Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08495 and CA264_08500 are separated by 3 nucleotides CA264_08500 and CA264_08505 are separated by 237 nucleotides CA264_08505 and CA264_08510 are separated by 198 nucleotides
CA264_08495: CA264_08495 - PAS domain-containing sensor histidine kinase, at 1,973,853 to 1,974,941
_08495
CA264_08500: CA264_08500 - hypothetical protein, at 1,974,945 to 1,975,409
_08500
CA264_08505: CA264_08505 - glycosyl transferase family 2, at 1,975,647 to 1,977,290
_08505
CA264_08510: CA264_08510 - thiol oxidoreductase, at 1,977,489 to 1,978,190
_08510
Position (kb)
1975
1976
1977
1978 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1974.923 kb on + strand at 1974.923 kb on + strand at 1974.924 kb on - strand at 1974.995 kb on + strand, within CA264_08500 at 1974.996 kb on - strand, within CA264_08500 at 1975.018 kb on + strand, within CA264_08500 at 1975.254 kb on + strand, within CA264_08500 at 1975.255 kb on - strand, within CA264_08500 at 1975.320 kb on + strand, within CA264_08500 at 1975.320 kb on + strand, within CA264_08500 at 1975.360 kb on - strand, within CA264_08500 at 1975.387 kb on + strand at 1975.387 kb on + strand at 1975.462 kb on - strand at 1975.468 kb on + strand at 1975.469 kb on - strand at 1975.472 kb on - strand at 1975.535 kb on + strand at 1975.597 kb on - strand at 1975.649 kb on - strand at 1975.713 kb on - strand at 1975.734 kb on - strand at 1975.734 kb on - strand at 1975.960 kb on - strand, within CA264_08505 at 1976.046 kb on + strand, within CA264_08505 at 1976.156 kb on - strand, within CA264_08505 at 1976.171 kb on + strand, within CA264_08505 at 1976.363 kb on + strand, within CA264_08505 at 1976.409 kb on + strand, within CA264_08505 at 1976.440 kb on + strand, within CA264_08505 at 1976.440 kb on + strand, within CA264_08505 at 1976.440 kb on + strand, within CA264_08505 at 1976.557 kb on + strand, within CA264_08505 at 1976.557 kb on + strand, within CA264_08505 at 1976.575 kb on + strand, within CA264_08505 at 1976.575 kb on + strand, within CA264_08505 at 1976.598 kb on + strand, within CA264_08505 at 1976.880 kb on + strand, within CA264_08505 at 1976.938 kb on + strand, within CA264_08505 at 1976.942 kb on - strand, within CA264_08505 at 1977.088 kb on + strand, within CA264_08505 at 1977.234 kb on - strand at 1977.290 kb on + strand at 1977.290 kb on + strand at 1977.443 kb on + strand at 1977.445 kb on + strand at 1977.547 kb on - strand at 1977.597 kb on + strand, within CA264_08510 at 1977.598 kb on - strand, within CA264_08510 at 1977.598 kb on - strand, within CA264_08510 at 1977.599 kb on + strand, within CA264_08510 at 1977.600 kb on - strand, within CA264_08510 at 1977.672 kb on + strand, within CA264_08510 at 1977.677 kb on + strand, within CA264_08510 at 1977.712 kb on + strand, within CA264_08510 at 1977.713 kb on - strand, within CA264_08510 at 1977.928 kb on + strand, within CA264_08510 at 1978.072 kb on - strand, within CA264_08510 at 1978.078 kb on + strand, within CA264_08510 at 1978.174 kb on + strand at 1978.175 kb on - strand at 1978.200 kb on + strand at 1978.200 kb on + strand at 1978.201 kb on - strand at 1978.202 kb on + strand at 1978.202 kb on + strand at 1978.203 kb on - strand at 1978.203 kb on - strand at 1978.206 kb on + strand at 1978.206 kb on + strand at 1978.207 kb on - strand at 1978.207 kb on - strand at 1978.207 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 1,974,923 + +0.4 1,974,923 + -0.0 1,974,924 - -0.4 1,974,995 + CA264_08500 0.11 -0.1 1,974,996 - CA264_08500 0.11 +0.1 1,975,018 + CA264_08500 0.16 -1.6 1,975,254 + CA264_08500 0.66 -1.9 1,975,255 - CA264_08500 0.67 +0.2 1,975,320 + CA264_08500 0.81 +0.5 1,975,320 + CA264_08500 0.81 +2.2 1,975,360 - CA264_08500 0.89 -0.9 1,975,387 + +0.9 1,975,387 + +0.4 1,975,462 - -1.5 1,975,468 + -0.8 1,975,469 - -1.2 1,975,472 - -0.2 1,975,535 + -0.3 1,975,597 - -0.4 1,975,649 - -0.0 1,975,713 - +0.1 1,975,734 - +0.5 1,975,734 - +0.1 1,975,960 - CA264_08505 0.19 -1.2 1,976,046 + CA264_08505 0.24 -0.2 1,976,156 - CA264_08505 0.31 -0.6 1,976,171 + CA264_08505 0.32 -0.6 1,976,363 + CA264_08505 0.44 -1.9 1,976,409 + CA264_08505 0.46 +1.0 1,976,440 + CA264_08505 0.48 -1.7 1,976,440 + CA264_08505 0.48 +0.1 1,976,440 + CA264_08505 0.48 -2.7 1,976,557 + CA264_08505 0.55 +0.3 1,976,557 + CA264_08505 0.55 -0.8 1,976,575 + CA264_08505 0.56 -0.3 1,976,575 + CA264_08505 0.56 -0.3 1,976,598 + CA264_08505 0.58 -0.4 1,976,880 + CA264_08505 0.75 +1.8 1,976,938 + CA264_08505 0.79 -1.1 1,976,942 - CA264_08505 0.79 -0.4 1,977,088 + CA264_08505 0.88 -1.3 1,977,234 - -0.4 1,977,290 + -0.6 1,977,290 + +0.4 1,977,443 + -0.7 1,977,445 + -0.1 1,977,547 - +0.5 1,977,597 + CA264_08510 0.15 +0.1 1,977,598 - CA264_08510 0.16 -0.5 1,977,598 - CA264_08510 0.16 -1.7 1,977,599 + CA264_08510 0.16 -0.3 1,977,600 - CA264_08510 0.16 -1.1 1,977,672 + CA264_08510 0.26 +0.4 1,977,677 + CA264_08510 0.27 +0.2 1,977,712 + CA264_08510 0.32 -0.3 1,977,713 - CA264_08510 0.32 -0.2 1,977,928 + CA264_08510 0.63 +0.3 1,978,072 - CA264_08510 0.83 +0.6 1,978,078 + CA264_08510 0.84 +0.7 1,978,174 + +0.7 1,978,175 - +0.8 1,978,200 + -0.8 1,978,200 + -0.3 1,978,201 - -0.3 1,978,202 + +0.8 1,978,202 + +0.2 1,978,203 - +0.9 1,978,203 - -0.4 1,978,206 + -0.6 1,978,206 + -0.6 1,978,207 - -0.1 1,978,207 - -1.0 1,978,207 - +0.6
Or see this region's nucleotide sequence