Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09160 and CA264_09165 are separated by 142 nucleotides CA264_09165 and CA264_09170 are separated by 168 nucleotides CA264_09170 and CA264_09175 are separated by 1 nucleotides
CA264_09160: CA264_09160 - MBL fold metallo-hydrolase, at 2,147,195 to 2,148,607
_09160
CA264_09165: CA264_09165 - AraC family transcriptional regulator, at 2,148,750 to 2,149,328
_09165
CA264_09170: CA264_09170 - hypothetical protein, at 2,149,497 to 2,149,922
_09170
CA264_09175: CA264_09175 - nuclease PIN, at 2,149,924 to 2,150,787
_09175
Position (kb)
2148
2149
2150 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2147.814 kb on - strand, within CA264_09160 at 2147.872 kb on - strand, within CA264_09160 at 2147.938 kb on + strand, within CA264_09160 at 2147.938 kb on + strand, within CA264_09160 at 2147.938 kb on + strand, within CA264_09160 at 2147.938 kb on + strand, within CA264_09160 at 2147.939 kb on - strand, within CA264_09160 at 2147.939 kb on - strand, within CA264_09160 at 2147.939 kb on - strand, within CA264_09160 at 2147.958 kb on + strand, within CA264_09160 at 2148.282 kb on + strand, within CA264_09160 at 2148.283 kb on - strand, within CA264_09160 at 2148.337 kb on - strand, within CA264_09160 at 2148.337 kb on - strand, within CA264_09160 at 2148.449 kb on + strand, within CA264_09160 at 2148.450 kb on - strand, within CA264_09160 at 2148.453 kb on + strand, within CA264_09160 at 2148.493 kb on + strand at 2148.493 kb on + strand at 2148.494 kb on - strand at 2148.494 kb on - strand at 2148.526 kb on - strand at 2148.543 kb on - strand at 2148.543 kb on - strand at 2148.562 kb on + strand at 2148.565 kb on + strand at 2148.606 kb on - strand at 2148.624 kb on + strand at 2148.625 kb on - strand at 2148.625 kb on - strand at 2148.633 kb on + strand at 2148.647 kb on + strand at 2148.670 kb on - strand at 2148.670 kb on - strand at 2148.670 kb on - strand at 2148.674 kb on + strand at 2148.674 kb on + strand at 2148.720 kb on + strand at 2148.722 kb on + strand at 2148.722 kb on + strand at 2148.722 kb on + strand at 2148.723 kb on - strand at 2148.749 kb on - strand at 2148.764 kb on + strand at 2148.856 kb on - strand, within CA264_09165 at 2148.865 kb on + strand, within CA264_09165 at 2148.907 kb on + strand, within CA264_09165 at 2148.953 kb on - strand, within CA264_09165 at 2148.998 kb on + strand, within CA264_09165 at 2148.999 kb on - strand, within CA264_09165 at 2149.000 kb on + strand, within CA264_09165 at 2149.000 kb on + strand, within CA264_09165 at 2149.000 kb on + strand, within CA264_09165 at 2149.001 kb on - strand, within CA264_09165 at 2149.001 kb on - strand, within CA264_09165 at 2149.001 kb on - strand, within CA264_09165 at 2149.004 kb on + strand, within CA264_09165 at 2149.004 kb on + strand, within CA264_09165 at 2149.004 kb on + strand, within CA264_09165 at 2149.007 kb on - strand, within CA264_09165 at 2149.033 kb on + strand, within CA264_09165 at 2149.257 kb on + strand, within CA264_09165 at 2149.258 kb on - strand, within CA264_09165 at 2149.356 kb on + strand at 2149.356 kb on + strand at 2149.356 kb on + strand at 2149.381 kb on + strand at 2149.412 kb on - strand at 2149.462 kb on - strand at 2149.463 kb on + strand at 2149.463 kb on + strand at 2149.464 kb on - strand at 2149.464 kb on - strand at 2149.464 kb on - strand at 2149.473 kb on + strand at 2149.478 kb on - strand at 2149.492 kb on + strand at 2149.517 kb on + strand at 2149.517 kb on + strand at 2149.517 kb on + strand at 2149.518 kb on - strand at 2149.518 kb on - strand at 2149.550 kb on - strand, within CA264_09170 at 2149.633 kb on - strand, within CA264_09170 at 2149.637 kb on - strand, within CA264_09170 at 2149.637 kb on - strand, within CA264_09170 at 2149.637 kb on - strand, within CA264_09170 at 