Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07635 and CA264_07640 are separated by 6 nucleotides CA264_07640 and CA264_07645 are separated by 273 nucleotides CA264_07645 and CA264_07650 are separated by 187 nucleotides CA264_07650 and CA264_07655 are separated by 103 nucleotides
CA264_07635: CA264_07635 - SOS mutagenesis and repair protein UmuC, at 1,772,685 to 1,773,998
_07635
CA264_07640: CA264_07640 - hypothetical protein, at 1,774,005 to 1,774,436
_07640
CA264_07645: CA264_07645 - hypothetical protein, at 1,774,710 to 1,775,162
_07645
CA264_07650: CA264_07650 - hypothetical protein, at 1,775,350 to 1,775,766
_07650
CA264_07655: CA264_07655 - endonuclease MutS2, at 1,775,870 to 1,778,263
_07655
Position (kb)
1774
1775
1776 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1773.750 kb on - strand, within CA264_07635 at 1773.767 kb on - strand, within CA264_07635 at 1773.824 kb on - strand, within CA264_07635 at 1773.847 kb on - strand, within CA264_07635 at 1773.955 kb on + strand at 1773.955 kb on + strand at 1773.955 kb on + strand at 1773.955 kb on + strand at 1774.008 kb on + strand at 1774.032 kb on + strand at 1774.080 kb on - strand, within CA264_07640 at 1774.080 kb on - strand, within CA264_07640 at 1774.080 kb on - strand, within CA264_07640 at 1774.136 kb on + strand, within CA264_07640 at 1774.157 kb on + strand, within CA264_07640 at 1774.157 kb on + strand, within CA264_07640 at 1774.203 kb on + strand, within CA264_07640 at 1774.229 kb on + strand, within CA264_07640 at 1774.244 kb on + strand, within CA264_07640 at 1774.244 kb on + strand, within CA264_07640 at 1774.297 kb on + strand, within CA264_07640 at 1774.297 kb on + strand, within CA264_07640 at 1774.298 kb on - strand, within CA264_07640 at 1774.298 kb on - strand, within CA264_07640 at 1774.298 kb on - strand, within CA264_07640 at 1774.298 kb on - strand, within CA264_07640 at 1774.298 kb on - strand, within CA264_07640 at 1774.298 kb on - strand, within CA264_07640 at 1774.388 kb on + strand, within CA264_07640 at 1774.388 kb on + strand, within CA264_07640 at 1774.389 kb on - strand, within CA264_07640 at 1774.389 kb on - strand, within CA264_07640 at 1774.389 kb on - strand, within CA264_07640 at 1774.436 kb on + strand at 1774.437 kb on - strand at 1774.437 kb on - strand at 1774.440 kb on + strand at 1774.441 kb on - strand at 1774.441 kb on - strand at 1774.442 kb on + strand at 1774.442 kb on + strand at 1774.443 kb on - strand at 1774.443 kb on - strand at 1774.443 kb on - strand at 1774.526 kb on + strand at 1774.585 kb on + strand at 1774.625 kb on + strand at 1774.626 kb on - strand at 1774.658 kb on + strand at 1774.666 kb on + strand at 1774.680 kb on + strand at 1774.680 kb on + strand at 1774.689 kb on + strand at 1774.690 kb on - strand at 1774.727 kb on - strand at 1774.851 kb on - strand, within CA264_07645 at 1774.898 kb on + strand, within CA264_07645 at 1774.898 kb on + strand, within CA264_07645 at 1774.898 kb on + strand, within CA264_07645 at 1774.899 kb on - strand, within CA264_07645 at 1774.899 kb on - strand, within CA264_07645 at 1775.024 kb on - strand, within CA264_07645 at 1775.087 kb on - strand, within CA264_07645 at 1775.147 kb on - strand at 1775.151 kb on + strand at 1775.152 kb on - strand at 1775.155 kb on + strand at 1775.155 kb on + strand at 1775.155 kb on + strand at 1775.155 kb on + strand at 1775.155 kb on + strand at 1775.156 kb on - strand at 1775.156 kb on - strand at 1775.156 kb on - strand at 1775.160 kb on + strand at 1775.161 kb on - strand at 1775.247 kb on + strand at 1775.248 kb on - strand at 1775.290 kb on + strand at 1775.290 kb on + strand at 1775.291 kb on - strand at 1775.291 kb on - strand at 1775.291 kb on - strand at 1775.292 kb on + strand at 1775.292 kb on + strand at 1775.293 kb on - strand at 