Experiment: m.b. Lomefloxacin 0.004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07305 and CA264_07310 are separated by 80 nucleotides CA264_07310 and CA264_07315 overlap by 4 nucleotides CA264_07315 and CA264_07320 are separated by 134 nucleotides
CA264_07305: CA264_07305 - hypothetical protein, at 1,688,060 to 1,689,325
_07305
CA264_07310: CA264_07310 - two-component sensor histidine kinase, at 1,689,406 to 1,690,668
_07310
CA264_07315: CA264_07315 - DNA-binding response regulator, at 1,690,665 to 1,691,342
_07315
CA264_07320: CA264_07320 - arsenical-resistance protein, at 1,691,477 to 1,692,559
_07320
Position (kb)
1689
1690
1691 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1688.448 kb on + strand, within CA264_07305 at 1688.449 kb on - strand, within CA264_07305 at 1688.449 kb on - strand, within CA264_07305 at 1688.490 kb on + strand, within CA264_07305 at 1688.491 kb on - strand, within CA264_07305 at 1688.611 kb on + strand, within CA264_07305 at 1688.628 kb on - strand, within CA264_07305 at 1688.694 kb on + strand, within CA264_07305 at 1688.694 kb on + strand, within CA264_07305 at 1688.694 kb on + strand, within CA264_07305 at 1688.904 kb on - strand, within CA264_07305 at 1688.904 kb on - strand, within CA264_07305 at 1688.967 kb on + strand, within CA264_07305 at 1688.968 kb on - strand, within CA264_07305 at 1689.014 kb on - strand, within CA264_07305 at 1689.074 kb on + strand, within CA264_07305 at 1689.159 kb on + strand, within CA264_07305 at 1689.159 kb on + strand, within CA264_07305 at 1689.160 kb on - strand, within CA264_07305 at 1689.204 kb on + strand at 1689.227 kb on + strand at 1689.278 kb on - strand at 1689.302 kb on + strand at 1689.309 kb on - strand at 1689.314 kb on + strand at 1689.332 kb on + strand at 1689.359 kb on + strand at 1689.365 kb on + strand at 1689.365 kb on + strand at 1689.366 kb on - strand at 1689.366 kb on - strand at 1689.366 kb on - strand at 1689.368 kb on - strand at 1689.368 kb on - strand at 1689.416 kb on + strand at 1689.416 kb on + strand at 1689.416 kb on + strand at 1689.417 kb on - strand at 1689.420 kb on + strand at 1689.446 kb on + strand at 1689.453 kb on - strand at 1689.464 kb on - strand at 1689.628 kb on + strand, within CA264_07310 at 1689.628 kb on + strand, within CA264_07310 at 1689.628 kb on + strand, within CA264_07310 at 1689.895 kb on + strand, within CA264_07310 at 1689.905 kb on + strand, within CA264_07310 at 1689.905 kb on + strand, within CA264_07310 at 1689.905 kb on + strand, within CA264_07310 at 1689.906 kb on - strand, within CA264_07310 at 1689.906 kb on - strand, within CA264_07310 at 1689.906 kb on - strand, within CA264_07310 at 1689.958 kb on - strand, within CA264_07310 at 1689.980 kb on - strand, within CA264_07310 at 1690.107 kb on + strand, within CA264_07310 at 1690.113 kb on + strand, within CA264_07310 at 1690.113 kb on + strand, within CA264_07310 at 1690.114 kb on - strand, within CA264_07310 at 1690.151 kb on + strand, within CA264_07310 at 1690.178 kb on + strand, within CA264_07310 at 1690.197 kb on - strand, within CA264_07310 at 1690.197 kb on - strand, within CA264_07310 at 1690.211 kb on + strand, within CA264_07310 at 1690.211 kb on + strand, within CA264_07310 at 1690.211 kb on + strand, within CA264_07310 at 1690.211 kb on + strand, within CA264_07310 at 1690.212 kb on - strand, within CA264_07310 at 1690.212 kb on - strand, within CA264_07310 at 1690.310 kb on - strand, within CA264_07310 at 1690.319 kb on + strand, within CA264_07310 at 1690.397 kb on + strand, within CA264_07310 at 1690.398 kb on - strand, within CA264_07310 at 1690.459 kb on + strand, within CA264_07310 at 1690.590 kb on - strand at 1690.590 kb on - strand at 1690.637 kb on + strand at 1690.637 kb on + strand at 1690.637 kb on + strand at 1690.637 kb on + strand at 1690.637 kb on + strand at 1690.640 kb on + strand