Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09765 and CA264_09770 are separated by 114 nucleotides CA264_09770 and CA264_09775 are separated by 582 nucleotides
CA264_09765: CA264_09765 - NAD(P)H-dependent oxidoreductase, at 2,267,170 to 2,267,799
_09765
CA264_09770: CA264_09770 - transcriptional regulator, at 2,267,914 to 2,268,264
_09770
CA264_09775: CA264_09775 - alpha/beta hydrolase, at 2,268,847 to 2,269,752
_09775
Position (kb)
2267
2268
2269 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2266.979 kb on + strand at 2266.979 kb on + strand at 2266.989 kb on - strand at 2266.993 kb on + strand at 2266.993 kb on + strand at 2267.051 kb on + strand at 2267.111 kb on - strand at 2267.125 kb on + strand at 2267.148 kb on + strand at 2267.155 kb on + strand at 2267.184 kb on + strand at 2267.209 kb on + strand at 2267.217 kb on + strand at 2267.252 kb on + strand, within CA264_09765 at 2267.258 kb on - strand, within CA264_09765 at 2267.400 kb on - strand, within CA264_09765 at 2267.409 kb on + strand, within CA264_09765 at 2267.428 kb on - strand, within CA264_09765 at 2267.528 kb on + strand, within CA264_09765 at 2267.528 kb on + strand, within CA264_09765 at 2267.528 kb on + strand, within CA264_09765 at 2267.528 kb on + strand, within CA264_09765 at 2267.529 kb on - strand, within CA264_09765 at 2267.529 kb on - strand, within CA264_09765 at 2267.529 kb on - strand, within CA264_09765 at 2267.539 kb on - strand, within CA264_09765 at 2267.539 kb on - strand, within CA264_09765 at 2267.664 kb on + strand, within CA264_09765 at 2267.768 kb on + strand at 2267.789 kb on - strand at 2267.867 kb on + strand at 2267.867 kb on + strand at 2267.897 kb on + strand at 2267.897 kb on + strand at 2267.955 kb on + strand, within CA264_09770 at 2268.066 kb on - strand, within CA264_09770 at 2268.075 kb on - strand, within CA264_09770 at 2268.126 kb on + strand, within CA264_09770 at 2268.126 kb on + strand, within CA264_09770 at 2268.127 kb on - strand, within CA264_09770 at 2268.143 kb on + strand, within CA264_09770 at 2268.147 kb on + strand, within CA264_09770 at 2268.170 kb on - strand, within CA264_09770 at 2268.176 kb on + strand, within CA264_09770 at 2268.176 kb on + strand, within CA264_09770 at 2268.251 kb on + strand at 2268.263 kb on - strand at 2268.313 kb on - strand at 2268.331 kb on - strand at 2268.334 kb on - strand at 2268.354 kb on - strand at 2268.438 kb on - strand at 2268.507 kb on + strand at 2268.507 kb on + strand at 2268.507 kb on + strand at 2268.507 kb on + strand at 2268.507 kb on + strand at 2268.508 kb on - strand at 2268.508 kb on - strand at 2268.509 kb on + strand at 2268.509 kb on + strand at 2268.509 kb on + strand at 2268.510 kb on - strand at 2268.510 kb on - strand at 2268.510 kb on - strand at 2268.548 kb on + strand at 2268.575 kb on - strand at 2268.578 kb on + strand at 2268.579 kb on - strand at 2268.582 kb on + strand at 2268.582 kb on + strand at 2268.596 kb on + strand at 2268.596 kb on + strand at 2268.597 kb on - strand at 2268.606 kb on + strand at 2268.661 kb on - strand at 2268.716 kb on - strand at 2268.730 kb on + strand at 2268.730 kb on + strand at 2268.731 kb on - strand at 2268.731 kb on - strand at 2268.731 kb on - strand at 2268.731 kb on - strand at 2268.731 kb on - strand at 2268.732 kb on + strand at 2268.733 kb on - strand at 2268.733 kb on - strand at 2268.733 kb on - strand at 2268.741 kb on + strand at 2268.743 kb on + strand at 2268.744 kb on - strand at 2268.744 kb on - strand at 2268.744 kb on - strand at 2268.744 kb on - strand at 2268.753 kb on + strand at 2268.764 kb on - strand at 2268.858 kb on - strand at 2268.885 kb on - strand at 2268.931 kb on + strand at 2268.932 kb on - strand at 2268.950 kb on + strand, within CA264_09775 at 2268.963 kb on + strand, within CA264_09775 at 2268.963 kb on + strand, within CA264_09775 at 2268.964 kb on - strand, within CA264_09775 at 2268.964 kb on - strand, within CA264_09775 at 2268.989 kb on + strand, within CA264_09775 at 2268.989 kb on + strand, within CA264_09775 at 2268.990 kb on - strand, within CA264_09775 at 2268.990 kb on - strand, within CA264_09775 at 2268.990 kb on - strand, within CA264_09775 at 2268.991 kb on + strand, within CA264_09775 at 2268.991 kb on + strand, within CA264_09775 at 2268.992 kb on - strand, within CA264_09775 at 2269.020 kb on + strand, within CA264_09775 at 2269.145 kb on - strand, within CA264_09775 at 2269.161 kb on + strand, within CA264_09775 at 2269.177 kb on - strand, within CA264_09775
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 2,266,979 + +1.1 2,266,979 + -0.9 2,266,989 - -1.5 2,266,993 + -1.0 2,266,993 + +0.0 2,267,051 + +0.7 2,267,111 - +0.6 2,267,125 + -0.2 2,267,148 + +1.2 2,267,155 + -2.2 2,267,184 + +0.1 2,267,209 + -1.8 2,267,217 + -0.8 2,267,252 + CA264_09765 0.13 -1.9 2,267,258 - CA264_09765 0.14 -0.3 2,267,400 - CA264_09765 0.37 +0.1 2,267,409 + CA264_09765 0.38 -0.7 2,267,428 - CA264_09765 0.41 -0.0 2,267,528 + CA264_09765 0.57 -0.6 2,267,528 + CA264_09765 0.57 -0.8 2,267,528 + CA264_09765 0.57 -1.1 2,267,528 + CA264_09765 0.57 -0.4 2,267,529 - CA264_09765 0.57 -0.1 2,267,529 - CA264_09765 0.57 +0.7 2,267,529 - CA264_09765 0.57 +0.8 2,267,539 - CA264_09765 0.59 -0.3 2,267,539 - CA264_09765 0.59 +0.2 2,267,664 + CA264_09765 0.78 -0.5 2,267,768 + -0.3 2,267,789 - -0.4 2,267,867 + +2.8 2,267,867 + -0.3 2,267,897 + -0.4 2,267,897 + +0.6 2,267,955 + CA264_09770 0.12 -0.5 2,268,066 - CA264_09770 0.43 -0.2 2,268,075 - CA264_09770 0.46 +0.2 2,268,126 + CA264_09770 0.60 -0.8 2,268,126 + CA264_09770 0.60 -0.9 2,268,127 - CA264_09770 0.61 -0.8 2,268,143 + CA264_09770 0.65 -1.0 2,268,147 + CA264_09770 0.66 -1.5 2,268,170 - CA264_09770 0.73 -0.4 2,268,176 + CA264_09770 0.75 -1.1 2,268,176 + CA264_09770 0.75 -1.1 2,268,251 + -0.8 2,268,263 - -0.6 2,268,313 - +0.2 2,268,331 - -0.8 2,268,334 - -1.3 2,268,354 - -0.7 2,268,438 - -1.5 2,268,507 + -0.4 2,268,507 + -1.3 2,268,507 + -0.1 2,268,507 + -2.4 2,268,507 + -1.8 2,268,508 - -0.4 2,268,508 - +0.0 2,268,509 + -0.4 2,268,509 + -0.7 2,268,509 + -1.2 2,268,510 - -0.8 2,268,510 - +0.2 2,268,510 - -0.5 2,268,548 + -1.5 2,268,575 - -2.2 2,268,578 + -0.0 2,268,579 - -1.1 2,268,582 + -1.5 2,268,582 + -0.3 2,268,596 + +1.0 2,268,596 + +0.4 2,268,597 - -0.5 2,268,606 + -2.0 2,268,661 - -0.2 2,268,716 - -0.5 2,268,730 + -0.6 2,268,730 + -0.9 2,268,731 - -0.5 2,268,731 - +1.4 2,268,731 - -0.4 2,268,731 - -1.6 2,268,731 - -1.3 2,268,732 + +1.3 2,268,733 - +2.9 2,268,733 - -1.3 2,268,733 - +0.5 2,268,741 + +0.1 2,268,743 + -0.6 2,268,744 - -0.6 2,268,744 - +0.9 2,268,744 - -0.9 2,268,744 - -0.5 2,268,753 + -0.3 2,268,764 - +0.7 2,268,858 - -2.0 2,268,885 - +0.9 2,268,931 + -0.4 2,268,932 - -2.6 2,268,950 + CA264_09775 0.11 -1.8 2,268,963 + CA264_09775 0.13 +0.4 2,268,963 + CA264_09775 0.13 -0.6 2,268,964 - CA264_09775 0.13 -1.4 2,268,964 - CA264_09775 0.13 -0.6 2,268,989 + CA264_09775 0.16 -0.1 2,268,989 + CA264_09775 0.16 -0.5 2,268,990 - CA264_09775 0.16 +0.7 2,268,990 - CA264_09775 0.16 -0.2 2,268,990 - CA264_09775 0.16 -0.1 2,268,991 + CA264_09775 0.16 -0.7 2,268,991 + CA264_09775 0.16 -0.6 2,268,992 - CA264_09775 0.16 +0.6 2,269,020 + CA264_09775 0.19 -1.1 2,269,145 - CA264_09775 0.33 -1.4 2,269,161 + CA264_09775 0.35 -1.8 2,269,177 - CA264_09775 0.36 +1.8
Or see this region's nucleotide sequence