Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10145 and CA264_10150 are separated by 858 nucleotides CA264_10150 and CA264_10155 are separated by 9 nucleotides
CA264_10145: CA264_10145 - DUF1275 family protein, at 2,354,596 to 2,355,327
_10145
CA264_10150: CA264_10150 - hypothetical protein, at 2,356,186 to 2,356,497
_10150
CA264_10155: CA264_10155 - hypothetical protein, at 2,356,507 to 2,358,483
_10155
Position (kb)
2356
2357 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2355.283 kb on + strand at 2355.289 kb on - strand at 2355.397 kb on - strand at 2355.405 kb on + strand at 2355.406 kb on - strand at 2355.443 kb on + strand at 2355.444 kb on - strand at 2355.444 kb on - strand at 2355.449 kb on - strand at 2355.449 kb on - strand at 2355.462 kb on + strand at 2355.519 kb on + strand at 2355.520 kb on - strand at 2355.533 kb on + strand at 2355.534 kb on - strand at 2355.538 kb on - strand at 2355.678 kb on + strand at 2355.999 kb on + strand at 2356.055 kb on + strand at 2356.095 kb on + strand at 2356.132 kb on - strand at 2356.133 kb on + strand at 2356.134 kb on - strand at 2356.152 kb on + strand at 2356.156 kb on + strand at 2356.156 kb on + strand at 2356.156 kb on + strand at 2356.185 kb on - strand at 2356.243 kb on + strand, within CA264_10150 at 2356.244 kb on - strand, within CA264_10150 at 2356.264 kb on - strand, within CA264_10150 at 2356.299 kb on + strand, within CA264_10150 at 2356.300 kb on - strand, within CA264_10150 at 2356.300 kb on - strand, within CA264_10150 at 2356.310 kb on - strand, within CA264_10150 at 2356.322 kb on + strand, within CA264_10150 at 2356.323 kb on - strand, within CA264_10150 at 2356.364 kb on + strand, within CA264_10150 at 2356.365 kb on - strand, within CA264_10150 at 2356.463 kb on - strand, within CA264_10150 at 2356.463 kb on - strand, within CA264_10150 at 2356.463 kb on - strand, within CA264_10150 at 2356.490 kb on - strand at 2356.553 kb on - strand at 2356.569 kb on + strand at 2356.570 kb on - strand at 2356.573 kb on - strand at 2356.743 kb on + strand, within CA264_10155 at 2356.743 kb on + strand, within CA264_10155 at 2356.743 kb on + strand, within CA264_10155 at 2356.954 kb on + strand, within CA264_10155 at 2356.985 kb on + strand, within CA264_10155 at 2356.986 kb on - strand, within CA264_10155 at 2356.986 kb on - strand, within CA264_10155 at 2356.987 kb on + strand, within CA264_10155 at 2356.988 kb on - strand, within CA264_10155 at 2356.988 kb on - strand, within CA264_10155 at 2357.199 kb on + strand, within CA264_10155 at 2357.211 kb on + strand, within CA264_10155 at 2357.218 kb on - strand, within CA264_10155 at 2357.360 kb on + strand, within CA264_10155 at 2357.360 kb on + strand, within CA264_10155 at 2357.361 kb on - strand, within CA264_10155 at 2357.365 kb on + strand, within CA264_10155 at 2357.365 kb on + strand, within CA264_10155 at 2357.365 kb on + strand, within CA264_10155 at 2357.383 kb on + strand, within CA264_10155 at 2357.430 kb on + strand, within CA264_10155 at 2357.431 kb on - strand, within CA264_10155 at 2357.435 kb on - strand, within CA264_10155 at 2357.435 kb on - strand, within CA264_10155
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 2,355,283 + +2.1 2,355,289 - -2.6 2,355,397 - -1.1 2,355,405 + -0.9 2,355,406 - +0.2 2,355,443 + +0.0 2,355,444 - +0.1 2,355,444 - -0.9 2,355,449 - -1.3 2,355,449 - +0.4 2,355,462 + -0.8 2,355,519 + +0.9 2,355,520 - +0.3 2,355,533 + -1.1 2,355,534 - -1.2 2,355,538 - -1.0 2,355,678 + +0.7 2,355,999 + -0.2 2,356,055 + -0.6 2,356,095 + -0.1 2,356,132 - -0.2 2,356,133 + -0.6 2,356,134 - +0.3 2,356,152 + -0.1 2,356,156 + +0.0 2,356,156 + +1.1 2,356,156 + -0.1 2,356,185 - -0.4 2,356,243 + CA264_10150 0.18 +0.8 2,356,244 - CA264_10150 0.19 -0.3 2,356,264 - CA264_10150 0.25 +0.5 2,356,299 + CA264_10150 0.36 -0.5 2,356,300 - CA264_10150 0.37 +2.9 2,356,300 - CA264_10150 0.37 -1.5 2,356,310 - CA264_10150 0.40 +0.9 2,356,322 + CA264_10150 0.44 -0.9 2,356,323 - CA264_10150 0.44 -0.3 2,356,364 + CA264_10150 0.57 -0.8 2,356,365 - CA264_10150 0.57 -1.2 2,356,463 - CA264_10150 0.89 +0.0 2,356,463 - CA264_10150 0.89 +0.1 2,356,463 - CA264_10150 0.89 +0.1 2,356,490 - -0.3 2,356,553 - +1.3 2,356,569 + -0.6 2,356,570 - -0.2 2,356,573 - -1.6 2,356,743 + CA264_10155 0.12 +1.0 2,356,743 + CA264_10155 0.12 -1.7 2,356,743 + CA264_10155 0.12 +0.3 2,356,954 + CA264_10155 0.23 -1.7 2,356,985 + CA264_10155 0.24 +0.3 2,356,986 - CA264_10155 0.24 +1.5 2,356,986 - CA264_10155 0.24 +0.4 2,356,987 + CA264_10155 0.24 +0.9 2,356,988 - CA264_10155 0.24 +0.1 2,356,988 - CA264_10155 0.24 +1.9 2,357,199 + CA264_10155 0.35 +0.3 2,357,211 + CA264_10155 0.36 -0.7 2,357,218 - CA264_10155 0.36 -2.0 2,357,360 + CA264_10155 0.43 -1.0 2,357,360 + CA264_10155 0.43 -0.7 2,357,361 - CA264_10155 0.43 +1.1 2,357,365 + CA264_10155 0.43 -1.1 2,357,365 + CA264_10155 0.43 +0.2 2,357,365 + CA264_10155 0.43 -2.4 2,357,383 + CA264_10155 0.44 -0.6 2,357,430 + CA264_10155 0.47 -0.4 2,357,431 - CA264_10155 0.47 +1.2 2,357,435 - CA264_10155 0.47 -0.1 2,357,435 - CA264_10155 0.47 -0.4
Or see this region's nucleotide sequence