Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10730 and CA264_10735 are separated by 279 nucleotides CA264_10735 and CA264_10740 are separated by 91 nucleotides
CA264_10730: CA264_10730 - aconitate hydratase, at 2,478,007 to 2,480,286
_10730
CA264_10735: CA264_10735 - alkyl hydroperoxide reductase, at 2,480,566 to 2,481,747
_10735
CA264_10740: CA264_10740 - hypothetical protein, at 2,481,839 to 2,482,630
_10740
Position (kb)
2480
2481
2482 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2480.310 kb on + strand at 2480.311 kb on - strand at 2480.316 kb on - strand at 2480.347 kb on - strand at 2480.366 kb on - strand at 2480.372 kb on + strand at 2480.372 kb on + strand at 2480.373 kb on - strand at 2480.380 kb on + strand at 2480.380 kb on + strand at 2480.380 kb on + strand at 2480.389 kb on - strand at 2480.389 kb on - strand at 2480.407 kb on - strand at 2480.428 kb on + strand at 2480.429 kb on - strand at 2480.429 kb on - strand at 2480.435 kb on + strand at 2480.435 kb on + strand at 2480.435 kb on + strand at 2480.436 kb on - strand at 2480.442 kb on + strand at 2480.549 kb on + strand at 2480.559 kb on + strand at 2480.559 kb on + strand at 2480.559 kb on + strand at 2480.560 kb on - strand at 2480.565 kb on + strand at 2480.565 kb on + strand at 2480.566 kb on - strand at 2480.566 kb on - strand at 2480.589 kb on - strand at 2480.684 kb on + strand at 2480.687 kb on - strand, within CA264_10735 at 2480.687 kb on - strand, within CA264_10735 at 2480.724 kb on + strand, within CA264_10735 at 2480.845 kb on + strand, within CA264_10735 at 2480.845 kb on + strand, within CA264_10735 at 2480.845 kb on + strand, within CA264_10735 at 2480.846 kb on - strand, within CA264_10735 at 2480.971 kb on + strand, within CA264_10735 at 2480.972 kb on - strand, within CA264_10735 at 2481.049 kb on + strand, within CA264_10735 at 2481.082 kb on - strand, within CA264_10735 at 2481.091 kb on - strand, within CA264_10735 at 2481.163 kb on + strand, within CA264_10735 at 2481.181 kb on + strand, within CA264_10735 at 2481.240 kb on + strand, within CA264_10735 at 2481.326 kb on - strand, within CA264_10735 at 2481.326 kb on - strand, within CA264_10735 at 2481.390 kb on + strand, within CA264_10735 at 2481.409 kb on + strand, within CA264_10735 at 2481.410 kb on - strand, within CA264_10735 at 2481.449 kb on + strand, within CA264_10735 at 2481.521 kb on + strand, within CA264_10735 at 2481.526 kb on + strand, within CA264_10735 at 2481.526 kb on + strand, within CA264_10735 at 2481.526 kb on + strand, within CA264_10735 at 2481.641 kb on + strand at 2481.642 kb on - strand at 2481.650 kb on + strand at 2481.650 kb on + strand at 2481.650 kb on + strand at 2481.651 kb on - strand at 2481.651 kb on - strand at 2481.685 kb on + strand at 2481.686 kb on - strand at 2481.812 kb on - strand at 2481.828 kb on + strand at 2481.841 kb on - strand at 2481.861 kb on + strand at 2481.866 kb on - strand at 2481.899 kb on - strand at 2481.899 kb