Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09125 and CA264_09130 are separated by 205 nucleotides CA264_09130 and CA264_09135 are separated by 228 nucleotides
CA264_09125: CA264_09125 - glucose/galactose MFS transporter, at 2,137,037 to 2,138,455
_09125
CA264_09130: CA264_09130 - hypothetical protein, at 2,138,661 to 2,140,955
_09130
CA264_09135: CA264_09135 - peptidase S8 and S53 subtilisin kexin sedolisin, at 2,141,184 to 2,142,713
_09135
Position (kb)
2138
2139
2140
2141 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2137.684 kb on + strand, within CA264_09125 at 2137.780 kb on + strand, within CA264_09125 at 2137.780 kb on + strand, within CA264_09125 at 2137.967 kb on - strand, within CA264_09125 at 2137.967 kb on - strand, within CA264_09125 at 2137.967 kb on - strand, within CA264_09125 at 2137.970 kb on + strand, within CA264_09125 at 2137.970 kb on + strand, within CA264_09125 at 2138.012 kb on - strand, within CA264_09125 at 2138.030 kb on - strand, within CA264_09125 at 2138.080 kb on - strand, within CA264_09125 at 2138.080 kb on - strand, within CA264_09125 at 2138.099 kb on - strand, within CA264_09125 at 2138.155 kb on + strand, within CA264_09125 at 2138.317 kb on + strand at 2138.318 kb on - strand at 2138.402 kb on + strand at 2138.402 kb on + strand at 2138.407 kb on + strand at 2138.408 kb on - strand at 2138.408 kb on - strand at 2138.408 kb on - strand at 2138.408 kb on - strand at 2138.411 kb on + strand at 2138.412 kb on - strand at 2138.412 kb on - strand at 2138.412 kb on - strand at 2138.415 kb on - strand at 2138.453 kb on + strand at 2138.453 kb on + strand at 2138.465 kb on + strand at 2138.543 kb on + strand at 2138.544 kb on - strand at 2138.601 kb on + strand at 2138.602 kb on - strand at 2138.602 kb on - strand at 2138.676 kb on + strand at 2138.677 kb on - strand at 2138.677 kb on - strand at 2138.706 kb on - strand at 2138.850 kb on + strand at 2138.850 kb on + strand at 2138.851 kb on - strand at 2138.852 kb on + strand at 2138.852 kb on + strand at 2138.852 kb on + strand at 2138.852 kb on + strand at 2138.853 kb on - strand at 2138.867 kb on + strand at 2138.867 kb on + strand at 2138.868 kb on - strand at 2138.868 kb on - strand at 2138.892 kb on + strand, within CA264_09130 at 2138.893 kb on - strand, within CA264_09130 at 2138.904 kb on + strand, within CA264_09130 at 2138.930 kb on - strand, within CA264_09130 at 2139.006 kb on + strand, within CA264_09130 at 2139.006 kb on + strand, within CA264_09130 at 2139.007 kb on - strand, within CA264_09130 at 2139.007 kb on - strand, within CA264_09130 at 2139.009 kb on + strand, within CA264_09130 at 2139.010 kb on - strand, within CA264_09130 at 2139.183 kb on - strand, within CA264_09130 at 2139.271 kb on + strand, within CA264_09130 at 2139.296 kb on - strand, within CA264_09130 at 2139.403 kb on + strand, within CA264_09130 at 2139.404 kb on - strand, within