2149.650 kb on - strand, within CA264_09170 at 2149.802 kb on + strand, within CA264_09170 at 2149.806 kb on + strand, within CA264_09170 at 2149.806 kb on + strand, within CA264_09170 at 2149.806 kb on + strand, within CA264_09170 at 2149.807 kb on - strand, within CA264_09170 at 2149.807 kb on - strand, within CA264_09170 at 2149.807 kb on - strand, within CA264_09170 at 2149.825 kb on + strand, within CA264_09170 at 2149.828 kb on + strand, within CA264_09170 at 2149.828 kb on + strand, within CA264_09170 at 2149.828 kb on + strand, within CA264_09170 at 2149.885 kb on + strand at 2149.885 kb on + strand at 2149.885 kb on + strand at 2149.921 kb on - strand at 2149.940 kb on - strand at 2149.981 kb on - strand at 2150.092 kb on - strand, within CA264_09175 at 2150.153 kb on - strand, within CA264_09175 at 2150.192 kb on + strand, within CA264_09175 at 2150.233 kb on + strand, within CA264_09175
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 2,147,814 - CA264_09160 0.44 +0.8 2,147,872 - CA264_09160 0.48 +0.6 2,147,938 + CA264_09160 0.53 +0.2 2,147,938 + CA264_09160 0.53 +1.5 2,147,938 + CA264_09160 0.53 +0.4 2,147,938 + CA264_09160 0.53 -0.6 2,147,939 - CA264_09160 0.53 +0.2 2,147,939 - CA264_09160 0.53 -0.2 2,147,939 - CA264_09160 0.53 -1.3 2,147,958 + CA264_09160 0.54 -0.6 2,148,282 + CA264_09160 0.77 +1.2 2,148,283 - CA264_09160 0.77 +0.2 2,148,337 - CA264_09160 0.81 +0.0 2,148,337 - CA264_09160 0.81 -0.3 2,148,449 + CA264_09160 0.89 -0.7 2,148,450 - CA264_09160 0.89 -1.3 2,148,453 + CA264_09160 0.89 -0.5 2,148,493 + +0.5 2,148,493 + +0.7 2,148,494 - +0.5 2,148,494 - -0.7 2,148,526 - +1.8 2,148,543 - +0.3 2,148,543 - -0.5 2,148,562 + +0.3 2,148,565 + +0.9 2,148,606 - +0.2 2,148,624 + +0.8 2,148,625 - -2.0 2,148,625 - +0.2 2,148,633 + -0.9 2,148,647 + -0.4 2,148,670 - -1.1 2,148,670 - -0.4 2,148,670 - -1.0 2,148,674 + +0.9 2,148,674 + +1.9 2,148,720 + +0.4 2,148,722 + +0.2 2,148,722 + +2.3 2,148,722 + -0.7 2,148,723 - +0.9 2,148,749 - -0.7 2,148,764 + -0.4 2,148,856 - CA264_09165 0.18 +0.3 2,148,865 + CA264_09165 0.20 +0.7 2,148,907 + CA264_09165 0.27 +0.5 2,148,953 - CA264_09165 0.35 -0.7 2,148,998 + CA264_09165 0.43 -0.4 2,148,999 - CA264_09165 0.43 +0.2 2,149,000 + CA264_09165 0.43 +0.9 2,149,000 + CA264_09165 0.43 +0.6 2,149,000 + CA264_09165 0.43 -0.3 2,149,001 - CA264_09165 0.43 +1.2 2,149,001 - CA264_09165 0.43 -0.6 2,149,001 - CA264_09165 0.43 +0.4 2,149,004 + CA264_09165 0.44 -0.6 2,149,004 + CA264_09165 0.44 +1.7 2,149,004 + CA264_09165 0.44 +0.4 2,149,007 - CA264_09165 0.44 +1.7 2,149,033 + CA264_09165 0.49 +0.8 2,149,257 + CA264_09165 0.88 +0.5 2,149,258 - CA264_09165 0.88 +0.3 2,149,356 + +0.7 2,149,356 + -0.5 2,149,356 + +0.3 2,149,381 + -0.9 2,149,412 - -0.7 2,149,462 - +0.3 2,149,463 + +0.3 2,149,463 + +2.3 2,149,464 - -0.3 2,149,464 - -1.0 2,149,464 - +0.5 2,149,473 + -1.1 2,149,478 - -0.1 2,149,492 + +0.0 2,149,517 + -0.1 2,149,517 + +0.0 2,149,517 + -1.7 2,149,518 - -0.4 2,149,518 - -0.1 2,149,550 - CA264_09170 0.12 -2.2 2,149,633 - CA264_09170 0.32 +0.6 2,149,637 - CA264_09170 0.33 +0.3 2,149,637 - CA264_09170 0.33 +1.2 2,149,637 - CA264_09170 0.33 -2.0 2,149,650 - CA264_09170 0.36 -1.1 2,149,802 + CA264_09170 0.72 -0.6 2,149,806 + CA264_09170 0.73 -1.0 2,149,806 + CA264_09170 0.73 -1.2 2,149,806 + CA264_09170 0.73 -0.1 2,149,807 - CA264_09170 0.73 +1.2 2,149,807 - CA264_09170 0.73 +1.5 2,149,807 - CA264_09170 0.73 +0.6 2,149,825 + CA264_09170 0.77 +0.8 2,149,828 + CA264_09170 0.78 -2.2 2,149,828 + CA264_09170 0.78 -0.7 2,149,828 + CA264_09170 0.78 -0.2 2,149,885 + -0.7 2,149,885 + +0.9 2,149,885 + -0.6 2,149,921 - -0.8 2,149,940 - +0.8 2,149,981 - +1.2 2,150,092 - CA264_09175 0.19 -0.3 2,150,153 - CA264_09175 0.27 -0.6 2,150,192 + CA264_09175 0.31 -1.1 2,150,233 + CA264_09175 0.36 -1.0
Or see this region's nucleotide sequence