on - strand at 2481.919 kb on + strand, within CA264_10740 at 2481.919 kb on + strand, within CA264_10740 at 2481.933 kb on + strand, within CA264_10740 at 2481.933 kb on + strand, within CA264_10740 at 2481.937 kb on + strand, within CA264_10740 at 2481.937 kb on + strand, within CA264_10740 at 2481.943 kb on - strand, within CA264_10740 at 2481.960 kb on + strand, within CA264_10740 at 2481.960 kb on + strand, within CA264_10740 at 2481.961 kb on - strand, within CA264_10740 at 2481.974 kb on + strand, within CA264_10740 at 2481.974 kb on + strand, within CA264_10740 at 2481.975 kb on - strand, within CA264_10740 at 2482.008 kb on - strand, within CA264_10740 at 2482.057 kb on - strand, within CA264_10740 at 2482.105 kb on + strand, within CA264_10740 at 2482.105 kb on + strand, within CA264_10740 at 2482.106 kb on - strand, within CA264_10740 at 2482.106 kb on - strand, within CA264_10740 at 2482.106 kb on - strand, within CA264_10740 at 2482.110 kb on + strand, within CA264_10740 at 2482.111 kb on - strand, within CA264_10740 at 2482.125 kb on + strand, within CA264_10740 at 2482.126 kb on - strand, within CA264_10740 at 2482.135 kb on + strand, within CA264_10740 at 2482.135 kb on + strand, within CA264_10740 at 2482.180 kb on + strand, within CA264_10740 at 2482.181 kb on - strand, within CA264_10740 at 2482.182 kb on + strand, within CA264_10740 at 2482.182 kb on + strand, within CA264_10740 at 2482.183 kb on - strand, within CA264_10740 at 2482.205 kb on + strand, within CA264_10740 at 2482.221 kb on + strand, within CA264_10740 at 2482.221 kb on + strand, within CA264_10740 at 2482.221 kb on + strand, within CA264_10740 at 2482.222 kb on - strand, within CA264_10740 at 2482.303 kb on + strand, within CA264_10740 at 2482.304 kb on - strand, within CA264_10740 at 2482.379 kb on + strand, within CA264_10740 at 2482.379 kb on + strand, within CA264_10740 at 2482.453 kb on + strand, within CA264_10740 at 2482.454 kb on - strand, within CA264_10740 at 2482.459 kb on + strand, within CA264_10740 at 2482.460 kb on - strand, within CA264_10740 at 2482.464 kb on - strand, within CA264_10740 at 2482.479 kb on - strand, within CA264_10740 at 2482.530 kb on - strand, within CA264_10740 at 2482.530 kb on - strand, within CA264_10740 at 2482.614 kb on - strand at 2482.638 kb on + strand at 2482.638 kb on + strand at 2482.639 kb on - strand at 2482.704 kb on - strand at 2482.704 kb on - strand at 2482.704 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 2,480,310 + -0.1 2,480,311 - -0.6 2,480,316 - +1.2 2,480,347 - +1.2 2,480,366 - -1.0 2,480,372 + -2.4 2,480,372 + +1.3 2,480,373 - -0.7 2,480,380 + -0.6 2,480,380 + -1.6 2,480,380 + +0.5 2,480,389 - -1.1 2,480,389 - -1.4 2,480,407 - -0.9 2,480,428 + -0.1 2,480,429 - +0.9 2,480,429 - -0.5 2,480,435 + -2.2 2,480,435 + +0.9 2,480,435 + -0.6 2,480,436 - -1.8 2,480,442 + +0.4 2,480,549 + -0.4 2,480,559 + -1.5 2,480,559 + -0.2 2,480,559 + +1.2 2,480,560 - +1.2 2,480,565 + +0.2 2,480,565 + -1.0 2,480,566 - -0.2 2,480,566 - -0.2 2,480,589 - +0.4 2,480,684 + -0.9 2,480,687 - CA264_10735 0.10 +0.2 2,480,687 - CA264_10735 0.10 -2.3 2,480,724 + CA264_10735 0.13 -2.8 2,480,845 + CA264_10735 0.24 -0.4 2,480,845 + CA264_10735 0.24 -1.0 2,480,845 + CA264_10735 0.24 -1.2 2,480,846 - CA264_10735 0.24 +0.4 2,480,971 + CA264_10735 0.34 -0.7 2,480,972 - CA264_10735 0.34 +0.2 2,481,049 + CA264_10735 0.41 +0.1 2,481,082 - CA264_10735 0.44 -1.0 2,481,091 - CA264_10735 0.44 -1.0 2,481,163 + CA264_10735 0.51 -0.8 2,481,181 + CA264_10735 0.52 -0.3 2,481,240 + CA264_10735 0.57 +0.9 2,481,326 - CA264_10735 0.64 -0.8 2,481,326 - CA264_10735 0.64 -1.0 2,481,390 + CA264_10735 0.70 -0.7 2,481,409 + CA264_10735 0.71 +0.2 2,481,410 - CA264_10735 0.71 -2.3 2,481,449 + CA264_10735 0.75 -2.0 2,481,521 + CA264_10735 0.81 -0.8 2,481,526 + CA264_10735 0.81 +0.2 2,481,526 + CA264_10735 0.81 -0.4 2,481,526 + CA264_10735 0.81 -0.2 2,481,641 + -0.7 2,481,642 - +0.4 2,481,650 + -1.7 2,481,650 + +0.6 2,481,650 + -0.1 2,481,651 - -0.1 2,481,651 - -0.1 2,481,685 + -0.7 2,481,686 - +0.2 2,481,812 - -0.7 2,481,828 + -0.6 2,481,841 - -1.2 2,481,861 + -1.1 2,481,866 - +0.4 2,481,899 - +0.4 2,481,899 - -2.6 2,481,919 + CA264_10740 0.10 +1.1 2,481,919 + CA264_10740 0.10 -1.1 2,481,933 + CA264_10740 0.12 -1.5 2,481,933 + CA264_10740 0.12 -0.3 2,481,937 + CA264_10740 0.12 -0.7 2,481,937 + CA264_10740 0.12 -0.1 2,481,943 - CA264_10740 0.13 +1.0 2,481,960 + CA264_10740 0.15 -0.6 2,481,960 + CA264_10740 0.15 -0.8 2,481,961 - CA264_10740 0.15 +1.1 2,481,974 + CA264_10740 0.17 -0.5 2,481,974 + CA264_10740 0.17 +2.0 2,481,975 - CA264_10740 0.17 +1.2 2,482,008 - CA264_10740 0.21 +0.1 2,482,057 - CA264_10740 0.28 -1.2 2,482,105 + CA264_10740 0.34 +0.0 2,482,105 + CA264_10740 0.34 -0.2 2,482,106 - CA264_10740 0.34 -0.5 2,482,106 - CA264_10740 0.34 -1.0 2,482,106 - CA264_10740 0.34 -0.2 2,482,110 + CA264_10740 0.34 -0.2 2,482,111 - CA264_10740 0.34 -0.1 2,482,125 + CA264_10740 0.36 +0.0 2,482,126 - CA264_10740 0.36 -1.7 2,482,135 + CA264_10740 0.37 +1.7 2,482,135 + CA264_10740 0.37 +0.2 2,482,180 + CA264_10740 0.43 +0.2 2,482,181 - CA264_10740 0.43 -0.6 2,482,182 + CA264_10740 0.43 -0.3 2,482,182 + CA264_10740 0.43 -0.8 2,482,183 - CA264_10740 0.43 +0.4 2,482,205 + CA264_10740 0.46 -0.3 2,482,221 + CA264_10740 0.48 +0.2 2,482,221 + CA264_10740 0.48 +0.5 2,482,221 + CA264_10740 0.48 +1.2 2,482,222 - CA264_10740 0.48 +0.2 2,482,303 + CA264_10740 0.59 +0.1 2,482,304 - CA264_10740 0.59 -1.1 2,482,379 + CA264_10740 0.68 -0.5 2,482,379 + CA264_10740 0.68 +2.2 2,482,453 + CA264_10740 0.78 +0.6 2,482,454 - CA264_10740 0.78 -0.6 2,482,459 + CA264_10740 0.78 -0.5 2,482,460 - CA264_10740 0.78 +0.9 2,482,464 - CA264_10740 0.79 -0.8 2,482,479 - CA264_10740 0.81 +0.1 2,482,530 - CA264_10740 0.87 -2.4 2,482,530 - CA264_10740 0.87 -0.1 2,482,614 - -0.3 2,482,638 + -0.7 2,482,638 + -0.9 2,482,639 - +1.0 2,482,704 - +0.4 2,482,704 - +2.5 2,482,704 - +1.0
Or see this region's nucleotide sequence