at 1690.640 kb on + strand at 1690.640 kb on + strand at 1690.682 kb on + strand at 1690.696 kb on + strand at 1690.711 kb on + strand at 1690.711 kb on + strand at 1690.755 kb on - strand, within CA264_07315 at 1690.836 kb on - strand, within CA264_07315 at 1690.839 kb on + strand, within CA264_07315 at 1690.864 kb on + strand, within CA264_07315 at 1690.865 kb on - strand, within CA264_07315 at 1690.957 kb on - strand, within CA264_07315 at 1691.134 kb on + strand, within CA264_07315 at 1691.134 kb on + strand, within CA264_07315 at 1691.187 kb on + strand, within CA264_07315 at 1691.188 kb on - strand, within CA264_07315 at 1691.287 kb on + strand at 1691.328 kb on + strand at 1691.342 kb on + strand at 1691.373 kb on + strand at 1691.503 kb on + strand at 1691.503 kb on + strand at 1691.509 kb on + strand at 1691.509 kb on + strand at 1691.510 kb on - strand at 1691.656 kb on + strand, within CA264_07320
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.004 mM remove 1,688,448 + CA264_07305 0.31 -1.2 1,688,449 - CA264_07305 0.31 +0.2 1,688,449 - CA264_07305 0.31 +1.2 1,688,490 + CA264_07305 0.34 +0.2 1,688,491 - CA264_07305 0.34 -1.4 1,688,611 + CA264_07305 0.44 -0.7 1,688,628 - CA264_07305 0.45 -1.4 1,688,694 + CA264_07305 0.50 -1.1 1,688,694 + CA264_07305 0.50 -0.6 1,688,694 + CA264_07305 0.50 +0.2 1,688,904 - CA264_07305 0.67 +0.4 1,688,904 - CA264_07305 0.67 -0.2 1,688,967 + CA264_07305 0.72 -0.7 1,688,968 - CA264_07305 0.72 +0.6 1,689,014 - CA264_07305 0.75 -1.2 1,689,074 + CA264_07305 0.80 -0.4 1,689,159 + CA264_07305 0.87 -1.1 1,689,159 + CA264_07305 0.87 -0.1 1,689,160 - CA264_07305 0.87 +0.9 1,689,204 + +0.4 1,689,227 + -1.9 1,689,278 - -1.8 1,689,302 + -2.4 1,689,309 - -1.1 1,689,314 + -0.5 1,689,332 + -0.4 1,689,359 + -1.0 1,689,365 + -1.5 1,689,365 + -0.5 1,689,366 - +1.2 1,689,366 - +1.8 1,689,366 - +1.4 1,689,368 - +0.7 1,689,368 - -0.8 1,689,416 + +0.8 1,689,416 + -0.2 1,689,416 + -1.2 1,689,417 - -0.1 1,689,420 + -1.0 1,689,446 + +1.2 1,689,453 - -0.0 1,689,464 - -2.0 1,689,628 + CA264_07310 0.18 -0.8 1,689,628 + CA264_07310 0.18 -2.3 1,689,628 + CA264_07310 0.18 +1.5 1,689,895 + CA264_07310 0.39 -1.5 1,689,905 + CA264_07310 0.40 -0.5 1,689,905 + CA264_07310 0.40 -2.0 1,689,905 + CA264_07310 0.40 +0.1 1,689,906 - CA264_07310 0.40 -1.3 1,689,906 - CA264_07310 0.40 -0.6 1,689,906 - CA264_07310 0.40 +0.1 1,689,958 - CA264_07310 0.44 +0.7 1,689,980 - CA264_07310 0.45 -1.0 1,690,107 + CA264_07310 0.56 +0.1 1,690,113 + CA264_07310 0.56 -1.1 1,690,113 + CA264_07310 0.56 -1.8 1,690,114 - CA264_07310 0.56 -0.3 1,690,151 + CA264_07310 0.59 -0.4 1,690,178 + CA264_07310 0.61 +0.3 1,690,197 - CA264_07310 0.63 +0.7 1,690,197 - CA264_07310 0.63 +1.1 1,690,211 + CA264_07310 0.64 +0.3 1,690,211 + CA264_07310 0.64 -0.4 1,690,211 + CA264_07310 0.64 -0.5 1,690,211 + CA264_07310 0.64 -0.2 1,690,212 - CA264_07310 0.64 +1.4 1,690,212 - CA264_07310 0.64 -0.6 1,690,310 - CA264_07310 0.72 +0.3 1,690,319 + CA264_07310 0.72 +0.5 1,690,397 + CA264_07310 0.78 -0.3 1,690,398 - CA264_07310 0.79 +1.4 1,690,459 + CA264_07310 0.83 -0.9 1,690,590 - -1.7 1,690,590 - +0.6 1,690,637 + +0.9 1,690,637 + -0.5 1,690,637 + -1.1 1,690,637 + -0.6 1,690,637 + -0.5 1,690,640 + -1.3 1,690,640 + +1.5 1,690,640 + -1.8 1,690,682 + +0.7 1,690,696 + -1.0 1,690,711 + +1.3 1,690,711 + -0.4 1,690,755 - CA264_07315 0.13 +0.9 1,690,836 - CA264_07315 0.25 +0.4 1,690,839 + CA264_07315 0.26 +0.3 1,690,864 + CA264_07315 0.29 +0.2 1,690,865 - CA264_07315 0.29 -0.3 1,690,957 - CA264_07315 0.43 +1.5 1,691,134 + CA264_07315 0.69 +1.8 1,691,134 + CA264_07315 0.69 -0.0 1,691,187 + CA264_07315 0.77 -0.9 1,691,188 - CA264_07315 0.77 -0.7 1,691,287 + -0.7 1,691,328 + -0.2 1,691,342 + +1.2 1,691,373 + -0.2 1,691,503 + -0.1 1,691,503 + -1.8 1,691,509 + +0.3 1,691,509 + -0.9 1,691,510 - -0.4 1,691,656 + CA264_07320 0.17 -0.8
Or see this region's nucleotide sequence