8 2,638,510 - +1.1 2,638,525 - +0.3 2,638,529 + -1.0 2,638,530 - +1.1 2,638,621 - -1.0 2,638,629 + -1.5 2,638,630 - -0.2 2,638,641 + -1.8 2,638,675 + +0.9 2,638,675 + -0.5 2,638,676 - +2.3 2,638,676 - -1.2 2,638,676 - -0.5 2,638,678 + -1.3 2,638,679 - -0.9 2,638,700 - -0.4 2,638,714 - -1.0 2,638,723 + -1.6 2,638,724 - -0.2 2,638,758 - +0.1 2,638,774 - -0.6 2,638,777 - -1.5 2,638,778 + -0.6 2,638,778 + -0.1 2,638,779 - +0.2 2,638,781 - -0.1 2,638,787 + +0.1 2,638,787 + -0.9 2,638,787 + -0.7 2,638,788 - -0.1 2,638,826 + -0.4 2,638,826 + -0.3 2,638,826 + -1.1 2,638,826 + -0.4 2,638,827 - +1.5 2,638,827 - -0.3 2,638,827 - -1.2 2,638,829 + -1.2 2,638,829 + -1.0 2,638,830 - -0.4 2,639,086 - CA264_11390 0.64 +0.5 2,639,218 + +0.0 2,639,219 - -0.4 2,639,313 + -1.3 2,639,313 + -0.5 2,639,341 + -2.1 2,639,342 - -0.6 2,639,342 - -0.9 2,639,342 - +0.1 2,639,346 - -0.8 2,639,372 + +0.2 2,639,372 + -0.8 2,639,382 + +0.1 2,639,382 + +1.7 2,639,383 - +0.7 2,639,383 - -1.0 2,639,391 - +0.1 2,639,391 - -0.3 2,639,391 - -0.3 2,639,392 + -1.9 2,639,393 - -0.8 2,639,408 + +1.2 2,639,417 - -0.6 2,639,460 + -0.2 2,639,461 - +2.1 2,639,461 - +0.4 2,639,466 - -0.1
Or see this region's nucleotide sequence