Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10565 and CA264_10570 are separated by 61 nucleotides CA264_10570 and CA264_10575 are separated by 77 nucleotides CA264_10575 and CA264_10580 are separated by 15 nucleotides
CA264_10565: CA264_10565 - cation transporter, at 2,448,537 to 2,449,445
_10565
CA264_10570: CA264_10570 - hypothetical protein, at 2,449,507 to 2,449,914
_10570
CA264_10575: CA264_10575 - hypothetical protein, at 2,449,992 to 2,450,768
_10575
CA264_10580: CA264_10580 - hypothetical protein, at 2,450,784 to 2,451,182
_10580
Position (kb)
2449
2450 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2448.540 kb on + strand at 2448.544 kb on + strand at 2448.546 kb on + strand at 2448.546 kb on + strand at 2448.546 kb on + strand at 2448.552 kb on + strand at 2448.597 kb on + strand at 2448.650 kb on + strand, within CA264_10565 at 2448.783 kb on + strand, within CA264_10565 at 2448.784 kb on - strand, within CA264_10565 at 2448.784 kb on - strand, within CA264_10565 at 2448.885 kb on + strand, within CA264_10565 at 2449.029 kb on - strand, within CA264_10565 at 2449.108 kb on - strand, within CA264_10565 at 2449.108 kb on - strand, within CA264_10565 at 2449.160 kb on + strand, within CA264_10565 at 2449.160 kb on + strand, within CA264_10565 at 2449.161 kb on - strand, within CA264_10565 at 2449.161 kb on - strand, within CA264_10565 at 2449.170 kb on - strand, within CA264_10565 at 2449.201 kb on + strand, within CA264_10565 at 2449.202 kb on - strand, within CA264_10565 at 2449.207 kb on + strand, within CA264_10565 at 2449.207 kb on + strand, within CA264_10565 at 2449.208 kb on - strand, within CA264_10565 at 2449.208 kb on - strand, within CA264_10565 at 2449.208 kb on - strand, within CA264_10565 at 2449.208 kb on - strand, within CA264_10565 at 2449.448 kb on + strand at 2449.448 kb on + strand at 2449.448 kb on + strand at 2449.448 kb on + strand at 2449.451 kb on + strand at 2449.576 kb on - strand, within CA264_10570 at 2449.576 kb on - strand, within CA264_10570 at 2449.576 kb on - strand, within CA264_10570 at 2449.576 kb on - strand, within CA264_10570 at 2449.582 kb on + strand, within CA264_10570 at 2449.702 kb on + strand, within CA264_10570 at 2449.748 kb on - strand, within CA264_10570 at 2449.791 kb on + strand, within CA264_10570 at 2449.833 kb on + strand, within CA264_10570 at 2449.833 kb on + strand, within CA264_10570 at 2449.834 kb on - strand, within CA264_10570 at 2449.834 kb on - strand, within CA264_10570 at 2449.834 kb on - strand, within CA264_10570 at 2449.834 kb on - strand, within CA264_10570 at 2449.838 kb on - strand, within CA264_10570 at 2449.838 kb on - strand, within CA264_10570 at 2449.847 kb on - strand, within CA264_10570 at 2449.940 kb on + strand at 2449.946 kb on - strand at 2449.997 kb on - strand at 2449.997 kb on - strand at 2449.997 kb on - strand at 2449.999 kb on - strand at 2449.999 kb on - strand at 2450.044 kb on + strand at 2450.242 kb on - strand, within CA264_10575 at 2450.339 kb on + strand, within CA264_10575 at 2450.595 kb on + strand, within CA264_10575 at 2450.596 kb on - strand, within CA264_10575 at 2450.756 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 2,448,540 + -1.6 2,448,544 + +0.9 2,448,546 + +2.3 2,448,546 + +0.5 2,448,546 + -0.6 2,448,552 + -0.4 2,448,597 + -0.7 2,448,650 + CA264_10565 0.12 -0.5 2,448,783 + CA264_10565 0.27 -1.0 2,448,784 - CA264_10565 0.27 -1.7 2,448,784 - CA264_10565 0.27 -1.5 2,448,885 + CA264_10565 0.38 -1.1 2,449,029 - CA264_10565 0.54 +1.3 2,449,108 - CA264_10565 0.63 -0.7 2,449,108 - CA264_10565 0.63 -0.1 2,449,160 + CA264_10565 0.69 -0.3 2,449,160 + CA264_10565 0.69 -0.9 2,449,161 - CA264_10565 0.69 -1.4 2,449,161 - CA264_10565 0.69 -0.7 2,449,170 - CA264_10565 0.70 -0.4 2,449,201 + CA264_10565 0.73 -2.0 2,449,202 - CA264_10565 0.73 -0.4 2,449,207 + CA264_10565 0.74 +0.2 2,449,207 + CA264_10565 0.74 +1.0 2,449,208 - CA264_10565 0.74 -0.7 2,449,208 - CA264_10565 0.74 -0.2 2,449,208 - CA264_10565 0.74 -1.8 2,449,208 - CA264_10565 0.74 +0.2 2,449,448 + -0.8 2,449,448 + +1.9 2,449,448 + -0.1 2,449,448 + -0.4 2,449,451 + -0.6 2,449,576 - CA264_10570 0.17 -0.9 2,449,576 - CA264_10570 0.17 -0.7 2,449,576 - CA264_10570 0.17 +0.1 2,449,576 - CA264_10570 0.17 +0.3 2,449,582 + CA264_10570 0.18 -0.1 2,449,702 + CA264_10570 0.48 -1.2 2,449,748 - CA264_10570 0.59 -0.8 2,449,791 + CA264_10570 0.70 -0.2 2,449,833 + CA264_10570 0.80 -0.1 2,449,833 + CA264_10570 0.80 -0.5 2,449,834 - CA264_10570 0.80 -0.0 2,449,834 - CA264_10570 0.80 -0.4 2,449,834 - CA264_10570 0.80 -0.5 2,449,834 - CA264_10570 0.80 -0.8 2,449,838 - CA264_10570 0.81 -0.6 2,449,838 - CA264_10570 0.81 -0.2 2,449,847 - CA264_10570 0.83 +1.1 2,449,940 + -0.1 2,449,946 - -0.2 2,449,997 - -0.3 2,449,997 - -0.3 2,449,997 - -0.7 2,449,999 - -1.0 2,449,999 - +1.4 2,450,044 + +1.7 2,450,242 - CA264_10575 0.32 -0.3 2,450,339 + CA264_10575 0.45 -1.0 2,450,595 + CA264_10575 0.78 -1.0 2,450,596 - CA264_10575 0.78 -0.2 2,450,756 - -0.7
Or see this region's nucleotide sequence