CA264_09130 at 2139.877 kb on + strand, within CA264_09130 at 2139.878 kb on - strand, within CA264_09130 at 2139.907 kb on + strand, within CA264_09130 at 2139.908 kb on - strand, within CA264_09130 at 2139.920 kb on - strand, within CA264_09130 at 2139.920 kb on - strand, within CA264_09130 at 2139.925 kb on - strand, within CA264_09130 at 2139.960 kb on + strand, within CA264_09130 at 2139.961 kb on - strand, within CA264_09130 at 2139.961 kb on - strand, within CA264_09130 at 2139.961 kb on - strand, within CA264_09130 at 2139.961 kb on - strand, within CA264_09130 at 2140.053 kb on + strand, within CA264_09130 at 2140.053 kb on + strand, within CA264_09130 at 2140.054 kb on - strand, within CA264_09130 at 2140.101 kb on + strand, within CA264_09130 at 2140.102 kb on - strand, within CA264_09130 at 2140.103 kb on + strand, within CA264_09130 at 2140.103 kb on + strand, within CA264_09130 at 2140.113 kb on - strand, within CA264_09130 at 2140.199 kb on + strand, within CA264_09130 at 2140.234 kb on - strand, within CA264_09130 at 2140.301 kb on - strand, within CA264_09130 at 2140.421 kb on + strand, within CA264_09130 at 2140.590 kb on + strand, within CA264_09130 at 2140.591 kb on - strand, within CA264_09130 at 2140.639 kb on - strand, within CA264_09130 at 2140.695 kb on + strand, within CA264_09130 at 2140.696 kb on - strand, within CA264_09130 at 2140.756 kb on - strand at 2140.791 kb on - strand at 2140.792 kb on + strand at 2140.793 kb on - strand at 2140.793 kb on - strand at 2140.886 kb on - strand at 2140.987 kb on - strand at 2140.990 kb on + strand at 2141.017 kb on + strand at 2141.017 kb on + strand at 2141.078 kb on + strand at 2141.080 kb on + strand at 2141.083 kb on + strand at 2141.083 kb on + strand at 2141.084 kb on - strand at 2141.209 kb on + strand at 2141.224 kb on + strand at 2141.419 kb on + strand, within CA264_09135 at 2141.420 kb on - strand, within CA264_09135 at 2141.420 kb on - strand, within CA264_09135 at 2141.453 kb on - strand, within CA264_09135 at 2141.468 kb on + strand, within CA264_09135 at 2141.598 kb on + strand, within CA264_09135 at 2141.599 kb on - strand, within CA264_09135 at 2141.639 kb on + strand, within CA264_09135 at 2141.812 kb on + strand, within CA264_09135 at 2141.813 kb on - strand, within CA264_09135 at 2141.833 kb on + strand, within CA264_09135 at 2141.834 kb on - strand, within CA264_09135
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 2,137,684 + CA264_09125 0.46 -1.8 2,137,780 + CA264_09125 0.52 +0.1 2,137,780 + CA264_09125 0.52 +0.9 2,137,967 - CA264_09125 0.66 +0.7 2,137,967 - CA264_09125 0.66 -0.2 2,137,967 - CA264_09125 0.66 -1.8 2,137,970 + CA264_09125 0.66 -1.9 2,137,970 + CA264_09125 0.66 +0.9 2,138,012 - CA264_09125 0.69 -1.0 2,138,030 - CA264_09125 0.70 -1.7 2,138,080 - CA264_09125 0.74 -1.7 2,138,080 - CA264_09125 0.74 -1.7 2,138,099 - CA264_09125 0.75 +0.9 2,138,155 + CA264_09125 0.79 +0.1 2,138,317 + +0.2 2,138,318 - -0.0 2,138,402 + +0.0 2,138,402 + +0.3 2,138,407 + +0.1 2,138,408 - +0.0 2,138,408 - -0.9 2,138,408 - +0.3 2,138,408 - +0.0 2,138,411 + +0.5 2,138,412 - -1.1 2,138,412 - -1.5 2,138,412 - -0.0 2,138,415 - -0.7 2,138,453 + -1.2 2,138,453 + -1.4 2,138,465 + -0.4 2,138,543 + -1.8 2,138,544 - +1.1 2,138,601 + -0.2 2,138,602 - +0.7 2,138,602 - -1.0 2,138,676 + +0.2 2,138,677 - -0.5 2,138,677 - -0.5 2,138,706 - +0.7 2,138,850 + +0.0 2,138,850 + +0.3 2,138,851 - -0.7 2,138,852 + -2.6 2,138,852 + -0.7 2,138,852 + +0.1 2,138,852 + -0.4 2,138,853 - +1.2 2,138,867 + +1.7 2,138,867 + +0.3 2,138,868 - -0.8 2,138,868 - -0.7 2,138,892 + CA264_09130 0.10 +0.5 2,138,893 - CA264_09130 0.10 +0.5 2,138,904 + CA264_09130 0.11 +0.0 2,138,930 - CA264_09130 0.12 -0.7 2,139,006 + CA264_09130 0.15 -0.3 2,139,006 + CA264_09130 0.15 -0.5 2,139,007 - CA264_09130 0.15 -0.4 2,139,007 - CA264_09130 0.15 -0.9 2,139,009 + CA264_09130 0.15 -1.7 2,139,010 - CA264_09130 0.15 -0.8 2,139,183 - CA264_09130 0.23 +0.4 2,139,271 + CA264_09130 0.27 -0.5 2,139,296 - CA264_09130 0.28 +1.3 2,139,403 + CA264_09130 0.32 -0.7 2,139,404 - CA264_09130 0.32 -0.2 2,139,877 + CA264_09130 0.53 +1.9 2,139,878 - CA264_09130 0.53 -0.8 2,139,907 + CA264_09130 0.54 -3.1 2,139,908 - CA264_09130 0.54 +2.5 2,139,920 - CA264_09130 0.55 +0.4 2,139,920 - CA264_09130 0.55 -1.0 2,139,925 - CA264_09130 0.55 +1.7 2,139,960 + CA264_09130 0.57 +0.3 2,139,961 - CA264_09130 0.57 +2.5 2,139,961 - CA264_09130 0.57 +0.3 2,139,961 - CA264_09130 0.57 -0.4 2,139,961 - CA264_09130 0.57 -0.6 2,140,053 + CA264_09130 0.61 -0.7 2,140,053 + CA264_09130 0.61 +0.0 2,140,054 - CA264_09130 0.61 +1.7 2,140,101 + CA264_09130 0.63 -1.4 2,140,102 - CA264_09130 0.63 -0.6 2,140,103 + CA264_09130 0.63 -0.4 2,140,103 + CA264_09130 0.63 -0.7 2,140,113 - CA264_09130 0.63 -0.5 2,140,199 + CA264_09130 0.67 -0.7 2,140,234 - CA264_09130 0.69 -0.1 2,140,301 - CA264_09130 0.71 -0.5 2,140,421 + CA264_09130 0.77 +0.9 2,140,590 + CA264_09130 0.84 -1.0 2,140,591 - CA264_09130 0.84 -0.1 2,140,639 - CA264_09130 0.86 -1.0 2,140,695 + CA264_09130 0.89 -0.3 2,140,696 - CA264_09130 0.89 +0.1 2,140,756 - -0.4 2,140,791 - +0.3 2,140,792 + -0.9 2,140,793 - -0.3 2,140,793 - +0.1 2,140,886 - -0.2 2,140,987 - +0.1 2,140,990 + -0.1 2,141,017 + +0.0 2,141,017 + -0.8 2,141,078 + -0.8 2,141,080 + -1.0 2,141,083 + +0.7 2,141,083 + +0.7 2,141,084 - +1.7 2,141,209 + -0.7 2,141,224 + -1.7 2,141,419 + CA264_09135 0.15 -3.0 2,141,420 - CA264_09135 0.15 +1.2 2,141,420 - CA264_09135 0.15 +1.7 2,141,453 - CA264_09135 0.18 +0.3 2,141,468 + CA264_09135 0.19 +0.6 2,141,598 + CA264_09135 0.27 +2.3 2,141,599 - CA264_09135 0.27 +0.8 2,141,639 + CA264_09135 0.30 -0.1 2,141,812 + CA264_09135 0.41 +0.9 2,141,813 - CA264_09135 0.41 -0.6 2,141,833 + CA264_09135 0.42 -0.3 2,141,834 - CA264_09135 0.42 -2.7
Or see this region's nucleotide sequence