Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07540 and CA264_07545 are separated by 96 nucleotides CA264_07545 and CA264_07550 are separated by 181 nucleotides
CA264_07540: CA264_07540 - hypothetical protein, at 1,746,611 to 1,749,013
_07540
CA264_07545: CA264_07545 - pirin family protein, at 1,749,110 to 1,749,829
_07545
CA264_07550: CA264_07550 - transcriptional regulator, at 1,750,011 to 1,750,787
_07550
Position (kb)
1749
1750 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1748.141 kb on - strand, within CA264_07540 at 1748.141 kb on - strand, within CA264_07540 at 1748.148 kb on - strand, within CA264_07540 at 1748.454 kb on + strand, within CA264_07540 at 1748.455 kb on - strand, within CA264_07540 at 1748.613 kb on - strand, within CA264_07540 at 1748.613 kb on - strand, within CA264_07540 at 1748.707 kb on + strand, within CA264_07540 at 1748.734 kb on - strand, within CA264_07540 at 1748.749 kb on + strand, within CA264_07540 at 1748.843 kb on + strand at 1748.846 kb on + strand at 1748.847 kb on - strand at 1748.848 kb on + strand at 1748.848 kb on + strand at 1748.848 kb on + strand at 1748.849 kb on - strand at 1748.849 kb on - strand at 1748.849 kb on - strand at 1748.874 kb on - strand at 1748.874 kb on - strand at 1748.879 kb on + strand at 1748.886 kb on + strand at 1748.886 kb on + strand at 1748.886 kb on + strand at 1748.910 kb on + strand at 1748.911 kb on - strand at 1749.060 kb on + strand at 1749.061 kb on - strand at 1749.261 kb on + strand, within CA264_07545 at 1749.261 kb on + strand, within CA264_07545 at 1749.262 kb on - strand, within CA264_07545 at 1749.262 kb on - strand, within CA264_07545 at 1749.262 kb on - strand, within CA264_07545 at 1749.283 kb on + strand, within CA264_07545 at 1749.292 kb on + strand, within CA264_07545 at 1749.386 kb on + strand, within CA264_07545 at 1749.403 kb on + strand, within CA264_07545 at 1749.442 kb on - strand, within CA264_07545 at 1749.738 kb on + strand, within CA264_07545 at 1749.739 kb on - strand, within CA264_07545 at 1749.846 kb on - strand at 1749.862 kb on - strand at 1749.890 kb on + strand at 1749.945 kb on - strand at 1749.978 kb on + strand at 1750.018 kb on - strand at 1750.826 kb on - strand at 1750.828 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 1,748,141 - CA264_07540 0.64 +1.3 1,748,141 - CA264_07540 0.64 +1.2 1,748,148 - CA264_07540 0.64 +1.6 1,748,454 + CA264_07540 0.77 -0.6 1,748,455 - CA264_07540 0.77 +0.8 1,748,613 - CA264_07540 0.83 -0.0 1,748,613 - CA264_07540 0.83 +0.1 1,748,707 + CA264_07540 0.87 -0.1 1,748,734 - CA264_07540 0.88 -1.6 1,748,749 + CA264_07540 0.89 +1.1 1,748,843 + -1.0 1,748,846 + -0.7 1,748,847 - -0.1 1,748,848 + -0.5 1,748,848 + -1.2 1,748,848 + +0.4 1,748,849 - +0.3 1,748,849 - +0.7 1,748,849 - -1.3 1,748,874 - +0.4 1,748,874 - -0.0 1,748,879 + +2.3 1,748,886 + +2.8 1,748,886 + -0.3 1,748,886 + -0.3 1,748,910 + -1.0 1,748,911 - +0.5 1,749,060 + +0.4 1,749,061 - -0.2 1,749,261 + CA264_07545 0.21 +0.9 1,749,261 + CA264_07545 0.21 +0.2 1,749,262 - CA264_07545 0.21 -1.0 1,749,262 - CA264_07545 0.21 -0.7 1,749,262 - CA264_07545 0.21 -1.7 1,749,283 + CA264_07545 0.24 -1.4 1,749,292 + CA264_07545 0.25 -0.7 1,749,386 + CA264_07545 0.38 +2.1 1,749,403 + CA264_07545 0.41 +2.0 1,749,442 - CA264_07545 0.46 -0.6 1,749,738 + CA264_07545 0.87 +0.5 1,749,739 - CA264_07545 0.87 +0.5 1,749,846 - +1.2 1,749,862 - +1.6 1,749,890 + +0.7 1,749,945 - +1.2 1,749,978 + +0.1 1,750,018 - -0.4 1,750,826 - -1.6 1,750,828 - -0.4
Or see this region's nucleotide sequence