1775.327 kb on + strand at 1775.337 kb on + strand at 1775.338 kb on - strand at 1775.487 kb on + strand, within CA264_07650 at 1775.491 kb on + strand, within CA264_07650 at 1775.491 kb on + strand, within CA264_07650 at 1775.491 kb on + strand, within CA264_07650 at 1775.492 kb on - strand, within CA264_07650 at 1775.494 kb on + strand, within CA264_07650 at 1775.494 kb on + strand, within CA264_07650 at 1775.495 kb on - strand, within CA264_07650 at 1775.526 kb on - strand, within CA264_07650 at 1775.555 kb on - strand, within CA264_07650 at 1775.584 kb on + strand, within CA264_07650 at 1775.585 kb on - strand, within CA264_07650 at 1775.596 kb on + strand, within CA264_07650 at 1775.596 kb on + strand, within CA264_07650 at 1775.597 kb on - strand, within CA264_07650 at 1775.597 kb on - strand, within CA264_07650 at 1775.694 kb on + strand, within CA264_07650 at 1775.726 kb on - strand at 1775.803 kb on - strand at 1775.852 kb on + strand at 1775.866 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 1,773,750 - CA264_07635 0.81 -1.2 1,773,767 - CA264_07635 0.82 -0.2 1,773,824 - CA264_07635 0.87 +0.4 1,773,847 - CA264_07635 0.88 -0.6 1,773,955 + -0.3 1,773,955 + +1.3 1,773,955 + -1.4 1,773,955 + +1.6 1,774,008 + -1.1 1,774,032 + +0.8 1,774,080 - CA264_07640 0.17 -0.5 1,774,080 - CA264_07640 0.17 +0.2 1,774,080 - CA264_07640 0.17 +0.2 1,774,136 + CA264_07640 0.30 +1.6 1,774,157 + CA264_07640 0.35 -0.9 1,774,157 + CA264_07640 0.35 -0.1 1,774,203 + CA264_07640 0.46 -0.1 1,774,229 + CA264_07640 0.52 +0.0 1,774,244 + CA264_07640 0.55 +0.8 1,774,244 + CA264_07640 0.55 -0.6 1,774,297 + CA264_07640 0.68 -0.7 1,774,297 + CA264_07640 0.68 -1.2 1,774,298 - CA264_07640 0.68 -0.1 1,774,298 - CA264_07640 0.68 -0.1 1,774,298 - CA264_07640 0.68 -0.1 1,774,298 - CA264_07640 0.68 -1.2 1,774,298 - CA264_07640 0.68 -1.5 1,774,298 - CA264_07640 0.68 +0.2 1,774,388 + CA264_07640 0.89 +0.5 1,774,388 + CA264_07640 0.89 -0.4 1,774,389 - CA264_07640 0.89 -0.8 1,774,389 - CA264_07640 0.89 -0.6 1,774,389 - CA264_07640 0.89 +0.4 1,774,436 + +0.3 1,774,437 - +0.3 1,774,437 - -1.4 1,774,440 + -0.5 1,774,441 - +1.0 1,774,441 - +0.0 1,774,442 + +0.8 1,774,442 + -0.5 1,774,443 - +0.6 1,774,443 - -0.8 1,774,443 - -0.8 1,774,526 + +0.9 1,774,585 + -0.8 1,774,625 + +0.5 1,774,626 - -1.1 1,774,658 + +0.4 1,774,666 + +0.3 1,774,680 + -0.5 1,774,680 + +0.5 1,774,689 + -1.4 1,774,690 - +0.0 1,774,727 - +1.3 1,774,851 - CA264_07645 0.31 +1.3 1,774,898 + CA264_07645 0.42 -0.8 1,774,898 + CA264_07645 0.42 -1.4 1,774,898 + CA264_07645 0.42 +0.3 1,774,899 - CA264_07645 0.42 -0.2 1,774,899 - CA264_07645 0.42 -0.1 1,775,024 - CA264_07645 0.69 +0.2 1,775,087 - CA264_07645 0.83 +0.5 1,775,147 - -0.0 1,775,151 + -0.1 1,775,152 - -1.2 1,775,155 + +1.8 1,775,155 + -0.2 1,775,155 + -0.9 1,775,155 + -0.4 1,775,155 + -0.7 1,775,156 - -1.6 1,775,156 - +0.8 1,775,156 - -1.5 1,775,160 + +1.2 1,775,161 - -0.7 1,775,247 + +2.0 1,775,248 - +0.0 1,775,290 + +0.2 1,775,290 + +0.1 1,775,291 - +1.2 1,775,291 - +0.7 1,775,291 - -0.7 1,775,292 + -0.2 1,775,292 + +0.1 1,775,293 - +1.8 1,775,327 + +0.6 1,775,337 + -2.2 1,775,338 - +1.8 1,775,487 + CA264_07650 0.33 +0.3 1,775,491 + CA264_07650 0.34 +0.5 1,775,491 + CA264_07650 0.34 -0.4 1,775,491 + CA264_07650 0.34 +0.4 1,775,492 - CA264_07650 0.34 +1.2 1,775,494 + CA264_07650 0.35 +0.7 1,775,494 + CA264_07650 0.35 -1.4 1,775,495 - CA264_07650 0.35 -0.8 1,775,526 - CA264_07650 0.42 +0.3 1,775,555 - CA264_07650 0.49 +1.0 1,775,584 + CA264_07650 0.56 +0.6 1,775,585 - CA264_07650 0.56 -0.8 1,775,596 + CA264_07650 0.59 -0.4 1,775,596 + CA264_07650 0.59 +0.0 1,775,597 - CA264_07650 0.59 +1.0 1,775,597 - CA264_07650 0.59 -0.5 1,775,694 + CA264_07650 0.82 -0.9 1,775,726 - +0.4 1,775,803 - -1.3 1,775,852 + -1.0 1,775,866 + +0.1
Or see this region's nucleotide sequence